version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 32 64.39 0 22276..23418 - 380 114800103 - HNE_0032 - N-acylglucosamine 2-epimerase 33 60.62 0 23546..24124 + 192 114797256 - HNE_0033 - hypothetical protein 34 62.82 0 24240..26420 + 726 114799975 - HNE_0034 - prolyl oligopeptidase 35 63.99 0 26519..27115 + 198 114799210 - HNE_0035 - hypothetical protein 36 63.89 0 27293..28768 + 491 114799508 ffh HNE_0036 - signal recognition particle protein 37 60.58 0 28765..29076 + 103 114800523 - HNE_0037 - chorismate mutase 38 62.61 0 29117..29560 + 147 114799489 rpsP HNE_0038 - ribosomal protein S16 39 51.31 -2 29676..31655 - 659 114798513 - HNE_0039 - acyltransferase family protein 40 64.70 0 31948..32811 + 287 114797587 - HNE_0040 - beta/gamma crystallin family protein 41 63.55 0 32822..33367 + 181 114798866 rimM HNE_0041 - 16S rRNA processing protein RimM 42 70.09 +2 33458..34978 + 506 114798164 - HNE_0042 - beta/gamma crystallin domain-containing protein 43 61.60 0 34988..35737 - 249 114797767 - HNE_0043 - glycosyl transferase, group 2 family protein 44 64.34 0 35891..37696 + 601 114799732 kefC HNE_0044 - glutathione-regulated potassium-efflux system protein KefC 45 63.10 0 37728..38483 + 251 114797793 trmD HNE_0045 - tRNA (guanine-N1)-methyltransferase 46 60.90 0 38470..39024 + 184 114797917 rplS HNE_0046 - 50S ribosomal protein L19 47 63.30 0 39148..40545 + 465 114800168 leuC1 HNE_0047 - isopropylmalate isomerase large subunit 48 61.99 0 40571..41533 + 320 114800485 bioB HNE_0048 - biotin synthase 49 63.21 0 41629..42612 + 327 114799333 cysK HNE_0049 - cysteine synthase A 50 60.56 0 42705..43343 + 212 114798524 - HNE_0050 - glutathione S-transferase 51 63.49 0 43340..44188 + 282 114798233 - HNE_0051 - glyoxalase family protein 52 60.79 0 44200..44829 + 209 114799969 leuD1 HNE_0052 - 3-isopropylmalate dehydratase, small subunit 53 57.63 -1 44952..45272 + 106 114798050 - HNE_0053 - putative lipoprotein 54 59.09 0 45471..45668 + 65 114798012 - HNE_0054 - hypothetical protein 55 57.94 -1 45729..46049 + 106 114797061 - HNE_0055 - putative lipoprotein 56 64.86 0 46142..47194 + 350 114800090 leuB HNE_0056 - 3-isopropylmalate dehydrogenase 57 59.61 0 47276..48466 + 396 114799080 - HNE_0057 - amidohydrolase family protein 58 60.43 0 48521..48889 + 122 114800136 - HNE_0058 - ArsR family transcriptional regulator 59 58.80 0 48886..49419 + 177 114799115 - HNE_0059 - hypothetical protein 60 59.41 0 49416..49787 - 123 114798586 - HNE_0060 - hypothetical protein 61 59.42 0 49913..50947 + 344 114797625 asd HNE_0061 - aspartate-semialdehyde dehydrogenase 62 61.24 0 51015..51512 - 165 114798905 - HNE_0062 - YbaK/prolyl-tRNA synthetase domain-containing protein 63 60.00 0 51575..52309 + 244 114798190 - HNE_0063 - hypothetical protein 64 72.73 +2 52373..52735 - 120 114797533 hisE HNE_0064 - phosphoribosyl-ATP diphosphatase 65 63.38 0 52868..53689 + 273 114798522 - HNE_0065 - enoyl-CoA hydratase 66 67.98 +1 53725..54483 - 252 114797557 hisF HNE_0066 - imidazoleglycerol phosphate synthase, cyclase subunit 67 68.75 +1 54635..54826 + 63 114798515 - HNE_0067 - hypothetical protein 68 64.70 0 54933..55694 + 253 114799626 - HNE_0068 - putative diguanylate cyclase 69 50.95 -2 55978..56187 + 69 114799723 - HNE_0069 - hypothetical protein 70 67.77 +1 56214..56939 - 241 114797166 hisA HNE_0070 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 71 67.93 +1 56936..57568 - 210 114798251 hisH HNE_0071 - imidazoleglycerol phosphate synthase, glutamine amidotransferase subunit 72 62.16 0 57668..58975 + 435 114800187 - HNE_0072 - putative transporter 73 60.29 0 58991..59617 - 208 114799970 hisB HNE_0073 - imidazoleglycerol-phosphate dehydratase 74 63.03 0 59697..61481 + 594 114799436 - HNE_0074 - putative diguanylate cyclase 75 63.39 0 61463..61981 - 172 114798620 - HNE_0075 - putative acetyltransferase 76 61.38 0 61978..62412 - 144 114800214 - HNE_0076 - hypothetical protein 77 62.00 0 62417..62845 - 142 114797338 - HNE_0077 - hypothetical protein 78 63.92 0 62935..63990 - 351 114798208 mclA HNE_0078 - malyl-CoA lyase 79 56.22 -1 64086..64286 + 66 114797180 - HNE_0079 - hypothetical protein 80 64.41 0 64291..65220 - 309 114797932 xerD HNE_0080 - tyrosine recombinase XerD 81 62.03 0 65507..66067 + 186 114800012 