version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3190 56.80 -1 3418733..3419026 + 97 114797497 - HNE_3251 - hypothetical protein 3191 61.85 0 3419055..3419303 - 82 114798634 - HNE_3252 - hypothetical protein 3192 64.53 0 3419300..3420187 - 295 114799083 - HNE_3253 - putative FolD bifunctional protein 3193 67.67 +1 3420168..3420467 - 99 114798070 - HNE_3254 - hypothetical protein 3194 59.87 0 3420489..3420797 - 102 114797565 - HNE_3255 - hypothetical protein 3195 66.08 +1 3420990..3422183 + 397 114800188 - HNE_3256 - major facilitator family transporter 3196 66.16 +1 3422336..3423523 + 395 114800147 - HNE_3257 - major facilitator family transporter 3197 67.35 +1 3423520..3424251 - 243 114799477 - HNE_3258 - putative lipoprotein 3198 62.14 0 3424306..3425079 - 257 114798449 - HNE_3259 - short chain dehydrogenase 3199 66.21 +1 3425220..3425870 + 216 114797701 - HNE_3260 - hypothetical protein 3200 62.81 0 3425939..3426301 + 120 114797190 - HNE_3261 - hypothetical protein 3201 62.61 0 3426395..3427798 + 467 114797713 lpdA2 HNE_3262 - dihydrolipoamide dehydrogenase 3202 65.76 0 3427821..3428372 + 183 114798792 - HNE_3263 - acetyltransferase 3203 62.63 0 3428377..3429714 + 445 114799334 - HNE_3264 - hypothetical protein 3204 57.14 -1 3429721..3429951 - 76 114800220 - HNE_3265 - hypothetical protein 3205 66.67 +1 3430013..3430216 - 67 114797838 - HNE_3266 - hypothetical protein 3206 66.67 +1 3430329..3430784 - 151 114798633 dut HNE_3267 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3207 64.96 0 3430830..3432056 - 408 114799868 coaBC HNE_3268 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3208 67.57 +1 3432173..3432505 - 110 114800496 - HNE_3269 - hypothetical protein 3209 60.18 0 3432635..3433081 - 148 114799461 - HNE_3270 - hypothetical protein 3210 65.49 0 3433142..3434665 - 507 114798427 ubiB HNE_3271 - 2-polyprenylphenol 6-hydroxylase 3211 53.25 -2 3434685..3434915 + 76 114800138 - HNE_3272 - hypothetical protein 3212 62.61 0 3434927..3435715 - 262 114800122 ubiE HNE_3273 - ubiquinone/menaquinone biosynthesis methyltransferase UbiE 3213 62.98 0 3435714..3436607 + 297 114799193 mutM HNE_3274 - formamidopyrimidine-DNA glycosylase 3214 68.33 +1 3436604..3437806 - 400 114798759 - HNE_3275 - FAD-dependent oxidoreductase 3215 62.20 0 3437881..3438843 - 320 114797186 - HNE_3276 - hypothetical protein 3216 65.19 0 3438916..3440067 - 383 114800111 - HNE_3277 - putative hydrolase NrgC 3217 64.54 0 3440070..3441809 - 579 114797081 - HNE_3278 - amidohydrolase family protein 3218 63.82 0 3441884..3442234 - 116 114800031 - HNE_3279 - hypothetical protein 3219 65.04 0 3442231..3443337 - 368 114799851 - HNE_3280 - hypothetical protein 3220 65.99 +1 3443354..3444241 - 295 114798845 - HNE_3281 - acyltransferase domain-containing protein 3221 64.51 0 3444241..3445401 - 386 114797258 - HNE_3282 - acyl-CoA dehydrogenase 3222 59.48 0 3445416..3446333 - 305 114799570 metA HNE_3283 - homoserine O-succinyltransferase 3223 62.12 0 3446538..3447350 - 270 114800473 - HNE_3284 - enoyl-CoA hydratase/isomerase domain-containing protein 3224 61.14 0 3447492..3448142 + 216 114797158 - HNE_3285 - ExoD family protein 3225 66.09 +1 3448157..3448504 + 115 114798128 - HNE_3286 - hypothetical protein 3226 64.54 0 3448581..3449519 + 312 114797225 fabK HNE_3287 - trans-2-enoyl-ACP reductase II 3227 61.94 0 3449649..3451829 + 726 114797980 dcp HNE_3288 - peptidyl-dipeptidase 3228 66.67 +1 3451907..3452374 - 155 114799188 - HNE_3289 - sugar phosphotransferase system (PTS),mannose/fructose family protein 3229 58.79 0 3452401..3452997 - 198 114800119 - HNE_3290 - hypothetical protein 3230 61.99 0 3453225..3455342 - 705 114797169 - HNE_3291 - hypothetical protein 3231 65.67 0 3455430..3456536 - 368 114799167 pspF HNE_3292 - psp operon transcription activator 3232 63.54 0 3456687..3456878 + 63 114800010 - HNE_3293 - hypothetical protein 3233 63.14 0 3456904..3457584 + 226 114797618 pspA HNE_3294 - phage shock protein A 3234 65.12 0 3457698..3457955 + 85 114798410 pspB HNE_3295 - phage shock protein B 3235 60.19 0 3457967..3458383 + 138 114798290 pspC HNE_3296 - phage shock protein C 3236 58.06 -1 3458431..3458616 + 61 114797327 - HNE_3297 - hypothetical protein 3237 67.66 +1 3458613..3460433 - 606 114799736 - HNE_3298 - FAD dependent oxidoreductase domain-containing protein 3238 65.62 0 3460578..3460865 + 95 114799528 - HNE_3299 - hypothetical protein 3239 62.65 