version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 613 63.06 0 617800..619047 + 415 114798362 - HNE_0618 - aspartate kinase 614 65.26 0 619072..621339 + 755 114798877 ptsP HNE_0619 - phosphoenolpyruvate-protein phosphotransferase PtsP 615 64.21 0 621439..622413 + 324 114799427 - HNE_0620 - hypothetical protein 616 64.22 0 622497..623639 + 380 114797345 ispG HNE_0621 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 617 65.54 0 623649..624182 - 177 114800367 - HNE_0622 - hypothetical protein 618 64.01 0 624182..624784 - 200 114798013 - HNE_0623 - hypothetical protein 619 64.86 0 624799..626178 + 459 114799691 - HNE_0624 - acetyl xylan esterase domain-containing protein 620 59.49 0 626217..626648 + 143 114798918 - HNE_0625 - hypothetical protein 621 63.08 0 626715..627773 + 352 114797902 prfA HNE_0626 - peptide chain release factor 1 622 64.47 0 627770..628588 + 272 114800266 - HNE_0627 - MOSC domain-containing protein 623 63.50 0 628588..629472 + 294 114799445 - HNE_0628 - putative lipoprotein 624 67.13 +1 629469..630326 + 285 114798227 - HNE_0629 - HemK family methyltransferase 625 63.97 0 630546..631325 + 259 114797461 - HNE_0630 - hypothetical protein 626 63.92 0 631509..634127 + 872 114799774 clpB HNE_0631 - ATP-dependent chaperone protein ClpB 627 67.83 +1 634174..635544 - 456 114797465 - HNE_0632 - M23 family peptidase 628 65.36 0 635690..637066 - 458 114799770 - HNE_0633 - M23 family peptidase 629 67.00 +1 637241..640570 + 1109 114798661 - HNE_0634 - hypothetical protein 630 59.38 0 640660..640851 + 63 114799667 - HNE_0635 - putative lipoprotein 631 60.97 0 640879..641229 + 116 114800201 - HNE_0636 - hypothetical protein 632 60.49 0 641355..641597 + 80 114797645 - HNE_0637 - hypothetical protein 633 62.65 0 641708..642355 + 215 114797307 - HNE_0638 - hypothetical protein 634 58.20 -1 642444..642809 + 121 114799911 cheY HNE_0639 - chemotaxis protein CheY 635 64.16 0 642879..643715 + 278 114797580 cheR HNE_0640 - chemotaxis protein methyltransferase 636 66.84 +1 643812..644996 + 394 114798727 trmU HNE_0641 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 637 67.70 +1 645005..646069 - 354 114799325 - HNE_0642 - hypothetical protein 638 59.49 0 646081..646554 - 157 114799104 greA HNE_0643 - transcription elongation factor GreA 639 62.82 0 646624..649902 - 1092 114798818 carB HNE_0644 - carbamoyl-phosphate synthase, large subunit 640 66.92 +1 650025..650420 + 131 114798856 - HNE_0645 - putative lipoprotein 641 61.42 0 650465..650788 + 107 114798318 - HNE_0646 - hypothetical protein 642 60.75 0 650868..652100 + 410 114797333 - HNE_0647 - hypothetical protein 643 61.74 0 652174..652518 - 114 114800337 - HNE_0648 - putative lipoprotein 644 63.54 0 652594..653328 - 244 114799929 - HNE_0649 - metallo-beta-lactamase superfamily protein 645 63.68 0 653440..654411 + 323 114797419 - HNE_0650 - M48 family peptidase 646 62.77 0 654786..655376 + 196 114798400 - HNE_0651 - TetR family transcriptional regulator 647 63.81 0 655476..656666 + 396 114800411 - HNE_0652 - aromatic amino acid aminotransferase 648 59.72 0 656715..657002 - 95 114800365 - HNE_0653 - hypothetical protein 649 64.29 0 657080..658003 - 307 114797914 - HNE_0654 - hypothetical protein 650 60.99 0 658000..658563 - 187 114797229 - HNE_0655 - FUR family transcriptional regulator 651 67.19 +1 658615..658998 + 127 114800409 - HNE_0656 - MarR family transcriptional regulator 652 65.74 0 659030..659890 + 286 114799232 - HNE_0657 - NlpC/P60 family protein 653 63.91 0 659971..660768 - 265 114797971 - HNE_0658 - cytochrome c family protein 654 60.93 0 660931..661767 + 278 114799113 - HNE_0659 - prephenate dehydratase 655 63.41 0 661751..662671 - 306 114800121 - HNE_0660 - LysR family transcriptional regulator 656 59.76 0 662796..663287 + 163 114797703 - HNE_0661 - hypothetical protein 657 54.68 -2 663353..663811 + 152 114797133 - HNE_0662 - YHS domain-containing protein 658 56.14 -1 664050..664277 - 75 114800259 - HNE_0663 - hypothetical protein 659 59.26 0 664382..665299 - 305 114798474 - HNE_0664 - NUDIX family hydrolase 660 61.43 0 665431..667605 + 724 114798026 - HNE_0665 - putative lipoprotein 661 62.77 0 667614..671330 - 1238 114797087 - HNE_0666 - putative localization factor protein PodJ 662 60.21 0 671606..672085 + 159 114799069 - HNE_0667 - MerR family transcriptional regulator 663 61.68 0 672196..673980 + 594 114800213 - HNE_0668 - acyl-CoA