version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3165 62.29 0 3392543..3393706 - 387 114798370 - HNE_3225 - acyl-CoA dehydrogenase family protein 3166 59.67 0 3393819..3395690 - 623 114800038 - HNE_3226 - putative lipoprotein 3167 66.15 +1 3395793..3396758 + 321 114797250 hemC HNE_3227 - porphobilinogen deaminase 3168 69.47 +2 3396755..3397468 + 237 114800364 hemD HNE_3228 - uroporphyrinogen-III synthase 3169 67.04 +1 3397538..3398611 + 357 114799645 - HNE_3229 - hypothetical protein 3170 67.29 +1 3398617..3400053 + 478 114798425 - HNE_3230 - HemY domain-containing protein 3171 65.82 +1 3400244..3400954 + 236 114797653 - HNE_3232 - short chain dehydrogenase/reductase family oxidoreductase 3172 63.61 0 3400965..3401783 - 272 114797308 - HNE_3233 - PhzF family phenazine biosynthesis protein 3173 67.77 +1 3401871..3402689 - 272 114799777 thiD HNE_3234 - phosphomethylpyrimidine kinase 3174 60.06 0 3402695..3403345 - 216 114799016 - HNE_3235 - putative transaldolase 3175 59.57 0 3403379..3404689 - 436 114798680 - HNE_3236 - UDP-glucose dehydrogenase 3176 63.00 0 3404841..3405467 + 208 114799400 - HNE_3237 - glutathione S-transferase 3177 61.13 0 3405496..3407013 - 505 114798536 - HNE_3238 - putative phosphoglucomutase/phosphomannomutase 3178 64.12 0 3407233..3408018 + 261 114798145 - HNE_3239 - surface antigen family protein 3179 65.16 0 3408015..3408746 - 243 114799238 - HNE_3240 - class I glutamine amidotransferase domain-containing protein 3180 62.49 0 3408743..3410611 - 622 114799785 - HNE_3241 - putative multidrug ABC transporter, permease/ATP-binding protein 3181 66.00 +1 3410675..3412318 - 547 114797251 - HNE_3242 - hypothetical protein 3182 64.91 0 3412514..3412912 + 132 114798487 sdhC HNE_3243 - succinate dehydrogenase, cytochrome b556 subunit 3183 63.85 0 3412923..3413312 + 129 114799518 sdhD HNE_3244 - succinate dehydrogenase, hydrophobic membrane anchor protein 3184 63.81 0 3413339..3415126 + 595 114798098 sdhA HNE_3245 - succinate dehydrogenase flavoprotein subunit 3185 57.33 -1 3415160..3415459 + 99 114799101 - HNE_3246 - hypothetical protein 3186 61.05 0 3415494..3416276 + 260 114799946 sdhB HNE_3247 - succinate dehydrogenase iron-sulfur subunit 3187 67.63 +1 3416546..3417484 + 312 114797183 - HNE_3248 - ISHne3, transposase 3188 65.66 0 3417711..3418109 + 132 114799532 - HNE_3249 - hypothetical protein 3189 49.33 -2 3418314..3418613 + 99 114800529 - HNE_3250 - hypothetical protein 3190 56.80 -1 3418733..3419026 + 97 114797497 - HNE_3251 - hypothetical protein 3191 61.85 0 3419055..3419303 - 82 114798634 - HNE_3252 - hypothetical protein 3192 64.53 0 3419300..3420187 - 295 114799083 - HNE_3253 - putative FolD bifunctional protein 3193 67.67 +1 3420168..3420467 - 99 114798070 - HNE_3254 - hypothetical protein 3194 59.87 0 3420489..3420797 - 102 114797565 - HNE_3255 - hypothetical protein 3195 66.08 +1 3420990..3422183 + 397 114800188 - HNE_3256 - major facilitator family transporter 3196 66.16 +1 3422336..3423523 + 395 114800147 - HNE_3257 - major facilitator family transporter 3197 67.35 +1 3423520..3424251 - 243 114799477 - HNE_3258 - putative lipoprotein 3198 62.14 0 3424306..3425079 - 257 114798449 - HNE_3259 - short chain dehydrogenase 3199 66.21 +1 3425220..3425870 + 216 114797701 - HNE_3260 - hypothetical protein 3200 62.81 0 3425939..3426301 + 120 114797190 - HNE_3261 - hypothetical protein 3201 62.61 0 3426395..3427798 + 467 114797713 lpdA2 HNE_3262 - dihydrolipoamide dehydrogenase 3202 65.76 0 3427821..3428372 + 183 114798792 - HNE_3263 - acetyltransferase 3203 62.63 0 3428377..3429714 + 445 114799334 - HNE_3264 - hypothetical protein 3204 57.14 -1 3429721..3429951 - 76 114800220 - HNE_3265 - hypothetical protein 3205 66.67 +1 3430013..3430216 - 67 114797838 - HNE_3266 - hypothetical protein 3206 66.67 +1 3430329..3430784 - 151 114798633 dut HNE_3267 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3207 64.96 0 3430830..3432056 - 408 114799868 coaBC HNE_3268 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3208 67.57 +1 3432173..3432505 - 110 114800496 - HNE_3269 - hypothetical protein 3209 60.18 0 3432635..3433081 - 148 114799461 - HNE_3270 - hypothetical protein 3210 65.49 0 3433142..3434665 - 507 114798427 ubiB HNE_3271 - 2-polyprenylphenol 6-hydroxylase 3211 53.25 -2 3434685..3434915 + 76 114800138 - HNE_3272 - hypothetical protein 3212 62.61 0 3434927..3435715 - 262 114800122 ubiE HNE_3273 - ubiquinone/menaquinone biosynthesis methyltransferase UbiE 3213 62.98 0 3435714..3436607 + 297 114799193 mutM HNE_3274 - formamidopyrimidine-DNA glycosylase 3214 68.33 +1 3436604..3437806 - 400 114798759 - HNE_3275 - FAD-dependent oxidoreductase 3215 62.20 0 3437881..3438843 - 320 114797186 - HNE_3276 - hypothetical protein 3216 65.19 0 3438916..3440067 - 383 114800111 - HNE_3277 - putative hydrolase NrgC 3217 64.54 0 3440070..3441809 - 579 114797081 - HNE_3278 - amidohydrolase family protein 3218 63.82 0 3441884..3442234 - 116 114800031 - HNE_3279 - hypothetical protein 3219 65.04 0 3442231..3443337 - 368 114799851 - HNE_3280 - hypothetical protein 3220 65.99 +1 3443354..3444241 - 295 114798845 - HNE_3281 - acyltransferase domain-containing protein 3221 64.51 0 3444241..3445401 - 386 114797258 - HNE_3282 - acyl-CoA dehydrogenase 3222 59.48 0 3445416..3446333 - 305 114799570 metA HNE_3283 - homoserine O-succinyltransferase 3223 62.12 0 3446538..3447350 - 270 114800473 - HNE_3284 - enoyl-CoA hydratase/isomerase domain-containing protein 3224 61.14 0 3447492..3448142 + 216 114797158 - HNE_3285 - ExoD family protein 3225 66.09 +1 3448157..3448504 + 115 114798128 - HNE_3286 - hypothetical protein 3226 64.54 0 3448581..3449519 + 312 114797225 fabK HNE_3287 - trans-2-enoyl-ACP reductase II 3227 61.94 0 3449649..3451829 + 726 114797980 dcp HNE_3288 - peptidyl-dipeptidase 3228 66.67 +1 3451907..3452374 - 155 114799188 - HNE_3289 - sugar phosphotransferase system (PTS),mannose/fructose family protein 3229 58.79 0 3452401..3452997 - 198 114800119 - HNE_3290 - hypothetical protein 3230 61.99 0 