version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3267 60.81 0 3480520..3481065 - 181 114798215 - HNE_3328 - ECF subfamily RNA polymerase sigma factor 3268 59.74 0 3481255..3481788 + 177 114799447 - HNE_3329 - hypothetical protein 3269 63.99 0 3481862..3482497 - 211 114800290 - HNE_3330 - OmpA family protein 3270 61.43 0 3482686..3483849 + 387 114797352 - HNE_3331 - radical SAM protein 3271 64.07 0 3483860..3486091 - 743 114800151 - HNE_3332 - putative transporter 3272 62.27 0 3486211..3486960 + 249 114797851 - HNE_3333 - putative lipoprotein 3273 60.76 0 3486957..3487193 + 78 114798596 - HNE_3334 - hypothetical protein 3274 62.28 0 3487288..3487629 + 113 114798929 - HNE_3335 - ArsC family protein 3275 57.64 -1 3487662..3487949 - 95 114799803 - HNE_3336 - hypothetical protein 3276 66.20 +1 3488106..3488537 + 143 114797390 - HNE_3337 - hypothetical protein 3277 62.28 0 3488534..3490426 + 630 114799796 thiC HNE_3338 - thiamine biosynthesis protein ThiC 3278 46.38 -2 3490490..3491263 + 257 114797060 - HNE_3339 - hypothetical protein 3279 65.54 0 3491365..3491541 - 58 114799404 - HNE_3340 - hypothetical protein 3280 61.60 0 3491745..3492119 - 124 114799045 - HNE_3341 - hypothetical protein 3281 64.23 0 3492226..3492348 + 40 114797325 - HNE_3342 - hypothetical protein 3282 64.97 0 3492323..3493147 - 274 114798061 - HNE_3343 - Ser/Thr protein phosphatase family protein 3283 60.94 0 3493248..3494993 - 581 114800286 - HNE_3344 - putative lipoprotein 3284 59.58 0 3495062..3495781 + 239 114799264 - HNE_3345 - hypothetical protein 3285 58.38 -1 3495903..3496433 - 176 114798630 - HNE_3346 - hypothetical protein 3286 68.15 +1 3496498..3497373 - 291 114799859 - HNE_3347 - chemotaxis MotA protein 3287 64.86 0 3497512..3498783 + 423 114798953 - HNE_3348 - drug:H+ antiporter-1 family protein 3288 64.98 0 3498804..3500108 - 434 114799549 - HNE_3349 - lytic murein transglycosylase 3289 53.17 -2 3500252..3500377 + 41 114798781 rpmJ HNE_3350 - ribosomal protein L36 3290 62.56 0 3500409..3501017 + 202 114797582 - HNE_3351 - HAD family hydrolase 3291 63.87 0 3501087..3501623 + 178 114799283 - HNE_3352 - TPR repeat-containing protein 3292 63.82 0 3501629..3502576 + 315 114799194 - HNE_3353 - alpha/beta fold family hydrolase 3293 59.47 0 3502616..3502879 + 87 114798719 - HNE_3354 - hypothetical protein 3294 63.71 0 3502929..3503435 + 168 114800017 - HNE_3355 - hypothetical protein 3295 64.63 0 3503462..3504346 + 294 114797298 - HNE_3356 - short chain dehydrogenase/reductase family oxidoreductase 3296 63.40 0 3504422..3505309 + 295 114798306 - HNE_3357 - short chain dehydrogenase/reductase family oxidoreductase 3297 62.86 0 3505300..3505614 - 104 114797278 - HNE_3358 - hypothetical protein 3298 60.96 0 3505583..3506545 + 320 114800316 - HNE_3359 - putative transporter 3299 66.28 +1 3506694..3507716 + 340 114797778 - HNE_3360 - NAD-dependent epimerase/dehydratase family protein 3300 57.42 -1 3507891..3508355 + 154 114797311 - HNE_3361 - putative lipoprotein 3301 64.76 