dehydrogenase family protein 664 60.03 0 674093..675268 + 391 114799086 - HNE_0669 - acyl-CoA dehydrogenase 665 61.68 0 675276..675716 + 146 114798681 - HNE_0670 - thioesterase family protein 666 63.52 0 675735..676940 + 401 114797516 - HNE_0671 - acetyl-CoA acetyltransferase 667 60.93 0 676970..679201 + 743 114797137 - HNE_0672 - enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase 668 63.96 0 679299..682028 - 909 114800079 - HNE_0673 - ribonuclease 669 63.13 0 682424..683668 + 414 114800021 - HNE_0674 - N-acetylmuramoyl-L-alanine amidase 670 65.89 +1 683559..685487 + 642 114799492 - HNE_0675 - TPR repeat-containing protein 671 67.56 +1 685501..686397 + 298 114798429 ispE HNE_0676 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 672 67.60 +1 686394..687461 + 355 114797664 - HNE_0677 - glycosyl transferase, group 4 family protein 673 64.30 0 687463..688476 - 337 114798232 - HNE_0678 - polyprenyl synthetase 674 63.43 0 688650..689144 + 164 114798516 - HNE_0679 - putative lipoprotein 675 60.39 0 689144..689350 + 68 114799829 - HNE_0680 - hypothetical protein 676 66.40 +1 689347..690090 + 247 114798814 - HNE_0681 - hypothetical protein 677 55.26 -1 690167..690280 + 37 114799568 - HNE_0682 - hypothetical protein 678 63.18 0 690350..691237 + 295 114799009 glyQ HNE_0683 - glycyl-tRNA synthetase subunit alpha 679 63.41 0 691318..691839 + 173 114798015 - HNE_0684 - putative lipoprotein 680 64.55 0 691934..694054 + 706 114797868 glyS HNE_0685 - glycyl-tRNA synthetase, beta subunit 681 63.54 0 694206..696923 + 905 114800443 ppdK HNE_0686 - pyruvate phosphate dikinase 682 65.77 +1 697290..698519 + 409 114797673 - HNE_0687 - hydrolase 683 64.20 0 698604..699413 - 269 114798485 - HNE_0688 - short chain dehydrogenase 684 64.22 0 699469..700326 - 285 114797685 nadC HNE_0689 - nicotinate-nucleotide pyrophosphorylase 685 69.02 +1 700323..701891 - 522 114800426 nadB HNE_0690 - L-aspartate oxidase 686 61.88 0 701875..702354 - 159 114799594 - HNE_0691 - hypothetical protein 687 61.23 0 702423..703433 - 336 114798115 nadA HNE_0692 - quinolinate synthetase complex, A subunit 688 62.38 0 703802..705178 - 458 114799423 - HNE_0693 - hypothetical protein 689 63.13 0 705219..706517 - 432 114799798 - HNE_0694 - amidohydrolase, carboxypeptidase-type 690 63.81 0 707019..708629 - 536 114797080 - HNE_0695 - putative ATP-dependent RNA helicase RhlE 691 60.03 0 708830..709492 - 220 114797796 sodB HNE_0696 - superoxide dismutase, Fe 692 63.03 0 709495..710154 + 219 114799019 - HNE_0697 - hypothetical protein 693 67.97 +1 710286..710822 + 178 114797576 - HNE_0698 - putative lipoprotein 694 64.83 0 710832..711809 - 325 114798797 - HNE_0699 - lipid A biosynthesis acyltransferase 695 67.77 +1 711806..712804 - 332 114799558 lpxK HNE_0700 - tetraacyldisaccharide 4'-kinase 696 68.60 +1 712801..714090 - 429 114799880 kdtA HNE_0701 - 3-deoxy-D-manno-octulosonic-acid transferase 697 65.90 +1 714087..714866 - 259 114797159 - HNE_0702 - hypothetical protein 698 63.17 0 715690..716403 - 237 114797471 gph HNE_0704 - phosphoglycolate phosphatase 699 65.73 0 716484..717869 + 461 114797715 glmU HNE_0705 - UDP-N-acetylglucosamine pyrophosphorylase 700 62.59 0 717870..718580 + 236 114798972 rpiA HNE_0706 - ribose 5-phosphate isomerase A 701 61.98 0 718635..720020 + 461 114799468 gor HNE_0707 - glutathione-disulfide reductase 702 63.23 0 720055..721362 - 435 114800256 - HNE_0708 - nucleotide binding protein 703 63.62 0 721515..722891 + 458 114797431 - HNE_0709 - 3-deoxy-7-phosphoheptulonate synthase 704 65.27 0 722960..723676 + 238 114798192 - HNE_0710 - CAAX amino protease 705 64.90 0 723851..725266 + 471 114798693 - HNE_0711 - MATE efflux family protein 706 57.30 -1 725298..725564 - 88 114799692 hup1 HNE_0712 - DNA-binding protein HU 707 61.29 0 725664..726575 - 303 114800309 - HNE_0713 - hypothetical protein 708 61.68 0 726579..727601 - 340 114799480 - HNE_0714 - L4BD family NADP-dependent oxidoreductase 709 64.83 0 727824..728750 + 308 114798808 - HNE_0715 - Gfo/Idh/MocA family oxidoreductase 710 63.88 0 728752..729468 - 238 114800463 - HNE_0716 - short chain dehydrogenase/reductase family oxidoreductase 711 61.57 0 729490..730941 - 483 114797301 purF HNE_0717 - amidophosphoribosyltransferase 712 66.08 +1 731057..731905 - 282 114798030 - HNE_0718 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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