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Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2938 63.14 0 3154082..3156466 + 794 114799863 - HNE_2995 - pyruvate dehydrogenase E1 component-like protein 2939 58.64 0 3156519..3158411 + 630 114797530 - HNE_2996 - diguanylate cyclase 2940 61.21 0 3158427..3159269 - 280 114799306 - HNE_2997 - carbon-nitrogen family hydrolase 2941 65.35 0 3159286..3160269 - 327 114798798 - HNE_2998 - peptidyl-arginine deiminase family protein 2942 58.63 0 3160362..3163508 - 1048 114797805 - HNE_2999 - outer membrane receptor (OMR) family protein 2943 63.05 0 3163770..3165347 + 525 114797402 - HNE_3000 - hypothetical protein 2944 60.34 0 3165359..3166006 - 215 114798944 msrA1 HNE_3001 - methionine-S-sulfoxide reductase 2945 67.10 +1 3166169..3168223 - 684 114797739 pbpC HNE_3002 - penicillin-binding protein 1C 2946 64.65 0 3168265..3173262 - 1665 114800482 - HNE_3003 - alpha-2-macroglobulin family protein 2947 65.28 0 3173349..3174212 - 287 114799475 - HNE_3004 - hypothetical protein 2948 65.04 0 3174276..3174950 + 224 114799457 - HNE_3005 - TPR domain-containing protein 2949 55.16 -1 3174969..3175394 - 141 114799126 - HNE_3006 - putative lipoprotein 2950 66.67 +1 3175555..3176925 - 456 114800113 - HNE_3007 - cytosol aminopeptidase 2951 66.67 +1 3177046..3177912 + 288 114797147 - HNE_3008 - TPR domain-containing protein 2952 61.08 0 3177982..3179001 - 339 114798130 - HNE_3009 - type II secretion system protein 2953 60.10 0 3179016..3180035 - 339 114798049 - HNE_3010 - secretion system protein 2954 60.55 0 3180047..3181534 - 495 114800387 cpaF HNE_3011 - pilus assembly protein CpaF 2955 59.20 0 3181560..3182966 - 468 114797644 - HNE_3012 - pilus assembly protein CpaE 2956 61.18 0 3183001..3183711 - 236 114798148 - HNE_3013 - pilus assembly protein CpaD 2957 60.63 0 3183724..3185331 - 535 114799376 - HNE_3014 - pilus assembly protein CpaC 2958 61.94 0 3185334..3186179 - 281 114799072 - HNE_3015 - pilus assembly protein CpaB 2959 62.02 0 3186278..3186793 - 171 114800034 - HNE_3016 - pilus assembly protein CpaA 2960 56.32 -1 3186944..3187117 - 57 114797760 - HNE_3017 - flp/Fap pilus protein 2961 57.43 -1 3187425..3187868 + 147 114798749 - HNE_3018 - hypothetical protein 2962 56.97 -1 3187981..3188547 + 188 114797939 - HNE_3019 - TadE-like protein 2963 56.80 -1 3188544..3189161 + 205 114798948 - HNE_3020 - Flp/Fap pilin component 2964 63.04 0 3189158..3190645 - 495 114799959 - HNE_3021 - hypothetical protein 2965 61.68 0 3190739..3192163 - 474 114797447 murC HNE_3022 - UDP-N-acetylmuramate--L-alanine ligase 2966 60.78 0 3192179..3192535 - 118 114798779 - HNE_3023 - hypothetical protein 2967 64.31 0 3192532..3193632 - 366 114799346 murG HNE_3024 - N-acetylglucosaminyl transferase 2968 61.98 0 3193625..3194776 - 383 114799677 - HNE_3025 - cell cycle protein FtsW 2969 62.99 0 3194773..3196188 - 471 114798168 murD HNE_3026 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2970 62.73 0 3196199..3197392 - 397 114797628 mraY HNE_3027 - phospho-N-acetylmuramoyl-pentapeptide-transferase 2971 63.12 0 3197392..3198828 - 478 