version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 55 56.50 0 66830..67321 - 163 152982167 - mma_0055 - hypothetical protein 56 58.13 0 67500..68600 + 366 152981945 - mma_0056 - hypothetical protein 57 54.48 0 68605..70311 - 568 152981065 yjdB mma_0057 - inner membrane protein 58 55.90 0 70430..71674 - 414 152982447 colS1 mma_0058 - two-component system sensor histidine kinase ColS 59 59.94 +1 71664..72347 - 227 152983465 colR1 mma_0059 - two-components system response regulator colR 60 50.49 -1 72436..72639 - 67 152982027 - mma_0060 - hypothetical protein 61 51.97 0 72653..72931 - 92 152982534 - mma_0061 - hypothetical protein 62 57.28 0 73018..74157 - 379 152981054 - mma_0062 - hypothetical protein 63 50.40 -1 74314..74565 - 83 152982415 - mma_0063 - hypothetical protein 64 55.23 0 75081..75893 - 270 152981581 parA1 mma_0064 - chromosome partitioning protein ParA 65 57.59 0 76057..77577 - 506 152982435 - mma_0065 - hypothetical protein 66 56.17 0 77589..79742 - 717 152982643 - mma_0066 - TonB-dependent receptor 67 56.39 0 79771..80208 - 145 152981731 - mma_0067 - hypothetical protein 68 58.06 0 80559..80930 - 123 152982265 - mma_0068 - hypothetical protein 69 55.61 0 81151..81783 + 210 152981400 - mma_0069 - hypothetical protein 70 56.64 0 81841..82269 + 142 152981892 - mma_0070 - hypothetical protein 71 58.50 0 82303..82755 + 150 152982199 - mma_0071 - hypothetical protein 72 52.51 0 82904..83242 + 112 152982434 - mma_0072 - hypothetical protein 73 54.13 0 83320..83622 - 100 152982307 - mma_0073 - hypothetical protein 74 56.04 0 83798..84277 + 159 152981450 creA mma_0074 - CreA protein 75 55.62 0 84302..85315 + 337 152982074 - mma_0075 - hypothetical protein 76 59.82 +1 85330..86571 - 413 152981251 - mma_0076 - hypothetical protein 77 52.01 0 86790..87362 + 190 152980313 tag mma_0077 - DNA-3-methyladenine glycosylase I 78 54.25 0 87982..88416 + 144 152982889 sugE mma_0078 - SugE-like protein 79 50.76 0 88465..88992 - 175 152980894 - mma_0079 - hypothetical protein 80 57.70 0 89265..90971 - 568 152981433 tar3 mma_0080 - methyl-accepting chemotaxis protein 81 53.74 0 91089..91583 - 164 152981612 cheW3 mma_0081 - purine-binding chemotaxis protein CheW 82 56.58 0 92045..93670 + 541 152981138 - mma_0082 - hypothetical protein 83 56.97 0 93861..95561 + 566 152980930 tar4 mma_0083 - methyl-accepting chemotaxis protein 84 54.14 0 95605..96570 - 321 152981076 corA1 mma_0084 - Mg2+/Co2+ transporter 85 57.14 0 96674..97387 - 237 152982890 - mma_0085 - hypothetical protein 86 55.10 0 97511..99136 + 541 152982880 - mma_0086 - Mg-protoporphyrin IX monomethyl ester oxidative cyclase 87 52.20 0 99160..99477 - 105 152982891 - mma_0087 - hypothetical protein 88 57.08 0 99502..101181 + 559 152981082 hvsT mma_0088 - high affinity sulfate transporter 89 55.08 0 101235..102002 - 255 152981366 terC1 mma_0089 - tellurium resistance protein TerC 90 51.65 0 102310..103128 + 272 152982187 - mma_0090 - hypothetical protein 91 56.73 0 103177..103860 - 227 152980892 - mma_0091 - GntR family transcriptional regulator 92 61.92 +1 104042..104821 + 259 152982373 - mma_0092 - hypothetical protein 93 59.00 +1 104811..106049 + 412 152981171 - mma_0093 - alcohol dehydrogenase 94 56.97 0 106240..107394 + 384 152981427 - mma_0094 - major facilitator transporter 95 56.50 0 107391..108098 - 235 152981290 livF1 mma_0095 - ABC-type branched-chain amino acid transport systems, ATPase component 96 55.08 0 108098..108865 - 255 152980928 livG1 mma_0096 - branched-chain amino acid transporter ATP-binding protein 97 55.33 0 108862..109893 - 343 152981595 livM1 mma_0097 - ABC-type branched-chain amino acid transport system, permease component 98 56.01 0 109890..110771 - 293 152981606 livH1 mma_0098 - branched chain amino acid ABC transporter permease 99 53.86 0 110844..112139 - 431 152981674 livK1 mma_0099 - ABC-type branched-chain amino acid transport systems, periplasmic component 100 52.81 0 112380..112682 + 100 152983464 - mma_0100 - hypothetical protein 101 54.73 0 112809..113813 + 334 152980943 tctC1 mma_0101 - tricarboxylate-binding receptor 102 56.80 0 113827..114333 + 168 152982673 tctB1 mma_0102 - small permease component of tripartite tricarboxylate transporter 103 56.99 0 114371..115879 + 502 152981145 tctA1 mma_0103 - tricarboxylate transport protein TctA 104 57.56 0 115876..117534 + 552 152982502 mdcA1 mma_0104 - malonate decarboxylase alpha subunit 105 57.14 0 117541..117855 + 104 152982264 mdcC1 mma_0105 - malonate decarboxylase