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Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3406 63.43 0 3604300..3604794 - 164 114799034 - HNE_3468 - putative nuclease 3407 58.82 0 3604911..3605789 - 292 114797883 - HNE_3469 - 3-hydroxybutyryl-CoA dehydrogenase 3408 60.75 0 3605943..3606872 - 309 114797076 etfA HNE_3470 - electron transfer flavoprotein, alpha subunit 3409 61.04 0 3606872..3607618 - 248 114799429 eftB HNE_3471 - electron transfer flavoprotein, beta subunit 3410 65.55 0 3607747..3609000 - 417 114800401 - HNE_3472 - putative folylpolyglutamate synthase 3411 62.28 0 3608997..3609977 - 326 114797289 accD HNE_3473 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3412 61.84 0 3610008..3610835 - 275 114798201 trpA HNE_3474 - tryptophan synthase, alpha subunit 3413 58.88 0 3610838..3611158 - 106 114798841 cutA HNE_3475 - divalent-cation tolerance protein CutA 3414 62.05 0 3611155..3612366 - 403 114799821 trpB HNE_3476 - tryptophan synthase subunit beta 3415 63.68 0 3612405..3613040 - 211 114797372 trpF HNE_3477 - N-(5'phosphoribosyl)anthranilate isomerase 3416 60.52 0 3613303..3613953 + 216 114797543 msrA2 HNE_3479 - methionine-S-sulfoxide reductase 3417 64.44 0 3613969..3614958 - 329 114800216 - HNE_3480 - hypothetical protein 3418 63.00 0 3615111..3615956 + 281 114799552 - HNE_3481 - glutamyl-Q tRNA(Asp) synthetase 3419 64.84 0 3615953..3616885 + 310 114797206 - HNE_3482 - putative transporter 3420 64.47 0 3616953..3618542 + 529 114799748 - HNE_3483 - alkaline phosphatase 3421 63.27 0 3618551..3618991 - 146 114799141 - HNE_3484 - hypothetical protein 3422 66.42 +1 3619094..3619909 + 271 114798593 - HNE_3485 - DNA-binding protein 3423 63.40 0 3619995..3621095 + 366 114797810 - HNE_3486 - alcohol dehydrogenase, class III 3424 60.06 0 3621155..3621865 + 236 114799952 - HNE_3487 - hypothetical protein 3425 61.24 0 3621862..3622911 - 349 114799261 pyrD HNE_3488 - dihydroorotate oxidase 3426 64.35 0 3622908..3623252 - 114 114800306 - HNE_3489 - hypothetical protein 3427 69.07 +1 3623297..3625255 - 652 114799277 - HNE_3490 - hypothetical protein 3428 61.92 0 3625430..3626671 + 413 114799175 argG HNE_3491 - argininosuccinate synthase 3429 66.13 +1 3626752..3627315 - 187 114798272 - HNE_3492 - hypothetical protein 3430 65.16 0 3627686..3629677 - 663 114797802 cobT HNE_3493 - cobaltochelatase, CobT subunit 3431 61.28 0 3629708..3630691 - 327 114799817 cobS HNE_3494 - cobaltochelatase, CobS subunit 3432 63.79 0 3630848..3632131 + 427 114799305 - HNE_3495 - hypothetical protein 3433 62.14 0 3632144..3632761 - 205 114798714 msrA3 HNE_3496 - methionine-S-sulfoxide reductase 3434 62.62 0 3632878..3634533 - 551 114799630 - HNE_3497 - putative lipoprotein 3435 58.60 0 3634765..3635049 - 94 114799496 rpmB HNE_3498 - 50S ribosomal protein 3436 64.32 0 3635328..3636221 + 297 114800078 - HNE_3499 - hypothetical protein 3437 66.96 +1 3636243..3637268 - 341 114799098 - HNE_3500 - RluA family pseudouridine synthase 3438 65.66 0 3637362..3639047 + 561 114798024 phoD2 HNE_3501 - alkaline phosphatase 3439 67.33 +1 3639044..3639802 - 252 