version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3128 64.84 0 3361091..3361912 + 273 114797941 suhB HNE_3187 - inositol-1-monophosphatase 3129 60.67 0 3362042..3363541 + 499 114800504 - HNE_3188 - hypothetical protein 3130 68.03 +1 3363833..3364417 + 194 114799920 - HNE_3189 - hypothetical protein 3131 64.88 0 3364547..3365722 + 391 114798588 - HNE_3190 - ISHne2, transposase 3132 58.20 -1 3365876..3366064 + 62 114797847 - HNE_3191 - hypothetical protein 3133 66.50 +1 3366046..3367878 - 610 114798592 - HNE_3192 - efflux ABC transporter, permease/ATP-binding protein 3134 59.36 0 3368052..3368270 + 72 114800232 rpmE HNE_3193 - ribosomal protein L31 3135 61.83 0 3368344..3369150 - 268 114799372 - HNE_3194 - glycosyl transferase, group 2 family protein 3136 63.47 0 3369147..3370430 - 427 114797140 - HNE_3195 - putative O-antigen polymerase 3137 62.11 0 3370437..3372410 - 657 114799933 thrS HNE_3196 - threonyl-tRNA synthetase 3138 67.91 +1 3372681..3373001 - 106 114798636 - HNE_3197 - hypothetical protein 3139 64.41 0 3373001..3373444 - 147 114799469 - HNE_3198 - hypothetical protein 3140 61.67 0 3373637..3374257 - 206 114800206 - HNE_3199 - ExoD family protein 3141 61.65 0 3374254..3374811 - 185 114797483 - HNE_3200 - phosphoglycerate mutase family protein 3142 62.05 0 3374796..3376181 - 461 114797963 cysS HNE_3201 - cysteinyl-tRNA synthetase 3143 58.87 0 3376206..3376436 + 76 114799006 - HNE_3202 - hypothetical protein 3144 58.62 0 3376545..3377165 + 206 114797723 folE HNE_3203 - GTP cyclohydrolase I 3145 64.17 0 3377229..3377948 - 239 114798758 - HNE_3204 - hypothetical protein 3146 58.83 0 3377959..3378864 - 301 114797757 - HNE_3205 - putative branched-chain amino acid aminotransferase 3147 59.19 0 3378888..3379649 - 253 114798796 - HNE_3206 - hypothetical protein 3148 62.40 0 3379671..3380186 - 171 114800548 - HNE_3207 - NUDIX family hydrolase 3149 62.25 0 3380183..3381472 - 429 114799786 - HNE_3208 - hypothetical protein 3150 61.63 0 3381599..3382948 - 449 114798612 - HNE_3209 - carboxyl-terminal protease 3151 61.25 0 3382981..3384216 - 411 114797629 - HNE_3210 - M23 family peptidase 3152 65.20 0 3384234..3384848 - 204 114799936 - HNE_3211 - hypothetical protein 3153 64.74 0 3384975..3385286 + 103 114799190 - HNE_3212 - hypothetical protein 3154 60.94 0 3385406..3385702 + 98 114797972 - HNE_3213 - hypothetical protein 3155 60.79 0 3385812..3386441 - 209 114797231 - HNE_3214 - hypothetical protein 3156 64.81 0 3386512..3387051 - 179 114799548 - HNE_3215 - acetyltransferase 3157 59.43 0 3387065..3387520 - 151 114798394 - HNE_3216 - putative lipoprotein 3158 63.70 0 3387610..3387912 - 100 114798959 - HNE_3217 - antibiotic biosynthesis monooxygenase domain-containing protein 3159 62.20 0 3387921..3388883 - 320 114799989 mdh HNE_3218 - malate dehydrogenase 3160 60.85 0 3389030..3389803 - 257 114797078 - HNE_3219 - hypothetical protein 3161 57.06 -1 3390182..3390514 + 110 114798253 - HNE_3220 - hypothetical protein 3162 64.88 0 3390587..3391147 + 186 114799686 - HNE_3221 - 2'-5' RNA ligase 3163 61.77 0 3391323..3391955 + 210 114800438 - HNE_3223 - ExoD family protein 3164 65.13 0 3392005..3392523 + 172 114797603 - HNE_3224 - hypothetical protein 3165 62.29 0 3392543..3393706 - 387 114798370 - HNE_3225 - acyl-CoA dehydrogenase family protein 3166 59.67 0 3393819..3395690 - 623 114800038 - HNE_3226 - putative lipoprotein 3167 66.15 +1 3395793..3396758 + 321 114797250 hemC HNE_3227 - porphobilinogen deaminase 3168 69.47 +2 3396755..3397468 + 237 114800364 hemD HNE_3228 - uroporphyrinogen-III synthase 3169 67.04 +1 3397538..3398611 + 357 114799645 - HNE_3229 - hypothetical protein 3170 67.29 +1 3398617..3400053 + 478 114798425 - HNE_3230 - HemY domain-containing protein 3171 65.82 +1 3400244..3400954 + 236 114797653 - HNE_3232 - short chain dehydrogenase/reductase family oxidoreductase 3172 63.61 0 3400965..3401783 - 272 114797308 - HNE_3233 - PhzF family phenazine biosynthesis protein 3173 67.77 +1 3401871..3402689 - 272 114799777 thiD HNE_3234 - phosphomethylpyrimidine kinase 3174 60.06 0 3402695..3403345 - 216 114799016 - HNE_3235 - putative transaldolase 3175 59.57 0 3403379..3404689 - 436 114798680 - HNE_3236 - UDP-glucose dehydrogenase 3176 63.00 0 3404841..3405467 + 208 114799400 - HNE_3237 - glutathione S-transferase 3177 61.13 0 3405496..3407013 - 505 114798536 - HNE_3238 - putative phosphoglucomutase/phosphomannomutase 3178 64.12 0 3407233..3408018 + 261 114798145 - HNE_3239 - surface antigen family protein 3179 65.16 0 3408015..3408746 - 243 114799238 - HNE_3240 - class I glutamine amidotransferase domain-containing protein 3180 62.49 0 3408743..3410611 - 622 114799785 - HNE_3241 - putative multidrug ABC transporter, permease/ATP-binding protein 3181 66.00 +1 3410675..3412318 - 547 114797251 - HNE_3242 - hypothetical protein 3182 64.91 0 3412514..3412912 + 132 114798487 sdhC HNE_3243 - succinate dehydrogenase, cytochrome b556 subunit 3183 63.85 0 3412923..3413312 + 129 114799518 sdhD HNE_3244 - succinate dehydrogenase, hydrophobic membrane anchor protein 3184 63.81 0 3413339..3415126 + 595 114798098 sdhA HNE_3245 - succinate dehydrogenase flavoprotein subunit 3185 57.33 -1 3415160..3415459 + 99 114799101 - HNE_3246 - hypothetical protein 3186 61.05 0 3415494..3416276 + 260 114799946 sdhB HNE_3247 - succinate dehydrogenase iron-sulfur subunit 3187 67.63 +1 3416546..3417484 + 312 114797183 - HNE_3248 - ISHne3, transposase 3188 65.66 0 3417711..3418109 + 132 114799532 - HNE_3249 - hypothetical protein 3189 49.33 -2 3418314..3418613 + 99 114800529 - HNE_3250 - hypothetical protein 3190 56.80 -1 3418733..3419026 + 97 114797497 - HNE_3251 - hypothetical protein 3191 61.85 0 3419055..3419303 - 82 114798634 - HNE_3252 - hypothetical protein 3192 64.53 0 3419300..3420187 - 295 114799083 - HNE_3253 - putative FolD bifunctional protein 3193 67.67 +1 3420168..3420467 - 99 114798070 - HNE_3254 - hypothetical protein 3194 59.87 0 3420489..3420797 - 102 114797565 - HNE_3255 - hypothetical