delta subunit 106 58.56 0 117852..118751 + 299 152982573 mdcD1 mma_0106 - malonate decarboxylase beta subunit 107 56.41 0 118744..119445 + 233 152982699 mdcE1 mma_0107 - malonate decarboxylase gamma subunit 108 60.00 +1 119375..120139 + 254 152982249 mdcG1 mma_0108 - malonate decarboxylase epsilon subunit 109 60.58 +1 120130..120984 + 284 152981577 mdcB1 mma_0109 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 110 60.53 +1 121032..121895 + 287 152982614 mdcH1 mma_0110 - malonyl CoA-ACP transacylase 111 58.94 +1 121922..122698 + 258 152982462 - mma_0111 - GntR family transcriptional regulator 112 55.65 0 122891..123262 + 123 152982140 - mma_0112 - AIG2-related protein 113 57.55 0 123339..125072 + 577 152980236 argS mma_0113 - arginyl-tRNA synthetase 114 56.62 0 125110..125706 + 198 152982022 - mma_0114 - hypothetical protein 115 54.55 0 125721..126380 + 219 152982446 dsbA mma_0115 - thiol:disulfide interchange protein DsbA 116 55.93 0 126466..127257 + 263 152980907 - mma_0116 - short chain dehydrogenase 117 44.13 -2 127306..127935 - 209 152983463 - mma_0117 - hypothetical protein 118 56.24 0 127971..129035 - 354 152981949 - mma_0118 - metallo-beta-lactamase family protein 119 56.59 0 129170..129556 + 128 152981677 - mma_0119 - hypothetical protein 120 56.39 0 129581..130933 + 450 152980665 bioA mma_0120 - adenosylmethionine--8-amino-7-oxononanoate transaminase 121 60.93 +1 130930..132114 + 394 152980090 bioF mma_0121 - 8-amino-7-oxononanoate synthase 122 59.49 +1 132116..132826 + 236 152980701 bioD mma_0122 - dethiobiotin synthetase 123 57.45 0 132869..133888 + 339 152980099 bioB mma_0123 - biotin synthetase 124 57.63 0 133977..134906 + 309 152980111 hmgL mma_0124 - hydroxymethylglutaryl-CoA lyase 125 57.12 0 134995..136869 - 624 152981202 fcbTl1 mma_0125 - TRAP-type mannitol/chloroaromatic compound transport system, large permease component 126 55.90 0 136866..137534 - 222 152980884 fcbTs1 mma_0126 - TRAP-type mannitol/chloroaromatic compound transport system, small permease component 127 54.74 0 137622..138770 - 382 152981268 fcbTp1 mma_0127 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 128 54.17 0 139276..139755 + 159 152982278 - mma_0128 - hypothetical protein 129 57.58 0 139748..140077 + 109 152981820 - mma_0129 - hypothetical protein 130 55.21 0 140095..140382 - 95 152982524 - mma_0130 - hypothetical protein 131 56.08 0 140522..141994 - 490 152980958 - mma_0131 - GntR family transcriptional regulator 132 54.20 0 142233..144599 + 788 152982510 - mma_0132 - formate dehydrogenase oxidoreductase protein 133 59.17 +1 144696..144935 + 79 152983021 - mma_0133 - hypothetical protein 134 50.00 -1 145017..145478 + 153 152982306 - mma_0134 - hypothetical protein 135 60.00 +1 145597..147096 + 499 152981560 ada mma_0135 - methylated-DNA-[protein]-cysteine S-methyltransferase 136 57.98 0 147110..147604 + 164 152981545 ogt1 mma_0136 - methylated-DNA-[protein]-cysteine methyltransferase 137 59.76 +1 147605..148183 - 192 152982325 bcpB mma_0137 - peroxiredoxin 138 53.62 0 148240..148584 - 114 152981953 - mma_0138 - hypothetical protein 139 56.58 0 148759..151404 - 881 152980296 topB mma_0139 - DNA topoisomerase III 140 56.18 0 151644..152120 - 158 152981812 smg mma_0140 - Smg protein 141 61.20 +1 152349..153464 - 371 152980408 smf mma_0141 - DNA processing protein 142 56.19 0 153487..154689 - 400 152982067 - mma_0142 - hypothetical protein 143 55.87 0 154765..155301 + 178 152981308 def1 mma_0143 - polypeptide deformylase 144 58.89 +1 155401..156351 + 316 152979922 fmt mma_0144 - methionyl-tRNA formyltransferase 145 57.25 0 156388..156801 + 137 152982028 - mma_0145 - hypothetical protein 146 55.56 0 156802..157269 - 155 152980927 lrp mma_0146 - Lpr family transcriptional regulator 147 59.10 +1 157377..158618 + 413 152980626 rocD mma_0147 - ornithine aminotransferase 148 60.79 +1 158615..159499 + 294 152981357 - mma_0148 - hypothetical protein 149 54.96 0 159674..163432 + 1252 152980007 metH mma_0149 - B12-dependent methionine synthase 150 55.73 0 163465..164232 - 255 152980966 yafJ mma_0150 - glutamine amidotransferase, class II 151 58.88 +1 164497..165858 + 453 152981600 - mma_0151 - hypothetical protein 152 58.22 0 165866..166540 - 224 152982008 - mma_0152 - tRNA (guanine-N7-)-methyltransferase 153 51.94 0 166620..166877 - 85 152982596 - mma_0153 - hypothetical protein 154 62.57 +1 167062..167427 - 121 152982664 - mma_0154 - hypothetical protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0