114797252 - HNE_3502 - oxidoreductase-like protein 3440 55.86 -1 3639910..3640131 - 73 114797747 - HNE_3503 - hypothetical protein 3441 66.08 +1 3640179..3640865 - 228 114799892 - HNE_3504 - GGDEF domain-containing protein 3442 62.82 0 3640875..3641030 - 51 114799300 - HNE_3505 - hypothetical protein 3443 65.05 0 3640999..3641493 + 164 114798773 purE HNE_3506 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 3444 64.17 0 3641490..3642569 + 359 114800267 purK HNE_3507 - phosphoribosylaminoimidazole carboxylase, ATPase subunit 3445 63.23 0 3642574..3643329 + 251 114797561 - HNE_3508 - creatininase 3446 65.16 0 3643428..3644159 + 243 114797705 - HNE_3509 - ABC transporter, ATP-binding protein 3447 62.72 0 3644180..3644914 + 244 114798656 - HNE_3510 - putative ABC transporter, permease protein 3448 65.76 0 3644945..3646813 + 622 114799662 - HNE_3511 - hypothetical protein 3449 66.57 +1 3646810..3647862 + 350 114799832 - HNE_3512 - hypothetical protein 3450 64.51 0 3647863..3648510 - 215 114798088 - HNE_3513 - hypothetical protein 3451 62.25 0 3648618..3651380 - 920 114799040 acnA HNE_3514 - aconitate hydratase 3452 67.87 +1 3651552..3652133 + 193 114800037 ccmA HNE_3515 - heme exporter protein CcmA 3453 68.77 +1 3652130..3652795 + 221 114800180 ccmB HNE_3516 - heme exporter protein CcmB 3454 63.10 0 3652819..3653547 + 242 114800532 ccmC HNE_3517 - heme exporter protein CcmC 3455 66.04 +1 3653551..3653709 + 52 114798547 - HNE_3518 - putative lipoprotein 3456 63.05 0 3653706..3654230 + 174 114799338 - HNE_3519 - putative thiol:disulfide interchange protein 3457 59.94 0 3654253..3654891 - 212 114797467 - HNE_3520 - MarR family transcriptional regulator 3458 56.98 -1 3655083..3655598 + 171 114799173 - HNE_3521 - NUDIX family hydrolase NudH subfamily hydrolase 3459 58.79 0 3655588..3656349 - 253 114798221 - HNE_3522 - putative intracellular septation protein A 3460 67.83 +1 3656429..3657289 - 286 114799708 - HNE_3523 - hypothetical protein 3461 64.00 0 3657579..3658442 + 287 114797795 - HNE_3524 - hypothetical protein 3462 64.25 0 3658543..3660282 + 579 114798786 - HNE_3525 - amidohydrolase family protein/D-aminoacylase domain-containing protein 3463 64.26 0 3660286..3661530 - 414 114799634 ftsY HNE_3526 - signal recognition particle-docking protein FtsY 3464 65.10 0 3661527..3662804 - 425 114800325 - HNE_3527 - tRNA-i(6)A37 thiotransferase enzyme MiaB 3465 57.95 -1 3662876..3663334 - 152 114799327 - HNE_3528 - hypothetical protein 3466 62.72 0 3663413..3664222 - 269 114797495 dapF HNE_3529 - diaminopimelate epimerase 3467 60.91 0 3664277..3664693 - 138 114798732 - HNE_3530 - hypothetical protein 3468 62.68 0 3664725..3665777 - 350 114798842 - HNE_3531 - MaoC domain-containing protein 3469 62.96 0 3665825..3666094 - 89 114800343 - HNE_3532 - hypothetical protein 3470 60.34 0 3666180..3666527 - 115 114797794 - HNE_3533 - putative arsenate reductase 3471 63.48 0 3666591..3667469 - 292 114799185 citE HNE_3534 - citrate lyase, beta subunit 3472 65.62 0 3667523..3667999 + 158 114799299 - HNE_3535 - acetyltransferase 3473 66.84 +1 3667992..3669125 + 377 