0 3460891..3461139 + 82 114798729 - HNE_3300 - hypothetical protein 3240 64.16 0 3461136..3461414 + 92 114797501 - HNE_3301 - hypothetical protein 3241 62.00 0 3461419..3461868 + 149 114800294 - HNE_3302 - hypothetical protein 3242 65.12 0 3461923..3462246 + 107 114799919 - HNE_3303 - ArsR family transcriptional regulator 3243 61.64 0 3462243..3462461 + 72 114799160 - HNE_3304 - hypothetical protein 3244 57.98 -1 3462468..3462893 + 141 114798014 - HNE_3305 - hypothetical protein 3245 56.47 -1 3462890..3463291 + 133 114797620 - HNE_3306 - hypothetical protein 3246 63.66 0 3463288..3463686 + 132 114798569 - HNE_3307 - hypothetical protein 3247 67.33 +1 3463731..3464630 + 299 114798167 - HNE_3308 - putative tyrosine recombinase XerC 3248 64.62 0 3464637..3465809 - 390 114797411 - HNE_3309 - putative oxygen-independent coproporphyrinogen III oxidase 3249 61.04 0 3465806..3466462 - 218 114800076 rdgB HNE_3310 - non-canonical purine NTP pyrophosphatase 3250 64.65 0 3466585..3467079 + 164 114799603 - HNE_3311 - hypothetical protein 3251 63.75 0 3467095..3467334 + 79 114799014 - HNE_3312 - DNA-binding protein 3252 56.98 -1 3467388..3468068 + 226 114797623 - HNE_3313 - putative satD protein 3253 56.15 -1 3468055..3468444 + 129 114800112 - HNE_3314 - hypothetical protein 3254 65.29 0 3468445..3469170 - 241 114798422 rph HNE_3315 - ribonuclease PH 3255 64.33 0 3469261..3470931 + 556 114799647 fhs HNE_3316 - formate--tetrahydrofolate ligase 3256 66.76 +1 3470977..3472065 + 362 114800305 hrcA HNE_3317 - heat-inducible transcription repressor 3257 66.14 +1 3472065..3472631 + 188 114797336 grpE HNE_3318 - co-chaperone GrpE 3258 67.54 +1 3472650..3473570 - 306 114797965 - HNE_3319 - hypothetical protein 3259 67.06 +1 3473667..3473918 - 83 114799170 - HNE_3320 - hypothetical protein 3260 61.81 0 3474210..3476105 + 631 114798319 dnaK HNE_3321 - chaperone protein DnaK 3261 65.05 0 3476261..3476878 + 205 114798065 - HNE_3322 - hypothetical protein 3262 62.53 0 3476925..3477914 - 329 114798574 - HNE_3323 - putative quinone oxidoreductase 3263 67.24 +1 3478012..3478884 + 290 114800051 - HNE_3324 - putative asparaginase 3264 62.93 0 3478881..3479201 + 106 114797073 - HNE_3325 - hypothetical protein 3265 62.17 0 3479201..3479734 + 177 114798567 - HNE_3326 - RNA methyltransferase 3266 61.93 0 3479756..3480430 - 224 114799135 - HNE_3327 - ChR family anti-sigma factor 3267 60.81 0 3480520..3481065 - 181 114798215 - HNE_3328 - ECF subfamily RNA polymerase sigma factor 3268 59.74 0 3481255..3481788 + 177 114799447 - HNE_3329 - hypothetical protein 3269 63.99 0 3481862..3482497 - 211 114800290 - HNE_3330 - OmpA family protein 3270 61.43 0 3482686..3483849 + 387 114797352 - HNE_3331 - radical SAM protein 3271 64.07 0 3483860..3486091 - 743 114800151 - HNE_3332 - putative transporter 3272 62.27 0 3486211..3486960 + 249 114797851 - HNE_3333 - putative lipoprotein 3273 60.76 0 3486957..3487193 + 78 114798596 - HNE_3334 - hypothetical protein 3274 62.28 0 3487288..3487629 + 113 114798929 - HNE_3335 - ArsC family protein 3275 57.64 -1 3487662..3487949 - 95 114799803 - HNE_3336 - hypothetical protein 3276 66.20 +1 3488106..3488537 + 143 114797390 - HNE_3337 - hypothetical protein 3277 62.28 0 3488534..3490426 + 630 114799796 thiC HNE_3338 - thiamine biosynthesis protein ThiC 3278 46.38 -2 3490490..3491263 + 257 114797060 - HNE_3339 - hypothetical protein 3279 65.54 0 3491365..3491541 - 58 114799404 - HNE_3340 - hypothetical protein 3280 61.60 0 3491745..3492119 - 124 114799045 - HNE_3341 - hypothetical protein 3281 64.23 0 3492226..3492348 + 40 114797325 - HNE_3342 - hypothetical protein 3282 64.97 0 3492323..3493147 - 274 114798061 - HNE_3343 - Ser/Thr protein phosphatase family protein 3283 60.94 0 3493248..3494993 - 581 114800286 - HNE_3344 - putative lipoprotein 3284 59.58 0 3495062..3495781 + 239 114799264 - HNE_3345 - hypothetical protein 3285 58.38 -1 3495903..3496433 - 176 114798630 - HNE_3346 - hypothetical protein 3286 68.15 +1 3496498..3497373 - 291 114799859 - HNE_3347 - chemotaxis MotA protein 3287 64.86 0 3497512..3498783 + 423 114798953 - HNE_3348 - drug:H+ antiporter-1 family protein 3288 64.98 0 3498804..3500108 - 434 114799549 - HNE_3349 - lytic murein transglycosylase 3289 53.17 -2 3500252..3500377 + 41 114798781 rpmJ HNE_3350 - ribosomal protein L36 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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