0 3508592..3509062 - 156 114798616 - HNE_3362 - hypothetical protein 3302 61.72 0 3509068..3509451 - 127 114798847 - HNE_3363 - hypothetical protein 3303 64.77 0 3509561..3510034 - 157 114799534 - HNE_3364 - MarR family transcriptional regulator 3304 63.90 0 3510290..3511120 + 276 114800244 - HNE_3365 - chloride peroxidase 3305 62.86 0 3511193..3511402 - 69 114797835 - HNE_3366 - hypothetical protein 3306 66.11 +1 3511506..3512399 + 297 114798607 - HNE_3367 - M48B family peptidase 3307 69.34 +1 3512431..3513702 + 423 114799841 - HNE_3368 - putative ribosomal RNA small subunit methyltransferase B 3308 66.05 +1 3513822..3514310 + 162 114798828 - HNE_3369 - putative lipoprotein 3309 62.93 0 3514452..3515120 + 222 114797584 rpe HNE_3370 - ribulose-phosphate 3-epimerase 3310 67.48 +1 3515148..3516875 + 575 114797226 - HNE_3371 - heparinase II/III-like family protein 3311 66.79 +1 3516969..3518558 + 529 114797222 purH HNE_3372 - bifunctional purine biosynthesis protein PurH 3312 47.92 -2 3518642..3518929 + 95 114797976 - HNE_3373 - putative lipoprotein 3313 67.33 +1 3519321..3520220 - 299 114800467 - HNE_3374 - putative hydroxymethylglutaryl-CoA lyase 3314 65.58 0 3520228..3521058 - 276 114797855 - HNE_3375 - enoyl-CoA hydratase 3315 64.90 0 3521179..3521574 + 131 114797571 - HNE_3376 - phosphoribosyl-AMP cyclohydrolase 3316 62.25 0 3521600..3522505 + 301 114799156 - HNE_3377 - metallo-beta-lactamase family lipoprotein 3317 64.66 0 3522495..3524141 - 548 114798755 - HNE_3378 - hypothetical protein 3318 63.26 0 3524229..3525929 - 566 114800342 - HNE_3379 - isobutyryl-CoA dehydrogenase 3319 64.96 0 3526058..3526876 - 272 114799744 - HNE_3380 - short chain dehydrogenase/reductase family oxidoreductase 3320 62.65 0 3527048..3529534 + 828 114798760 - HNE_3381 - TonB-dependent receptor 3321 65.34 0 3529672..3530499 + 275 114799337 - HNE_3382 - alpha/beta fold family hydrolase 3322 63.17 0 3530504..3531475 - 323 114799917 - HNE_3383 - putative cyclase 3323 67.19 +1 3531540..3532487 - 315 114797490 - HNE_3384 - hypothetical protein 3324 68.63 +1 3532547..3533515 + 322 114798838 ada HNE_3385 - ADA regulatory protein 3325 63.62 0 3533598..3534056 + 152 114800513 - HNE_3386 - hypothetical protein 3326 65.40 0 3534053..3534526 + 157 114797712 - HNE_3387 - putative lactoylglutathione lyase 3327 66.67 +1 3534658..3535182 - 174 114798562 hpt HNE_3388 - hypoxanthine phosphoribosyltransferase 3328 64.66 0 3535188..3535934 - 248 114799317 - HNE_3389 - MJ0042 family finger-like domain-containing protein 3329 65.88 +1 3536001..3536759 + 252 114797092 ftsE HNE_3390 - cell division ATP-binding protein FtsE 3330 70.45 +2 3536756..3537628 + 290 114797852 - HNE_3391 - putative permease 3331 61.94 0 3537674..3538414 + 246 114798585 - HNE_3392 - putative 1-acyl-sn-glycerol-3-phosphate acyltransferase 3332 65.58 0 3538411..3539052 + 213 114799381 - HNE_3393 - putative DNA-3-methyladenine glycosylase 3333 62.12 0 3539176..3539769 + 197 114800298 - HNE_3394 - HNH endonuclease domain-containing