114797143 - HNE_3536 - putative esterase 3474 63.16 0 3669244..3670155 - 303 114798108 rarD HNE_3537 - chloramphenicol-sensitivity protein (RarD) family protein 3475 58.65 0 3670288..3672783 - 831 114799847 - HNE_3538 - TonB-dependent receptor 3476 63.37 0 3673018..3674562 + 514 114798850 - HNE_3539 - sulfotransferase domain-containing protein 3477 58.90 0 3674624..3675640 + 338 114798332 - HNE_3540 - aldo/keto reductase family oxidoreductase 3478 65.04 0 3676640..3679153 - 837 114797355 - HNE_3541 - FtsK/SpoIIIE family protein 3479 61.75 0 3679369..3680730 - 453 114799360 - HNE_3542 - ammonium transporter family protein 3480 67.33 +1 3680977..3682185 + 402 114798374 ubiF HNE_3543 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 3481 62.09 0 3682182..3682487 - 101 114797817 - HNE_3544 - hypothetical protein 3482 62.02 0 3682484..3682741 - 85 114799656 - HNE_3545 - hypothetical protein 3483 65.43 0 3682761..3683405 - 214 114798647 - HNE_3546 - ATP-dependent La family protease 3484 61.71 0 3683446..3684333 - 295 114797202 - HNE_3547 - putative thioredoxin 3485 61.39 0 3684510..3685172 + 220 114798962 - HNE_3548 - LolA family outer membrane lipoprotein carrier protein 3486 62.59 0 3685413..3686222 + 269 114800092 - HNE_3549 - putative exodeoxyribonuclease III 3487 61.43 0 3686223..3686909 - 228 114797342 - HNE_3550 - DNA-binding response regulator 3488 64.69 0 3687010..3687516 + 168 114797650 - HNE_3551 - hypothetical protein 3489 61.88 0 3687513..3688181 - 222 114799476 - HNE_3552 - alanine racemase domain-containing protein 3490 65.33 0 3688228..3688824 + 198 114800255 - HNE_3553 - thiamine monophosphate synthase family protein 3491 61.59 0 3688877..3689329 - 150 114797859 - HNE_3554 - hypothetical protein 3492 64.89 0 3689403..3690638 - 411 114797949 - HNE_3555 - hypothetical protein 3493 59.44 0 3690713..3691141 + 142 114799797 - HNE_3556 - putative lipoprotein 3494 61.92 0 3691192..3693759 + 855 114799286 leuS HNE_3557 - leucyl-tRNA synthetase 3495 62.66 0 3693756..3694229 + 157 114798875 - HNE_3558 - putative lipoprotein 3496 64.53 0 3694229..3695260 + 343 114798351 holA HNE_3559 - DNA polymerase III, delta subunit 3497 63.87 0 3695268..3696233 - 321 114799854 parB HNE_3560 - chromosome partitioning protein ParB 3498 60.59 0 3696230..3697036 - 268 114798917 parA HNE_3561 - chromosome partitioning protein ParA 3499 58.01 -1 3697029..3697652 - 207 114798745 gidB HNE_3562 - methyltransferase GidB 3500 60.72 0 3697656..3699521 - 621 114797761 gidA HNE_3563 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3501 63.20 0 3699586..3700911 - 441 114799625 trmE HNE_3564 - tRNA modification GTPase TrmE 3502 58.63 0 3700924..3702180 - 418 114798602 rho HNE_3565 - transcription termination factor Rho 3503 53.60 -2 3702356..3702799 - 147 114798055 - HNE_3566 - hypothetical protein 3504 58.85 0 3702813..3703886 - 357 114798830 hemH HNE_3567 - ferrochelatase 3505 60.48 0 3703903..3704937 - 344 114800363 hemE HNE_3568 - uroporphyrinogen decarboxylase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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