protein 3195 66.08 +1 3420990..3422183 + 397 114800188 - HNE_3256 - major facilitator family transporter 3196 66.16 +1 3422336..3423523 + 395 114800147 - HNE_3257 - major facilitator family transporter 3197 67.35 +1 3423520..3424251 - 243 114799477 - HNE_3258 - putative lipoprotein 3198 62.14 0 3424306..3425079 - 257 114798449 - HNE_3259 - short chain dehydrogenase 3199 66.21 +1 3425220..3425870 + 216 114797701 - HNE_3260 - hypothetical protein 3200 62.81 0 3425939..3426301 + 120 114797190 - HNE_3261 - hypothetical protein 3201 62.61 0 3426395..3427798 + 467 114797713 lpdA2 HNE_3262 - dihydrolipoamide dehydrogenase 3202 65.76 0 3427821..3428372 + 183 114798792 - HNE_3263 - acetyltransferase 3203 62.63 0 3428377..3429714 + 445 114799334 - HNE_3264 - hypothetical protein 3204 57.14 -1 3429721..3429951 - 76 114800220 - HNE_3265 - hypothetical protein 3205 66.67 +1 3430013..3430216 - 67 114797838 - HNE_3266 - hypothetical protein 3206 66.67 +1 3430329..3430784 - 151 114798633 dut HNE_3267 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3207 64.96 0 3430830..3432056 - 408 114799868 coaBC HNE_3268 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3208 67.57 +1 3432173..3432505 - 110 114800496 - HNE_3269 - hypothetical protein 3209 60.18 0 3432635..3433081 - 148 114799461 - HNE_3270 - hypothetical protein 3210 65.49 0 3433142..3434665 - 507 114798427 ubiB HNE_3271 - 2-polyprenylphenol 6-hydroxylase 3211 53.25 -2 3434685..3434915 + 76 114800138 - HNE_3272 - hypothetical protein 3212 62.61 0 3434927..3435715 - 262 114800122 ubiE HNE_3273 - ubiquinone/menaquinone biosynthesis methyltransferase UbiE 3213 62.98 0 3435714..3436607 + 297 114799193 mutM HNE_3274 - formamidopyrimidine-DNA glycosylase 3214 68.33 +1 3436604..3437806 - 400 114798759 - HNE_3275 - FAD-dependent oxidoreductase 3215 62.20 0 3437881..3438843 - 320 114797186 - HNE_3276 - hypothetical protein 3216 65.19 0 3438916..3440067 - 383 114800111 - HNE_3277 - putative hydrolase NrgC 3217 64.54 0 3440070..3441809 - 579 114797081 - HNE_3278 - amidohydrolase family protein 3218 63.82 0 3441884..3442234 - 116 114800031 - HNE_3279 - hypothetical protein 3219 65.04 0 3442231..3443337 - 368 114799851 - HNE_3280 - hypothetical protein 3220 65.99 +1 3443354..3444241 - 295 114798845 - HNE_3281 - acyltransferase domain-containing protein 3221 64.51 0 3444241..3445401 - 386 114797258 - HNE_3282 - acyl-CoA dehydrogenase 3222 59.48 0 3445416..3446333 - 305 114799570 metA HNE_3283 - homoserine O-succinyltransferase 3223 62.12 0 3446538..3447350 - 270 114800473 - HNE_3284 - enoyl-CoA hydratase/isomerase domain-containing protein 3224 61.14 0 3447492..3448142 + 216 114797158 - HNE_3285 - ExoD family protein 3225 66.09 +1 3448157..3448504 + 115 114798128 - HNE_3286 - hypothetical protein 3226 64.54 0 3448581..3449519 + 312 114797225 fabK HNE_3287 - trans-2-enoyl-ACP reductase II 3227 61.94 0 3449649..3451829 + 726 114797980 dcp HNE_3288 - peptidyl-dipeptidase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0