version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 321 62.87 0 320253..321911 + 552 114798651 - HNE_0325 - putative sulfite reductase 322 61.28 0 321898..322380 + 160 114799901 - HNE_0326 - hypothetical protein 323 63.54 0 322398..323132 + 244 114798004 cysH HNE_0327 - phosphoadenosine phosphosulfate reductase 324 67.41 +1 323239..324048 - 269 114799577 - HNE_0328 - RNA methyltransferase 325 62.76 0 324079..324411 - 110 114800064 - HNE_0329 - hypothetical protein 326 60.65 0 324491..325387 - 298 114797392 rpoH HNE_0330 - RNA polymerase factor sigma-32 327 64.39 0 325779..326921 - 380 114798141 - HNE_0331 - AFG1 family ATPase 328 59.51 0 326937..327551 - 204 114799025 - HNE_0332 - S54 family peptidase 329 62.89 0 327659..328108 - 149 114799030 - HNE_0333 - response regulator receiver domain-containing protein 330 51.85 -2 328188..328322 + 44 114798280 - HNE_0334 - hypothetical protein 331 63.25 0 328339..329244 + 301 114800146 - HNE_0335 - acyltransferase domain-containing protein 332 65.04 0 329316..329807 + 163 114799412 - HNE_0336 - acetyltransferase 333 64.37 0 329928..331277 + 449 114798518 - HNE_0337 - peptide-acetyl-coenzyme A transporter (PAT) family protein 334 66.96 +1 331302..333341 - 679 114797790 - HNE_0338 - hypothetical protein 335 69.69 +2 333338..336214 - 958 114800527 - HNE_0339 - hypothetical protein 336 68.97 +1 336211..337077 - 288 114797646 - HNE_0340 - hypothetical protein 337 66.41 +1 337074..337463 - 129 114798095 - HNE_0341 - putative lipoprotein 338 66.57 +1 337460..338458 - 332 114799543 - HNE_0342 - AAA family ATPase 339 60.03 0 338534..339121 + 195 114798915 - HNE_0343 - hypothetical protein 340 63.62 0 339131..339754 + 207 114799866 - HNE_0344 - NUDIX family hydrolase 341 64.96 0 339839..340189 + 116 114798320 - HNE_0345 - hypothetical protein 342 69.55 +2 340236..341381 + 381 114799278 - HNE_0346 - tRNA nucleotidyltransferase/poly(A) polymerase family protein 343 57.78 -1 341509..341733 + 74 114800278 - HNE_0347 - putative addiction module antidote 344 64.60 0 341730..342116 + 128 114797849 - HNE_0348 - putative addiction module toxin 345 63.53 0 342121..343014 - 297 114798887 hemF HNE_0349 - coproporphyrinogen III oxidase 346 64.36 0 343216..343779 + 187 114798737 petA HNE_0350 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 347 60.64 0 343795..345255 + 486 114797745 - HNE_0351 - putative ubiquinol-cytochrome c reductase, cytochrome b 348 64.27 0 345281..346240 + 319 114797363 - HNE_0352 - putative ubiquinol-cytochrome c reductase, cytochrome c1 349 67.24 +1 346256..346774 + 172 114799462 - HNE_0353 - acetyltransferase 350 66.33 +1 346771..347649 + 292 114798898 mtaP HNE_0354 - methylthioadenosine phosphorylase 351 64.76 0 347721..348719 + 332 114797053 - HNE_0355 - hypothetical protein 352 65.63 0 348691..349173 + 160 114799850 - HNE_0356 - putative lipoprotein 353 64.85 0 349255..349803 - 182 114799643 - HNE_0357 - fasciclin domain-containing protein 354 62.41 0 349930..350493 - 187 114799966 - HNE_0358 - fasciclin domain-containing protein 355 62.36 0 350712..351245 - 177 114800417 - HNE_0359 - fasciclin domain-containing protein 356 66.24 +1 351455..352165 + 236 114797950 - HNE_0360 - DnaJ family molecular chaperone 357 73.33 +2 352256..352540 + 94 114798970 - HNE_0361 - hypothetical protein 358 59.74 0 352622..353560 - 312 114799706 prs HNE_0362 - ribose-phosphate pyrophosphokinase 359 66.27 +1 353684..354448 - 254 114797428 - HNE_0363 - hypothetical protein 360 62.08 0 354630..356462 + 610 114798286 typA HNE_0364 - GTP-binding protein TypA 361 63.73 0 356489..356863 - 124 114799547 - HNE_0365 - putative lipoprotein 362 58.06 -1 357030..357215 + 61 114799103 - HNE_0366 - hypothetical protein 363 67.92 +1 357286..358482 - 398 114799607 - HNE_0367 - hypothetical protein 364 62.90 0 358788..359132 - 114 114799937 - HNE_0368 - hypothetical protein 365 68.29 +1 359705..360382 + 225 114799208 - HNE_0369 - hypothetical protein 366 66.01 +1 360379..360984 - 201 114799985 recR HNE_0370 - recombination protein RecR 367 62.35 0 361108..361431 - 107 114797665 - HNE_0371 - hypothetical protein 368 66.67 +1 361448..363184 - 578 114798398 dnaX HNE_0372 - DNA polymerase III, subunits gamma and tau 369 59.54 0 363300..364337 - 345 114799612 nrdF HNE_0373 - ribonucleotide-diphosphate reductase subunit beta 370 65.35 0 364480..365775 - 431 114800371 - HNE_0374 - hypothetical protein 371 65.16 0 