114799693 murF HNE_3028 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 2972 64.65 0 3198825..3200261 - 478 114798974 murE HNE_3029 - UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diamino-pimelate ligase 2973 65.63 0 3200258..3201901 - 547 114798338 - HNE_3030 - putative penicillin-binding protein 2 2974 62.09 0 3201898..3202290 - 130 114797112 - HNE_3031 - putative cell division protein FtsL 2975 65.31 0 3202287..3203315 - 342 114799717 mraW HNE_3032 - S-adenosyl-methyltransferase MraW 2976 62.45 0 3203315..3203812 - 165 114800447 - HNE_3033 - putative MraZ protein 2977 63.72 0 3204224..3204766 - 180 114799646 - HNE_3034 - alkylhydroperoxidase 2978 59.32 0 3204895..3205452 - 185 114797286 ahpC HNE_3035 - alkylhydroperoxide reductase C 2979 67.85 +1 3205566..3206495 + 309 114800072 - HNE_3036 - putative oxidative stress regulatory protein OxyR 2980 65.58 0 3206624..3207817 + 397 114800086 - HNE_3037 - hypothetical protein 2981 63.01 0 3207909..3208892 + 327 114798495 - HNE_3038 - transcriptional regulator, MarR family/acetyltransferase, GNAT family protein 2982 64.02 0 3208917..3210392 - 491 114797505 - HNE_3039 - sigma-54 dependent DNA-binding response regulator 2983 67.20 +1 3210675..3212183 + 502 114799704 - HNE_3040 - phosphate transporter family protein 2984 68.52 +1 3212391..3212768 + 125 114798958 - HNE_3041 - hypothetical protein 2985 50.30 -2 3213821..3213985 - 54 114797702 - HNE_3042 - hypothetical protein 2986 54.01 -2 3214073..3214309 - 78 114800542 - HNE_3043 - hypothetical protein 2987 63.25 0 3214753..3215103 - 116 114799356 - HNE_3044 - hypothetical protein 2988 63.49 0 3215337..3217382 + 681 114800055 uvrB HNE_3045 - excinuclease ABC subunit B 2989 68.65 +1 3217688..3218443 - 251 114797872 - HNE_3047 - hypothetical protein 2990 66.01 +1 3218636..3218938 + 100 114798648 - HNE_3048 - hypothetical protein 2991 58.52 0 3219040..3219960 + 306 114799849 - HNE_3049 - hypothetical protein 2992 60.93 0 3220484..3222820 + 778 114797059 - HNE_3050 - TonB-dependent receptor 2993 60.03 0 3222945..3223652 - 235 114798285 - HNE_3051 - TetR family transcriptional regulator 2994 61.99 0 3223829..3224704 + 291 114799036 - HNE_3052 - alpha/beta fold family hydrolase 2995 62.86 0 3224701..3225987 + 428 114800311 - HNE_3053 - major facilitator family transporter 2996 61.93 0 3225965..3226513 + 182 114797891 - HNE_3054 - thioesterase family protein 2997 62.84 0 3226540..3227166 - 208 114798608 - HNE_3055 - putative lipoprotein 2998 57.49 -1 3227298..3228245 - 315 114798552 - HNE_3056 - ABC transporter, permease protein 2999 64.31 0 3228374..3228925 + 183 114799479 gcrA HNE_3057 - GcrA cell cycle regulator 3000 63.48 0 3229002..3230381 - 459 114800483 - HNE_3058 - sensor histidine kinase 3001 65.58 0 3230592..3232061 + 489 114797724 - HNE_3059 - RND efflux system outer membrane lipoprotein 3002 65.25 0 3232067..3233335 + 422 114797172 - HNE_3060 - RND family efflux transporter MFP subunit 3003 60.89 0 3233332..3236553 + 1073 114797926 - HNE_3061 - AcrB/AcrD/AcrF family protein 3004 59.20 0 3236639..3238861 + 740 114799171 - HNE_3062 - M13 family