version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 266 59.41 0 256887..257258 + 123 114798179 flgB HNE_0269 - flagellar basal body rod protein FlgB 267 60.47 0 257273..257659 + 128 114797235 - HNE_0270 - flagellar basal-body rod protein 268 60.33 0 257672..257971 + 99 114799787 fliE HNE_0271 - flagellar hook-basal body complex protein FliE 269 51.52 -2 257990..258253 + 87 114797953 fliQ HNE_0272 - flagellar biosynthetic protein fliQ 270 61.18 0 258263..260341 + 692 114797604 flhA HNE_0273 - flagellar biosynthesis protein FlhA 271 61.76 0 260383..261096 + 237 114799957 - HNE_0274 - flagellar biosynthetic protein FliR 272 57.91 -1 261106..262179 + 357 114799674 - HNE_0275 - FlhB/HrpN/YscU/SpaS family protein 273 64.88 0 262176..262511 + 111 114798442 - HNE_0276 - hypothetical protein 274 70.00 +2 262559..263398 - 279 114797988 - HNE_0277 - hypothetical protein 275 64.79 0 263458..264630 + 390 114797237 - HNE_0278 - acyl-CoA dehydrogenase family protein 276 61.32 0 264638..266413 - 591 114797349 - HNE_0279 - putative diguanylate cyclase 277 59.75 0 266410..266973 - 187 114799435 - HNE_0280 - GAF domain-containing protein 278 62.31 0 267448..268089 - 213 114799169 - HNE_0281 - ECF subfamily RNA polymerase sigma factor 279 59.59 0 270096..270533 - 145 114799499 - HNE_0283 - hypothetical protein 280 53.69 -2 271099..273480 - 793 114798348 - HNE_0284 - hypothetical protein 281 51.96 -2 273437..275680 - 747 114797220 - HNE_0285 - hypothetical protein 282 57.75 -1 277020..278174 - 384 114799924 - HNE_0286 - DNA-binding protein 283 57.26 -1 278171..279541 - 456 114799235 - HNE_0287 - hypothetical protein 284 58.29 -1 279534..280094 - 186 114798126 - HNE_0288 - hypothetical protein 285 58.09 -1 280516..281541 + 341 114797203 - HNE_0289 - hypothetical protein 286 53.12 -2 281535..282287 + 250 114799916 - HNE_0290 - hypothetical protein 287 52.54 -2 282297..282572 + 91 114798239 - HNE_0291 - hypothetical protein 288 62.81 0 282583..283644 - 353 114799242 - HNE_0292 - phage integrase family site specific recombinase 289 61.80 0 283755..284741 + 328 114799763 dusA HNE_0293 - tRNA-dihydrouridine synthase A 290 65.73 0 284928..286418 + 496 114799463 - HNE_0294 - sensor histidine kinase/response regulator 291 64.02 0 286415..288151 + 578 114800449 - HNE_0295 - putative muropeptide permease AmpG 292 61.86 0 288170..290437 - 755 114797897 maeB HNE_0296 - malic enzyme 293 65.77 0 290586..293258 + 890 114798005 mutS HNE_0297 - DNA mismatch repair protein MutS 294 58.37 -1 293255..293941 - 228 114799878 - HNE_0298 - glyoxalase family protein 295 63.08 0 294162..295220 + 352 114797344 - HNE_0299 - alpha/beta fold family hydrolase 296 65.93 +1 295227..295631 - 134 114798356 - HNE_0300 - putative lipoprotein 297 63.62 0 295659..296609 - 316 114797474 gshB HNE_0301 - glutathione synthetase 298 60.42 0 296677..297396 - 239 114798138 - HNE_0302 - phospholipid-binding protein 299 59.67 0 297745..297987 + 80 114798826 - HNE_0303 - iojap-like protein 300 67.10 +1 297992..298456 + 154 114797356 - HNE_0304 - hypothetical protein 301 63.77 0 298538..299851 + 437 114798052 - HNE_0305 - TRAP transporter solute receptor TAXI family protein 302 62.79 0 299869..300744 - 291 114798849 - HNE_0306 - LytTr DNA-binding domain-containing protein 303 61.36 0 300955..301350 + 131 114797842 - HNE_0307 - hypothetical protein 304 63.16 0 301420..302646 + 408 114797837 - HNE_0308 - alkaline phosphatase-like protein 305 66.51 +1 302686..303930 + 414 114798591 - HNE_0309 - major facilitator family transporter 306 59.63 0 304074..305267 + 397 114799396 sucC HNE_0310 - succinyl-CoA synthetase, beta subunit 307 60.69 0 305272..306174 + 300 114798328 sucD HNE_0311 - succinyl-CoA synthetase subunit alpha 308 62.51 0 306324..309332 + 1002 114800323 kgd HNE_0312 - alpha-ketoglutarate decarboxylase 309 62.86 0 309362..310912 + 516 114799329 sucB HNE_0313 - 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 310 61.62 0 310909..311622 - 237 114799483 - HNE_0314 - hypothetical protein 311 62.54 0 311781..312653 + 290 114798543 - HNE_0315 - glutathione S-transferase 312 65.64 0 312657..313634 + 325 114797156 - HNE_0316 - hypothetical protein 313 63.48 0 313726..314070 + 114 114797698 - HNE_0317 - putative chorismate mutase, type II 314 68.48 +1 314031..314417 - 128 114800541 - HNE_0318 - hypothetical protein 315 59.03 0 314588..314731 + 47 114800204 - HNE_0319 - hypothetical protein 316 69.37 +1 314814..316808 + 664 114798902 - HNE_0320 - hypothetical protein 317 65.92 +1 316818..317750 - 310 114798673 - HNE_0321 - LysR family transcriptional regulator 318 68.39 +1 317859..319310 + 483 114800230 cysG HNE_0322 - siroheme synthase 319 64.81 0 319307..319630 + 107 114797102 - HNE_0323 - hypothetical protein 320 63.14 0 319630..320253 + 207 114798341 - HNE_0324 - glutathione S-transferase 321 62.87 0 320253..321911 + 552 114798651 - HNE_0325 - putative sulfite reductase 322 61.28 0 321898..322380 + 160 114799901 - HNE_0326 - hypothetical protein 323 63.54 0 322398..323132 + 244 114798004 cysH HNE_0327 - phosphoadenosine phosphosulfate reductase 324 67.41 +1 323239..324048 - 269 114799577 - HNE_0328 - RNA methyltransferase 325 62.76 0 324079..324411 - 110 114800064 - HNE_0329 - hypothetical protein 326 60.65 0 324491..325387 - 298 114797392 rpoH HNE_0330 - RNA polymerase factor sigma-32 327 64.39 0 325779..326921 - 380 114798141 - HNE_0331 - AFG1 family ATPase 328 59.51 0 326937..327551 - 204 114799025 - HNE_0332 - S54 family peptidase 329 62.89 0 327659..328108 - 149 114799030 - HNE_0333 - response regulator receiver domain-containing protein 330 51.85 -2 328188..328322 + 44 114798280 - HNE_0334 - hypothetical protein 331 63.25 0 328339..329244 + 301 114800146 - HNE_0335 - acyltransferase domain-containing protein 332 65.04 0 329316..329807 + 163 114799412 - HNE_0336 - acetyltransferase 333 64.37 0 329928..331277 + 449 114798518 - HNE_0337 - peptide-acetyl-coenzyme A transporter (PAT) family protein 334 66.96 +1 331302..333341 - 679 114797790 - HNE_0338 - hypothetical protein 335 69.69 +2 333338..336214 - 958 114800527 - HNE_0339 - hypothetical protein 336 68.97 +1 336211..337077 - 288 114797646 - HNE_0340 - hypothetical protein 337 66.41 +1 337074..337463 - 129 114798095 - HNE_0341 - putative lipoprotein 338 66.57 +1 337460..338458 - 332 114799543 - HNE_0342 - AAA family ATPase 339 60.03 0 338534..339121 + 195 114798915 - HNE_0343 - hypothetical protein 340 63.62 0 339131..339754 + 207 114799866 - HNE_0344 - NUDIX family hydrolase 341 64.96 0 339839..340189 + 116 114798320 - HNE_0345 - hypothetical protein 342 69.55 +2 340236..341381 + 381 114799278 - HNE_0346 - tRNA nucleotidyltransferase/poly(A) polymerase family protein 343 57.78 -1 341509..341733 + 74 114800278 - HNE_0347 - putative addiction module antidote 344 64.60 0 341730..342116 + 128 114797849 - HNE_0348 - putative addiction module toxin 345 63.53 0 342121..343014 - 297 114798887 hemF HNE_0349 - coproporphyrinogen III oxidase 346 64.36 0 343216..343779 + 187 114798737 petA HNE_0350 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 347 60.64 0 343795..345255 + 486 114797745 - HNE_0351 - putative ubiquinol-cytochrome c reductase, cytochrome b 348 64.27 0 345281..346240 + 319 114797363 - HNE_0352 - putative ubiquinol-cytochrome c reductase, cytochrome c1 349 67.24 +1 346256..346774 + 172 114799462 - HNE_0353 - acetyltransferase 350 66.33 +1 346771..347649 + 292 114798898 mtaP HNE_0354 - methylthioadenosine phosphorylase 351 64.76 0 347721..348719 + 332 114797053 - HNE_0355 - hypothetical protein 352 65.63 0 348691..349173 + 160 114799850 - HNE_0356 - putative lipoprotein 353 64.85 0 349255..349803 - 182 114799643 - HNE_0357 - fasciclin domain-containing protein 354 62.41 0 349930..350493 - 187 114799966 - HNE_0358 - fasciclin domain-containing protein 355 62.36 0 350712..351245 - 177 114800417 - HNE_0359 - fasciclin domain-containing protein 356 66.24 +1 351455..352165 + 236 114797950 - HNE_0360 - DnaJ family molecular chaperone 357 73.33 +2 352256..352540 + 94 114798970 - HNE_0361 - hypothetical protein 358 59.74 0 352622..353560 - 312 114799706 prs HNE_0362 - ribose-phosphate pyrophosphokinase 359 66.27 +1 353684..354448 - 254 114797428 - HNE_0363 - hypothetical protein 360 62.08 0 354630..356462 + 610 114798286 typA HNE_0364 - GTP-binding protein TypA 361 63.73 0 356489..356863 - 124 114799547 - HNE_0365 - putative lipoprotein 362 58.06 -1 357030..357215 + 61 114799103 - HNE_0366 - hypothetical protein 363 67.92 +1 357286..358482 - 398 114799607 - HNE_0367 - hypothetical protein 364 62.90 0 358788..359132 - 114 114799937 - HNE_0368 - hypothetical protein 365 68.29 +1 359705..360382 + 225 114799208 - HNE_0369 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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