version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3233 63.14 0 3456904..3457584 + 226 114797618 pspA HNE_3294 - phage shock protein A 3234 65.12 0 3457698..3457955 + 85 114798410 pspB HNE_3295 - phage shock protein B 3235 60.19 0 3457967..3458383 + 138 114798290 pspC HNE_3296 - phage shock protein C 3236 58.06 -1 3458431..3458616 + 61 114797327 - HNE_3297 - hypothetical protein 3237 67.66 +1 3458613..3460433 - 606 114799736 - HNE_3298 - FAD dependent oxidoreductase domain-containing protein 3238 65.62 0 3460578..3460865 + 95 114799528 - HNE_3299 - hypothetical protein 3239 62.65 0 3460891..3461139 + 82 114798729 - HNE_3300 - hypothetical protein 3240 64.16 0 3461136..3461414 + 92 114797501 - HNE_3301 - hypothetical protein 3241 62.00 0 3461419..3461868 + 149 114800294 - HNE_3302 - hypothetical protein 3242 65.12 0 3461923..3462246 + 107 114799919 - HNE_3303 - ArsR family transcriptional regulator 3243 61.64 0 3462243..3462461 + 72 114799160 - HNE_3304 - hypothetical protein 3244 57.98 -1 3462468..3462893 + 141 114798014 - HNE_3305 - hypothetical protein 3245 56.47 -1 3462890..3463291 + 133 114797620 - HNE_3306 - hypothetical protein 3246 63.66 0 3463288..3463686 + 132 114798569 - HNE_3307 - hypothetical protein 3247 67.33 +1 3463731..3464630 + 299 114798167 - HNE_3308 - putative tyrosine recombinase XerC 3248 64.62 0 3464637..3465809 - 390 114797411 - HNE_3309 - putative oxygen-independent coproporphyrinogen III oxidase 3249 61.04 0 3465806..3466462 - 218 114800076 rdgB HNE_3310 - non-canonical purine NTP pyrophosphatase 3250 64.65 0 3466585..3467079 + 164 114799603 - HNE_3311 - hypothetical protein 3251 63.75 0 3467095..3467334 + 79 114799014 - HNE_3312 - DNA-binding protein 3252 56.98 -1 3467388..3468068 + 226 114797623 - HNE_3313 - putative satD protein 3253 56.15 -1 3468055..3468444 + 129 114800112 - HNE_3314 - hypothetical protein 3254 65.29 0 3468445..3469170 - 241 114798422 rph HNE_3315 - ribonuclease PH 3255 64.33 0 3469261..3470931 + 556 114799647 fhs HNE_3316 - formate--tetrahydrofolate ligase 3256 66.76 +1 3470977..3472065 + 362 114800305 hrcA HNE_3317 - heat-inducible transcription repressor 3257 66.14 +1 3472065..3472631 + 188 114797336 grpE HNE_3318 - co-chaperone GrpE 3258 67.54 +1 3472650..3473570 - 306 114797965 - HNE_3319 - hypothetical protein 3259 67.06 +1 3473667..3473918 - 83 114799170 - HNE_3320 - hypothetical protein 3260 61.81 0 3474210..3476105 + 631 114798319 dnaK HNE_3321 - chaperone protein DnaK 3261 65.05 0 3476261..3476878 + 205 114798065 - HNE_3322 - hypothetical protein 3262 62.53 0 3476925..3477914 - 329 114798574 - HNE_3323 - putative quinone oxidoreductase 3263 67.24 +1 3478012..3478884 + 290 114800051 - HNE_3324 - putative asparaginase 3264 62.93 0 3478881..3479201 + 106 114797073 - HNE_3325 - hypothetical protein 3265 62.17 0 3479201..3479734 + 177 114798567 - HNE_3326 - RNA methyltransferase 3266 61.93 0 3479756..3480430 - 224 114799135 - HNE_3327 - ChR family