version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3339 63.69 0 3545242..3546183 - 313 114798739 - HNE_3400 - prephenate dehydrogenase 3340 63.85 0 3546307..3546696 + 129 114797487 - HNE_3401 - hypothetical protein 3341 59.87 0 3546911..3547381 + 156 114800276 - HNE_3402 - hypothetical protein 3342 57.87 -1 3547412..3548002 - 196 114798839 phaR HNE_3403 - polyhydroxyalkanoate synthesis repressor PhaR 3343 60.61 0 3548159..3548884 + 241 114798054 phbB HNE_3404 - acetoacetyl-CoA reductase 3344 66.00 +1 3548996..3549445 - 149 114798676 - HNE_3405 - hypothetical protein 3345 60.44 0 3549445..3550215 - 256 114797885 - HNE_3406 - putative hydroxyacylglutathione hydrolase 3346 68.28 +1 3550272..3551015 + 247 114800073 - HNE_3407 - hypothetical protein 3347 61.74 0 3551080..3551424 + 114 114799395 - HNE_3408 - nitrogen regulatory protein P-II 3348 64.66 0 3551484..3552680 - 398 114798169 - HNE_3409 - M23 family peptidase 3349 64.71 0 3552680..3553345 - 221 114797716 - HNE_3410 - putative lipoprotein 3350 67.27 +1 3553342..3554001 - 219 114797973 - HNE_3411 - hypothetical protein 3351 64.29 0 3554003..3556321 - 772 114799165 - HNE_3412 - subtilase family protein 3352 59.65 0 3556432..3556887 - 151 114798107 - HNE_3413 - hypothetical protein 3353 65.64 0 3557019..3557504 + 161 114800508 - HNE_3414 - pentapeptide repeat-containing protein 3354 67.33 +1 3557539..3560412 + 957 114800036 - HNE_3415 - putative helicase 3355 66.32 +1 3560426..3560713 + 95 114799054 - HNE_3416 - S4 domain-containing protein 3356 64.21 0 3560710..3561156 + 148 114797520 - HNE_3417 - hypothetical protein 3357 56.43 -1 3561255..3561596 + 113 114799500 fdxA HNE_3418 - ferredoxin 3358 59.81 0 3561882..3562406 + 174 114799783 - HNE_3419 - CarD family transcriptional regulator 3359 63.29 0 3562565..3563305 + 246 114797093 - HNE_3420 - hypothetical protein 3360 62.59 0 3563395..3563811 + 138 114797812 - HNE_3421 - hypothetical protein 3361 58.97 0 3563928..3564044 - 38 114798583 - HNE_3422 - hypothetical protein 3362 62.59 0 3564043..3564312 + 89 114799056 - HNE_3423 - hypothetical protein 3363 64.13 0 3564320..3565501 - 393 114800044 - HNE_3424 - alpha/beta fold family hydrolase 3364 58.75 0 3565595..3566011 - 138 114797901 - HNE_3425 - glyoxalase family protein 3365 63.16 0 3566093..3566548 + 151 114798478 soxR HNE_3426 - redox-sensitive transcriptional activator SoxR 3366 62.33 0 3566555..3568123 - 522 114799539 fcs5 HNE_3427 - feruloyl-CoA synthetase 3367 65.61 0 3568322..3569170 + 282 114800268 - HNE_3428 - hypothetical protein 3368 67.60 +1 3569216..3570502 + 428 114799184 proA HNE_3429 - gamma-glutamyl phosphate reductase 3369 63.61 0 3570499..3571086 + 195 114798022 nadD HNE_3430 - nicotinate (nicotinamide) nucleotide adenylyltransferase 3370 63.97 0 3571083..3571823 + 246 114797177 - HNE_3431 - putative molybdopterin biosynthesis protein MoeB 3371 63.67 0 3571899..3572900 + 333 114800369 - HNE_3432 - alpha/beta fold family hydrolase 3372 63.73 