peptidase 3005 62.12 0 3238996..3239325 + 109 114800006 - HNE_3063 - hypothetical protein 3006 64.85 0 3239431..3240036 + 201 114797596 - HNE_3064 - glutathione peroxidase family protein 3007 64.47 0 3240139..3241320 + 393 114798386 - HNE_3065 - acetyl-CoA acetyltransferase/thiolase family protein 3008 65.22 0 3241329..3241952 + 207 114798997 - HNE_3066 - hypothetical protein 3009 62.60 0 3241971..3243053 + 360 114797449 - HNE_3067 - hypothetical protein 3010 64.92 0 3243090..3244175 - 361 114798211 - HNE_3068 - beta-lactamase 3011 52.21 -2 3244228..3244884 - 218 114799504 - HNE_3069 - AsnC family transcriptional regulator 3012 62.48 0 3244853..3248314 + 1153 114800274 - HNE_3070 - indolepyruvate ferredoxin oxidoreductase 3013 62.46 0 3248406..3248738 - 110 114797671 - HNE_3071 - hypothetical protein 3014 61.83 0 3248802..3250394 - 530 114798391 lysK HNE_3072 - lysyl-tRNA synthetase 3015 56.00 -1 3250554..3251003 + 149 114799146 - HNE_3073 - hypothetical protein 3016 59.65 0 3251007..3251234 + 75 114800333 - HNE_3074 - DNA-binding protein 3017 56.62 -1 3251298..3251516 + 72 114799695 - HNE_3075 - BFD/(2Fe-2S)-binding domain-containing protein 3018 53.50 -2 3251720..3252205 + 161 114797328 bfr HNE_3076 - bacterioferritin 3019 60.02 0 3252303..3253205 + 300 114800427 - HNE_3077 - hypothetical protein 3020 56.27 -1 3253377..3253751 + 124 114798832 - HNE_3078 - hypothetical protein 3021 60.42 0 3253828..3254964 - 378 114798498 - HNE_3079 - acyl-CoA dehydrogenase family protein 3022 60.91 0 3255025..3256239 - 404 114797732 - HNE_3080 - acyl-CoA dehydrogenase family protein 3023 61.26 0 3256392..3256835 - 147 114799896 - HNE_3081 - hypothetical protein 3024 61.20 0 3256990..3258600 + 536 114798846 - HNE_3082 - deoxyribodipyrimidine photolyase family protein 3025 60.46 0 3259246..3259551 + 101 114797586 - HNE_3083 - hypothetical protein 3026 58.71 0 3259667..3260194 - 175 114797448 - HNE_3084 - phosphoglycerate mutase family protein 3027 56.89 -1 3260814..3261560 + 248 114799495 - HNE_3085 - two-component response regulator 3028 55.19 -1 3261574..3262566 - 330 114800281 - HNE_3086 - putative sensory box sensor histidine kinase 3029 61.88 0 3262742..3263701 + 319 114797416 - HNE_3087 - K+-dependent Na+/Ca+ exchanger related-protein 3030 59.81 0 3263667..3264614 + 315 114799961 - HNE_3088 - hypothetical protein 3031 61.64 0 3264659..3266527 + 622 114799388 - HNE_3089 - ABC transporter, permease/ATP-binding protein 3032 52.14 -2 3266720..3268330 + 536 114798780 - HNE_3090 - putative lipoprotein 3033 61.02 0 3268335..3269219 - 294 114800499 ilvE HNE_3091 - branched-chain amino acid aminotransferase 3034 63.44 0 3269273..3269737 + 154 114799516 - HNE_3092 - MarR family transcriptional regulator 3035 64.06 0 3269748..3270437 + 229 114798914 ompR HNE_3093 - DNA-binding response regulator OmpR 3036 61.65 0 3270446..3271741 + 431 114798347 - HNE_3094 - sensor histidine kinase 3037 59.14 0 3271774..3273315 + 513 114798533 - HNE_3095 - carbon-nitrogen family hydrolase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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