anti-sigma factor 3267 60.81 0 3480520..3481065 - 181 114798215 - HNE_3328 - ECF subfamily RNA polymerase sigma factor 3268 59.74 0 3481255..3481788 + 177 114799447 - HNE_3329 - hypothetical protein 3269 63.99 0 3481862..3482497 - 211 114800290 - HNE_3330 - OmpA family protein 3270 61.43 0 3482686..3483849 + 387 114797352 - HNE_3331 - radical SAM protein 3271 64.07 0 3483860..3486091 - 743 114800151 - HNE_3332 - putative transporter 3272 62.27 0 3486211..3486960 + 249 114797851 - HNE_3333 - putative lipoprotein 3273 60.76 0 3486957..3487193 + 78 114798596 - HNE_3334 - hypothetical protein 3274 62.28 0 3487288..3487629 + 113 114798929 - HNE_3335 - ArsC family protein 3275 57.64 -1 3487662..3487949 - 95 114799803 - HNE_3336 - hypothetical protein 3276 66.20 +1 3488106..3488537 + 143 114797390 - HNE_3337 - hypothetical protein 3277 62.28 0 3488534..3490426 + 630 114799796 thiC HNE_3338 - thiamine biosynthesis protein ThiC 3278 46.38 -2 3490490..3491263 + 257 114797060 - HNE_3339 - hypothetical protein 3279 65.54 0 3491365..3491541 - 58 114799404 - HNE_3340 - hypothetical protein 3280 61.60 0 3491745..3492119 - 124 114799045 - HNE_3341 - hypothetical protein 3281 64.23 0 3492226..3492348 + 40 114797325 - HNE_3342 - hypothetical protein 3282 64.97 0 3492323..3493147 - 274 114798061 - HNE_3343 - Ser/Thr protein phosphatase family protein 3283 60.94 0 3493248..3494993 - 581 114800286 - HNE_3344 - putative lipoprotein 3284 59.58 0 3495062..3495781 + 239 114799264 - HNE_3345 - hypothetical protein 3285 58.38 -1 3495903..3496433 - 176 114798630 - HNE_3346 - hypothetical protein 3286 68.15 +1 3496498..3497373 - 291 114799859 - HNE_3347 - chemotaxis MotA protein 3287 64.86 0 3497512..3498783 + 423 114798953 - HNE_3348 - drug:H+ antiporter-1 family protein 3288 64.98 0 3498804..3500108 - 434 114799549 - HNE_3349 - lytic murein transglycosylase 3289 53.17 -2 3500252..3500377 + 41 114798781 rpmJ HNE_3350 - ribosomal protein L36 3290 62.56 0 3500409..3501017 + 202 114797582 - HNE_3351 - HAD family hydrolase 3291 63.87 0 3501087..3501623 + 178 114799283 - HNE_3352 - TPR repeat-containing protein 3292 63.82 0 3501629..3502576 + 315 114799194 - HNE_3353 - alpha/beta fold family hydrolase 3293 59.47 0 3502616..3502879 + 87 114798719 - HNE_3354 - hypothetical protein 3294 63.71 0 3502929..3503435 + 168 114800017 - HNE_3355 - hypothetical protein 3295 64.63 0 3503462..3504346 + 294 114797298 - HNE_3356 - short chain dehydrogenase/reductase family oxidoreductase 3296 63.40 0 3504422..3505309 + 295 114798306 - HNE_3357 - short chain dehydrogenase/reductase family oxidoreductase 3297 62.86 0 3505300..3505614 - 104 114797278 - HNE_3358 - hypothetical protein 3298 60.96 0 3505583..3506545 + 320 114800316 - HNE_3359 - putative transporter 3299 66.28 +1 3506694..3507716 + 340 114797778 - HNE_3360 - NAD-dependent epimerase/dehydratase family protein 3300 57.42 -1 3507891..3508355 + 154 114797311 - HNE_3361 - putative lipoprotein 3301 64.76 0 