0 3572930..3573916 - 328 114798669 gyaR HNE_3433 - glyoxylate reductase 3373 68.57 +1 3574054..3574632 + 192 114797532 - HNE_3434 - hypothetical protein 3374 63.78 0 3574690..3575244 + 184 114800283 fabZ HNE_3435 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 3375 64.59 0 3575314..3576132 + 272 114799930 - HNE_3436 - enoyl-[acyl-carrier-protein] reductase 3376 65.12 0 3576377..3576634 + 85 114798694 - HNE_3437 - hypothetical protein 3377 64.67 0 3576689..3577138 + 149 114799628 - HNE_3438 - hypothetical protein 3378 67.15 +1 3577889..3578716 - 275 114797873 - HNE_3439 - SCP-like extracellular family protein 3379 61.43 0 3578779..3579465 - 228 114800418 - HNE_3440 - putative uridine kinase 3380 60.74 0 3579558..3581699 - 713 114798182 pnpA HNE_3441 - polynucleotide phosphorylase/polyadenylase 3381 54.81 -1 3581768..3582037 - 89 114797457 rpsO HNE_3442 - ribosomal protein S15 3382 62.50 0 3582083..3582202 - 39 114797473 - HNE_3443 - hypothetical protein 3383 61.25 0 3582333..3582701 + 122 114799721 - HNE_3444 - putative lipoprotein 3384 68.79 +1 3582725..3583195 + 156 114799010 - HNE_3445 - hypothetical protein 3385 67.41 +1 3583402..3584340 + 312 114798666 - HNE_3446 - ISHne3, transposase 3386 62.03 0 3585322..3586614 - 430 114799060 mdeA HNE_3448 - methionine gamma-lyase 3387 63.89 0 3586724..3587515 + 263 114798157 - HNE_3449 - thermonuclease family protein 3388 62.27 0 3587521..3588408 - 295 114798150 - HNE_3450 - putative alternative sigma factor RpoH 3389 63.99 0 3588598..3589083 + 161 114798968 - HNE_3451 - hypothetical protein 3390 65.32 0 3589080..3589526 + 148 114799752 - HNE_3452 - hypothetical protein 3391 61.99 0 3589530..3590597 - 355 114797906 - HNE_3453 - citrate synthase 2 3392 66.22 +1 3590675..3591805 + 376 114797889 - HNE_3454 - citrate synthase family protein 3393 62.46 0 3591807..3593780 - 657 114798491 tkt HNE_3455 - transketolase 3394 65.40 0 3593866..3594180 + 104 114799291 - HNE_3456 - hypothetical protein 3395 65.71 0 3594167..3594478 + 103 114800282 - HNE_3457 - hypothetical protein 3396 63.28 0 3594475..3595182 + 235 114800140 - HNE_3458 - hypothetical protein 3397 59.62 0 3595196..3595408 + 70 114800379 - HNE_3459 - hypothetical protein 3398 64.05 0 3595428..3596000 + 190 114797243 - HNE_3460 - putative ATP:cob(I)alamin adenosyltransferase 3399 62.10 0 3596004..3596966 - 320 114798378 - HNE_3461 - metallo-beta-lactamase family protein 3400 67.26 +1 3597034..3599718 - 894 114800374 - HNE_3462 - hypothetical protein 3401 63.14 0 3599697..3600971 - 424 114799974 lysA HNE_3463 - diaminopimelate decarboxylase 3402 64.47 0 3600984..3601211 - 75 114800174 - HNE_3464 - putative lipoprotein 3403 62.52 0 3601452..3602849 - 465 114798021 argH HNE_3465 - argininosuccinate lyase 3404 61.93 0 3602896..3603486 + 196 114799212 - HNE_3466 - putative thiol:disulfide interchange protein 3405 64.18 0 3603811..3604293 + 160 114799390 - HNE_3467 - hypothetical protein 3406 63.43 0 3604300..3604794 - 164 