366022..366948 - 308 114797409 - HNE_0375 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 372 57.77 -1 367177..370086 + 969 114800129 - HNE_0376 - PKD domain-containing protein 373 63.00 0 370160..370432 - 90 114797658 - HNE_0377 - TM2 domain-containing protein 374 58.74 0 370629..370994 - 121 114800392 - HNE_0378 - PRC-barrel domain-containing protein 375 65.27 0 371146..372003 + 285 114799616 - HNE_0379 - putative ribosomal protein L11 methyltransferase PrmA 376 60.85 0 372145..372402 + 85 114798858 - HNE_0380 - hypothetical protein 377 65.29 0 372504..374315 + 603 114798047 - HNE_0381 - M24 family peptidase 378 69.56 +2 374437..374886 + 149 114797296 - HNE_0382 - hypothetical protein 379 60.36 0 374970..376094 - 374 114800032 - HNE_0383 - putative alpha-L-fucosidase 380 63.39 0 376116..376847 - 243 114799211 - HNE_0384 - hypothetical protein 381 68.57 +1 376880..378664 + 594 114797433 - HNE_0385 - putative DNA repair protein RecN 382 64.96 0 378661..380766 + 701 114797923 ligA HNE_0386 - DNA ligase, NAD-dependent 383 62.47 0 380786..381619 - 277 114798667 - HNE_0387 - putative competence lipoprotein ComL 384 62.73 0 381843..382274 + 143 114799059 - HNE_0388 - DNA-binding protein 385 64.80 0 382294..383205 - 303 114800236 lpxC HNE_0389 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 386 66.94 +1 383488..384972 - 494 114797115 ftsZ HNE_0390 - cell division protein FtsZ 387 66.44 +1 385096..386391 - 431 114798337 ftsA HNE_0391 - cell division protein FtsA 388 67.58 +1 386391..387263 - 290 114798641 - HNE_0392 - putative cell division protein FtsQ 389 64.82 0 387251..388171 - 306 114799909 - HNE_0393 - D-alanine--D-alanine ligase 390 63.49 0 388448..390490 + 680 114798082 - HNE_0394 - hypothetical protein 391 45.54 -2 390627..391298 + 223 114799295 - HNE_0395 - hypothetical protein 392 44.94 -2 391307..391780 + 157 114800234 - HNE_0396 - hypothetical protein 393 68.21 +1 391893..392864 - 323 114799112 murB HNE_0397 - UDP-N-acetylenolpyruvoylglucosamine reductase 394 67.80 +1 392949..393566 - 205 114800549 - HNE_0398 - hypothetical protein 395 64.50 0 393820..396267 + 815 114797839 - HNE_0399 - putative tyrosine kinase DivL 396 62.25 0 396465..397778 - 437 114800433 - HNE_0400 - sodium/dicarboxylate symporter 397 69.50 +2 397904..400342 + 812 114797192 hrpB HNE_0401 - ATP-dependent helicase HrpB 398 66.67 +1 400364..401806 + 480 114798405 dacB HNE_0402 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 399 61.54 0 401819..402247 - 142 114799648 - HNE_0403 - hypothetical protein 400 56.93 -1 402417..403988 - 523 114799368 - HNE_0404 - amidohydrolase family protein 401 56.79 -1 404087..405220 - 377 114800193 - HNE_0405 - AraC family transcriptional regulator 402 65.90 +1 405333..405980 - 215 114797970 - HNE_0406 - RNA pseudouridine synthase family protein 403 68.98 +1 405977..407401 - 474 114798787 - HNE_0407 - sensor histidine kinase 404 63.67 0 407462..408895 - 477 114800416 - HNE_0408 - pyridine nucleotide-disulfide oxidoreductase 405 66.00 +1 408888..409640 - 250 114799681 - HNE_0409 - hypothetical protein 406 61.26 0 409755..410624 - 289 114798537 - HNE_0410 - hypothetical protein 407 64.88 0 410702..411877 - 391 114799990 - HNE_0411 - beta-lactamase 408 68.89 +1 412071..412205 + 44 114800039 rpmH HNE_0412 - ribosomal protein L34 409 65.57 0 412243..412608 + 121 114798810 rnpA HNE_0413 - ribonuclease P protein component 410 62.00 0 412663..414483 + 606 114798266 - HNE_0414 - inner membrane protein, 60 kDa 411 62.44 0 414487..415149 + 220 114797282 - HNE_0415 - GTPase EngB 412 61.04 0 415186..415647 + 153 114799269 - HNE_0416 - acetyltransferase 413 65.84 +1 415707..415949 + 80 114799999 - HNE_0417 - hypothetical protein 414 63.65 0 416012..416905 + 297 114798995 argB HNE_0418 - acetylglutamate kinase 415 65.21 0 416880..417911 + 343 114797989 - HNE_0419 - hypothetical protein 416 61.96 0 417908..418651 + 247 114797054 - HNE_0420 - pyrimidine 5'-nucleotidase 417 65.22 0 418669..419496 + 275 114799814 dapD HNE_0421 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 418 57.89 -1 419571..419798 + 75 114799481 - HNE_0422 - hypothetical protein 419 62.66 0 419937..420983 + 348 114797704 - HNE_0423 - putative sensor histidine kinase 420 61.00 0 421009..421767 - 252 114800336 - HNE_0424 - hydrolase, alpha/beta fold family protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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