aroK HNE_0081 - shikimate kinase 82 64.17 0 66064..67185 + 373 114797725 aroB HNE_0082 - 3-dehydroquinate synthase 83 61.33 0 67214..68488 + 424 114798726 - HNE_0083 - CBS/transporter associated domain-containing protein 84 60.99 0 68495..68776 - 93 114799844 - HNE_0084 - BolA family protein 85 66.51 +1 68808..69431 + 207 114797765 - HNE_0085 - DnaJ domain-containing protein 86 59.57 0 69846..70310 + 154 114798718 - HNE_0086 - spore coat family protein 87 63.14 0 70322..71002 + 226 114799312 - HNE_0087 - hypothetical protein 88 63.69 0 71056..73308 + 750 114800318 - HNE_0088 - fimbrial usher protein 89 59.48 0 73309..73767 + 152 114797879 - HNE_0089 - putative lipoprotein 90 62.32 0 73871..74860 + 329 114798702 - HNE_0090 - putative NADH-quinone oxidoreductase 91 64.34 0 74864..75721 - 285 114799349 - HNE_0091 - putative undecaprenol kinase 92 61.96 0 75961..77406 + 481 114800319 gltD HNE_0092 - putative oxidoreductase 93 61.05 0 77412..81953 + 1513 114798288 gltB HNE_0093 - glutamate synthase, large subunit 94 61.15 0 82002..82889 - 295 114798674 - HNE_0094 - putative lipoprotein 95 58.33 -1 83174..84337 + 387 114799939 - HNE_0095 - aminotransferase, classes I and II 96 60.85 0 84385..85932 - 515 114797697 - HNE_0096 - carboxyl transferase domain-containing protein 97 58.82 0 86041..86346 + 101 114797960 - HNE_0097 - SCP-2 sterol transfer family protein 98 60.17 0 86433..87386 + 317 114799139 - HNE_0098 - alpha/beta fold family hydrolase 99 60.77 0 87421..88878 + 485 114797267 baiB HNE_0099 - bile acid-coenzyme A ligase 100 62.09 0 88934..89938 + 334 114797977 - HNE_0100 - alcohol dehydrogenase, class III 101 58.20 -1 89975..91498 - 507 114798776 - HNE_0101 - amino acid carrier protein 102 59.35 0 91544..91666 - 40 114799575 - HNE_0102 - hypothetical protein 103 61.11 0 91688..93037 + 449 114799640 - HNE_0103 - tRNA-i(6)A37 thiotransferase enzyme MiaB 104 62.33 0 93076..94020 + 314 114800486 - HNE_0104 - PhoH family protein 105 55.19 -1 94031..94483 + 150 114798379 - HNE_0105 - hypothetical protein 106 61.44 0 94489..95349 + 286 114798310 - HNE_0106 - CBS/transporter associated domain-containing protein 107 61.44 0 95356..96999 + 547 114800455 lnt HNE_0107 - apolipoprotein N-acyltransferase 108 57.53 -1 97041..97478 + 145 114799525 - HNE_0108 - DNA-binding protein 109 61.36 0 97510..98169 + 219 114798099 trmB HNE_0109 - tRNA (guanine-N(7))-methyltransferase 110 52.38 -2 98355..98564 + 69 114797127 - HNE_0110 - cold shock DNA-binding protein 111 61.83 0 98773..99372 + 199 114800120 - HNE_0111 - hypothetical protein 112 61.10 0 99369..101147 + 592 114799070 nusA HNE_0112 - transcription termination factor NusA 113 61.57 0 101122..101808 + 228 114798650 - HNE_0113 - hypothetical protein 114 62.72 0 101864..104425 + 853 114797688 infB HNE_0114 - translation initiation factor IF-2 115 62.75 0 104435..104842 + 135 114799473 rbfA HNE_0115 - ribosome-binding factor A 116 62.01 0 105005..105562 + 185 114800142 - HNE_0116 - hypothetical protein 117 64.54 0 105695..106636 + 313 114799976 truB HNE_0117 - tRNA pseudouridine synthase B 118 66.67 +1 106637..106873 - 78 114797236 - HNE_0118 - hypothetical protein 119 61.86 0 107521..108228 - 235 114797682 - HNE_0119 - putative lipoprotein 120 62.28 0 108400..108900 + 166 114800218 msrB1 HNE_0120 - methionine-R-sulfoxide reductase 121 67.94 +1 108966..109358 - 130 114798277 - HNE_0121 - hypothetical protein 122 61.90 0 109355..109690 - 111 114797689 - HNE_0122 - hypothetical protein 123 64.47 0 109703..110338 - 211 114797302 - HNE_0123 - hypothetical protein 124 69.89 +2 110388..110759 - 123 114798871 - HNE_0124 - hypothetical protein 125 61.94 0 110804..111586 - 260 114797825 bdhA HNE_0125 - 3-hydroxybutyrate dehydrogenase 126 61.38 0 111682..112116 + 144 114800450 - HNE_0126 - hypothetical protein 127 66.24 +1 112243..112947 + 234 114799432 - HNE_0127 - hypothetical protein 128 66.67 +1 112944..113813 + 289 114799810 pyrF HNE_0128 - orotidine 5'-phosphate decarboxylase 129 63.93 0 113966..116119 + 717 114797244 adhA HNE_0129 - alcohol dehydrogenase (acceptor) 130 65.00 0 116258..116797 + 179 114798229 - HNE_0130 - hypothetical protein 131 59.39 0 116868..117692 + 274 114797508 - HNE_0131 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.