114799034 - HNE_3468 - putative nuclease 3407 58.82 0 3604911..3605789 - 292 114797883 - HNE_3469 - 3-hydroxybutyryl-CoA dehydrogenase 3408 60.75 0 3605943..3606872 - 309 114797076 etfA HNE_3470 - electron transfer flavoprotein, alpha subunit 3409 61.04 0 3606872..3607618 - 248 114799429 eftB HNE_3471 - electron transfer flavoprotein, beta subunit 3410 65.55 0 3607747..3609000 - 417 114800401 - HNE_3472 - putative folylpolyglutamate synthase 3411 62.28 0 3608997..3609977 - 326 114797289 accD HNE_3473 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 3412 61.84 0 3610008..3610835 - 275 114798201 trpA HNE_3474 - tryptophan synthase, alpha subunit 3413 58.88 0 3610838..3611158 - 106 114798841 cutA HNE_3475 - divalent-cation tolerance protein CutA 3414 62.05 0 3611155..3612366 - 403 114799821 trpB HNE_3476 - tryptophan synthase subunit beta 3415 63.68 0 3612405..3613040 - 211 114797372 trpF HNE_3477 - N-(5'phosphoribosyl)anthranilate isomerase 3416 60.52 0 3613303..3613953 + 216 114797543 msrA2 HNE_3479 - methionine-S-sulfoxide reductase 3417 64.44 0 3613969..3614958 - 329 114800216 - HNE_3480 - hypothetical protein 3418 63.00 0 3615111..3615956 + 281 114799552 - HNE_3481 - glutamyl-Q tRNA(Asp) synthetase 3419 64.84 0 3615953..3616885 + 310 114797206 - HNE_3482 - putative transporter 3420 64.47 0 3616953..3618542 + 529 114799748 - HNE_3483 - alkaline phosphatase 3421 63.27 0 3618551..3618991 - 146 114799141 - HNE_3484 - hypothetical protein 3422 66.42 +1 3619094..3619909 + 271 114798593 - HNE_3485 - DNA-binding protein 3423 63.40 0 3619995..3621095 + 366 114797810 - HNE_3486 - alcohol dehydrogenase, class III 3424 60.06 0 3621155..3621865 + 236 114799952 - HNE_3487 - hypothetical protein 3425 61.24 0 3621862..3622911 - 349 114799261 pyrD HNE_3488 - dihydroorotate oxidase 3426 64.35 0 3622908..3623252 - 114 114800306 - HNE_3489 - hypothetical protein 3427 69.07 +1 3623297..3625255 - 652 114799277 - HNE_3490 - hypothetical protein 3428 61.92 0 3625430..3626671 + 413 114799175 argG HNE_3491 - argininosuccinate synthase 3429 66.13 +1 3626752..3627315 - 187 114798272 - HNE_3492 - hypothetical protein 3430 65.16 0 3627686..3629677 - 663 114797802 cobT HNE_3493 - cobaltochelatase, CobT subunit 3431 61.28 0 3629708..3630691 - 327 114799817 cobS HNE_3494 - cobaltochelatase, CobS subunit 3432 63.79 0 3630848..3632131 + 427 114799305 - HNE_3495 - hypothetical protein 3433 62.14 0 3632144..3632761 - 205 114798714 msrA3 HNE_3496 - methionine-S-sulfoxide reductase 3434 62.62 0 3632878..3634533 - 551 114799630 - HNE_3497 - putative lipoprotein 3435 58.60 0 3634765..3635049 - 94 114799496 rpmB HNE_3498 - 50S ribosomal protein 3436 64.32 0 3635328..3636221 + 297 114800078 - HNE_3499 - hypothetical protein 3437 66.96 +1 3636243..3637268 - 341 114799098 - HNE_3500 - RluA family pseudouridine synthase 3438 65.66 0 3637362..3639047 + 561 114798024 phoD2 HNE_3501 - alkaline phosphatase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0