protein 3334 65.32 0 3539742..3541592 - 616 114800135 - HNE_3395 - dolichyl-phosphate-mannose-protein mannosyltransferase 3335 64.33 0 3541774..3542544 + 256 114799537 - HNE_3396 - glycosyl transferase, group 2 family protein 3336 63.02 0 3542551..3543291 - 246 114798829 - HNE_3397 - SCO1/SenC family protein 3337 65.72 0 3543239..3544606 + 455 114799590 - HNE_3398 - sensor histidine kinase 3338 63.53 0 3544666..3545238 + 190 114797184 regA HNE_3399 - DNA-binding response regulator RegA 3339 63.69 0 3545242..3546183 - 313 114798739 - HNE_3400 - prephenate dehydrogenase 3340 63.85 0 3546307..3546696 + 129 114797487 - HNE_3401 - hypothetical protein 3341 59.87 0 3546911..3547381 + 156 114800276 - HNE_3402 - hypothetical protein 3342 57.87 -1 3547412..3548002 - 196 114798839 phaR HNE_3403 - polyhydroxyalkanoate synthesis repressor PhaR 3343 60.61 0 3548159..3548884 + 241 114798054 phbB HNE_3404 - acetoacetyl-CoA reductase 3344 66.00 +1 3548996..3549445 - 149 114798676 - HNE_3405 - hypothetical protein 3345 60.44 0 3549445..3550215 - 256 114797885 - HNE_3406 - putative hydroxyacylglutathione hydrolase 3346 68.28 +1 3550272..3551015 + 247 114800073 - HNE_3407 - hypothetical protein 3347 61.74 0 3551080..3551424 + 114 114799395 - HNE_3408 - nitrogen regulatory protein P-II 3348 64.66 0 3551484..3552680 - 398 114798169 - HNE_3409 - M23 family peptidase 3349 64.71 0 3552680..3553345 - 221 114797716 - HNE_3410 - putative lipoprotein 3350 67.27 +1 3553342..3554001 - 219 114797973 - HNE_3411 - hypothetical protein 3351 64.29 0 3554003..3556321 - 772 114799165 - HNE_3412 - subtilase family protein 3352 59.65 0 3556432..3556887 - 151 114798107 - HNE_3413 - hypothetical protein 3353 65.64 0 3557019..3557504 + 161 114800508 - HNE_3414 - pentapeptide repeat-containing protein 3354 67.33 +1 3557539..3560412 + 957 114800036 - HNE_3415 - putative helicase 3355 66.32 +1 3560426..3560713 + 95 114799054 - HNE_3416 - S4 domain-containing protein 3356 64.21 0 3560710..3561156 + 148 114797520 - HNE_3417 - hypothetical protein 3357 56.43 -1 3561255..3561596 + 113 114799500 fdxA HNE_3418 - ferredoxin 3358 59.81 0 3561882..3562406 + 174 114799783 - HNE_3419 - CarD family transcriptional regulator 3359 63.29 0 3562565..3563305 + 246 114797093 - HNE_3420 - hypothetical protein 3360 62.59 0 3563395..3563811 + 138 114797812 - HNE_3421 - hypothetical protein 3361 58.97 0 3563928..3564044 - 38 114798583 - HNE_3422 - hypothetical protein 3362 62.59 0 3564043..3564312 + 89 114799056 - HNE_3423 - hypothetical protein 3363 64.13 0 3564320..3565501 - 393 114800044 - HNE_3424 - alpha/beta fold family hydrolase 3364 58.75 0 3565595..3566011 - 138 114797901 - HNE_3425 - glyoxalase family protein 3365 63.16 0 3566093..3566548 + 151 114798478 soxR HNE_3426 - redox-sensitive transcriptional activator SoxR 3366 62.33 0 3566555..3568123 - 522 114799539 fcs5 HNE_3427 - feruloyl-CoA synthetase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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