3453225..3455342 - 705 114797169 - HNE_3291 - hypothetical protein 3231 65.67 0 3455430..3456536 - 368 114799167 pspF HNE_3292 - psp operon transcription activator 3232 63.54 0 3456687..3456878 + 63 114800010 - HNE_3293 - hypothetical protein 3233 63.14 0 3456904..3457584 + 226 114797618 pspA HNE_3294 - phage shock protein A 3234 65.12 0 3457698..3457955 + 85 114798410 pspB HNE_3295 - phage shock protein B 3235 60.19 0 3457967..3458383 + 138 114798290 pspC HNE_3296 - phage shock protein C 3236 58.06 -1 3458431..3458616 + 61 114797327 - HNE_3297 - hypothetical protein 3237 67.66 +1 3458613..3460433 - 606 114799736 - HNE_3298 - FAD dependent oxidoreductase domain-containing protein 3238 65.62 0 3460578..3460865 + 95 114799528 - HNE_3299 - hypothetical protein 3239 62.65 0 3460891..3461139 + 82 114798729 - HNE_3300 - hypothetical protein 3240 64.16 0 3461136..3461414 + 92 114797501 - HNE_3301 - hypothetical protein 3241 62.00 0 3461419..3461868 + 149 114800294 - HNE_3302 - hypothetical protein 3242 65.12 0 3461923..3462246 + 107 114799919 - HNE_3303 - ArsR family transcriptional regulator 3243 61.64 0 3462243..3462461 + 72 114799160 - HNE_3304 - hypothetical protein 3244 57.98 -1 3462468..3462893 + 141 114798014 - HNE_3305 - hypothetical protein 3245 56.47 -1 3462890..3463291 + 133 114797620 - HNE_3306 - hypothetical protein 3246 63.66 0 3463288..3463686 + 132 114798569 - HNE_3307 - hypothetical protein 3247 67.33 +1 3463731..3464630 + 299 114798167 - HNE_3308 - putative tyrosine recombinase XerC 3248 64.62 0 3464637..3465809 - 390 114797411 - HNE_3309 - putative oxygen-independent coproporphyrinogen III oxidase 3249 61.04 0 3465806..3466462 - 218 114800076 rdgB HNE_3310 - non-canonical purine NTP pyrophosphatase 3250 64.65 0 3466585..3467079 + 164 114799603 - HNE_3311 - hypothetical protein 3251 63.75 0 3467095..3467334 + 79 114799014 - HNE_3312 - DNA-binding protein 3252 56.98 -1 3467388..3468068 + 226 114797623 - HNE_3313 - putative satD protein 3253 56.15 -1 3468055..3468444 + 129 114800112 - HNE_3314 - hypothetical protein 3254 65.29 0 3468445..3469170 - 241 114798422 rph HNE_3315 - ribonuclease PH 3255 64.33 0 3469261..3470931 + 556 114799647 fhs HNE_3316 - formate--tetrahydrofolate ligase 3256 66.76 +1 3470977..3472065 + 362 114800305 hrcA HNE_3317 - heat-inducible transcription repressor 3257 66.14 +1 3472065..3472631 + 188 114797336 grpE HNE_3318 - co-chaperone GrpE 3258 67.54 +1 3472650..3473570 - 306 114797965 - HNE_3319 - hypothetical protein 3259 67.06 +1 3473667..3473918 - 83 114799170 - HNE_3320 - hypothetical protein 3260 61.81 0 3474210..3476105 + 631 114798319 dnaK HNE_3321 - chaperone protein DnaK 3261 65.05 0 3476261..3476878 + 205 114798065 - HNE_3322 - hypothetical protein 3262 62.53 0 3476925..3477914 - 329 114798574 - HNE_3323 - putative quinone oxidoreductase 3263 67.24 +1 3478012..3478884 + 290 114800051 - HNE_3324 - putative asparaginase 3264 62.93 0 3478881..3479201 + 106 114797073 - HNE_3325 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0