3508592..3509062 - 156 114798616 - HNE_3362 - hypothetical protein 3302 61.72 0 3509068..3509451 - 127 114798847 - HNE_3363 - hypothetical protein 3303 64.77 0 3509561..3510034 - 157 114799534 - HNE_3364 - MarR family transcriptional regulator 3304 63.90 0 3510290..3511120 + 276 114800244 - HNE_3365 - chloride peroxidase 3305 62.86 0 3511193..3511402 - 69 114797835 - HNE_3366 - hypothetical protein 3306 66.11 +1 3511506..3512399 + 297 114798607 - HNE_3367 - M48B family peptidase 3307 69.34 +1 3512431..3513702 + 423 114799841 - HNE_3368 - putative ribosomal RNA small subunit methyltransferase B 3308 66.05 +1 3513822..3514310 + 162 114798828 - HNE_3369 - putative lipoprotein 3309 62.93 0 3514452..3515120 + 222 114797584 rpe HNE_3370 - ribulose-phosphate 3-epimerase 3310 67.48 +1 3515148..3516875 + 575 114797226 - HNE_3371 - heparinase II/III-like family protein 3311 66.79 +1 3516969..3518558 + 529 114797222 purH HNE_3372 - bifunctional purine biosynthesis protein PurH 3312 47.92 -2 3518642..3518929 + 95 114797976 - HNE_3373 - putative lipoprotein 3313 67.33 +1 3519321..3520220 - 299 114800467 - HNE_3374 - putative hydroxymethylglutaryl-CoA lyase 3314 65.58 0 3520228..3521058 - 276 114797855 - HNE_3375 - enoyl-CoA hydratase 3315 64.90 0 3521179..3521574 + 131 114797571 - HNE_3376 - phosphoribosyl-AMP cyclohydrolase 3316 62.25 0 3521600..3522505 + 301 114799156 - HNE_3377 - metallo-beta-lactamase family lipoprotein 3317 64.66 0 3522495..3524141 - 548 114798755 - HNE_3378 - hypothetical protein 3318 63.26 0 3524229..3525929 - 566 114800342 - HNE_3379 - isobutyryl-CoA dehydrogenase 3319 64.96 0 3526058..3526876 - 272 114799744 - HNE_3380 - short chain dehydrogenase/reductase family oxidoreductase 3320 62.65 0 3527048..3529534 + 828 114798760 - HNE_3381 - TonB-dependent receptor 3321 65.34 0 3529672..3530499 + 275 114799337 - HNE_3382 - alpha/beta fold family hydrolase 3322 63.17 0 3530504..3531475 - 323 114799917 - HNE_3383 - putative cyclase 3323 67.19 +1 3531540..3532487 - 315 114797490 - HNE_3384 - hypothetical protein 3324 68.63 +1 3532547..3533515 + 322 114798838 ada HNE_3385 - ADA regulatory protein 3325 63.62 0 3533598..3534056 + 152 114800513 - HNE_3386 - hypothetical protein 3326 65.40 0 3534053..3534526 + 157 114797712 - HNE_3387 - putative lactoylglutathione lyase 3327 66.67 +1 3534658..3535182 - 174 114798562 hpt HNE_3388 - hypoxanthine phosphoribosyltransferase 3328 64.66 0 3535188..3535934 - 248 114799317 - HNE_3389 - MJ0042 family finger-like domain-containing protein 3329 65.88 +1 3536001..3536759 + 252 114797092 ftsE HNE_3390 - cell division ATP-binding protein FtsE 3330 70.45 +2 3536756..3537628 + 290 114797852 - HNE_3391 - putative permease 3331 61.94 0 3537674..3538414 + 246 114798585 - HNE_3392 - putative 1-acyl-sn-glycerol-3-phosphate acyltransferase 3332 65.58 0 3538411..3539052 + 213 114799381 - HNE_3393 - putative DNA-3-methyladenine glycosylase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0