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Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2892 70.92 +2 3106344..3106625 - 93 114799888 - HNE_2948 - hypothetical protein 2893 68.52 +1 3106693..3107016 - 107 114797295 - HNE_2949 - hypothetical protein 2894 62.31 0 3107044..3108444 - 466 114799865 fumC HNE_2950 - fumarate hydratase 2895 59.28 0 3109107..3109580 - 157 114797360 - HNE_2951 - hypothetical protein 2896 63.31 0 3109793..3110149 + 118 114798324 - HNE_2952 - RusA family protein 2897 62.75 0 3110156..3111382 - 408 114799316 - HNE_2953 - cytochrome P450 family protein 2898 60.49 0 3111473..3111925 - 150 114800340 - HNE_2954 - thioesterase family protein 2899 61.36 0 3111955..3112425 - 156 114797792 - HNE_2955 - hypothetical protein 2900 63.52 0 3112624..3113862 + 412 114798800 - HNE_2956 - pyridoxal-dependent decarboxylase domain-containing protein 2901 58.99 0 3113956..3114372 + 138 114799809 - HNE_2957 - hypothetical protein 2902 62.57 0 3114397..3115737 - 446 114797208 - HNE_2958 - type I phosphodiesterase/nucleotide pyrophosphatase family protein 2903 60.73 0 3115887..3117857 + 656 114797957 - HNE_2959 - S9A/B/C family peptidase 2904 59.82 0 3117985..3118656 + 223 114799209 - HNE_2960 - glutathione S-transferase 2905 65.97 +1 3118681..3119688 - 335 114799928 - HNE_2961 - short chain dehydrogenase/reductase family oxidoreductase 2906 63.98 0 3119799..3120281 - 160 114797630 - HNE_2962 - hypothetical protein 2907 59.69 0 3120271..3120915 - 214 114798412 - HNE_2963 - hypothetical protein 2908 60.62 0 3121490..3122101 + 203 114797624 - HNE_2965 - TetR family transcriptional regulator 2909 63.25 0 3122104..3123948 - 614 114798753 uvrC HNE_2966 - excinuclease ABC subunit C 2910 61.37 0 3124031..3124540 - 169 114797434 - HNE_2967 - hypothetical protein 2911 63.78 0 3124579..3125790 + 403 114797936 aatA HNE_2968 - aspartate aminotransferase 2912 61.72 0 3125912..3126376 + 154 114797861 dps HNE_2969 - DNA protection protein 2913 65.94 +1 3126373..3127338 - 321 114800239 - HNE_2970 - alpha/beta fold family hydrolase 2914 63.41 0 3127526..3128353 + 275 114798137 - HNE_2971 - hypothetical protein 2915 61.59 0 3128407..3130335 + 642 114797417 - HNE_2972 - hypothetical protein 2916 63.49 0 3130606..3131517 - 303 114799877 - HNE_2973 - LysR family transcriptional regulator 2917 63.35 0 3131673..3132455 + 260 114800460 - HNE_2974 - oxidoreductase, short chain dehydrogenase/reductase family protein 2918 64.00 0 3133304..3134278 - 324 114799638 - HNE_2975 - zinc-binding dehydrogenase family oxidoreductase 2919 64.46 0 3134275..3135315 - 346 114798413 - HNE_2976 - alpha/beta hydrolase fold family protein 2920 62.74 0 3135402..3136088 - 228 114797609 - HNE_2977 - TetR family transcriptional regulator 2921 66.67 +1 3136215..3136847 - 210 114798893 - HNE_2978 - hypothetical protein 2922 46.11 -2 3136988..3139171 + 727 114798367 - HNE_2979 - KAP P-loop domain-containing protein 2923 63.72 0 3139245..3139922 - 225 114797595 - HNE_2980 - hypothetical protein 2924 64.55 0 3139934..3140641 - 235 114797224 - HNE_2981 - hypothetical protein 2925 67.37 +1 3140684..3141394 - 236 114798883 - HNE_2982 - M23 family peptidase 2926 61.19 0 3141405..3142736 - 443 114798584 - HNE_2983 - monooxygenase flavin-binding family protein 2927 59.62 0 3142703..3143341 + 212 114797200 - HNE_2984 - thioesterase family protein 2928 63.87 0 3143338..3143766 + 142 114799716 - HNE_2985 - thioesterase family protein 2929 60.86 0 3143878..3144342 + 154 114800300 - HNE_2986 - putative lipoprotein 2930 62.27 0 3144352..3145239 - 295 114798761 - HNE_2987 - putative lipoprotein 2931 65.07 0 3145252..3148386 - 1044 114799148 - HNE_2988 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 2932 64.23 0 3148576..3149682 + 368 114797590 - HNE_2989 - glycosyl transferase, group 1 family protein 2933 62.84 0 3149685..3150782 - 365 114799207 - HNE_2990 - putative phosphate ABC transporter, periplasmic phosphate-binding protein 2934 62.82 0 3151052..3152248 + 398 114800350 - HNE_2991 - decarboxylase, group IV 2935 66.09 +1 3152191..3153063 - 290 114799484 murI HNE_2992 - glutamate racemase 2936 62.96 0 3153174..3153497 + 107 114798774 - HNE_2993 - hypothetical protein 2937 62.50 0 3153502..3153933 - 143 114798864 - HNE_2994 - hypothetical protein 2938 63.14 0 3154082..3156466 + 794 114799863 - HNE_2995 - pyruvate dehydrogenase E1 component-like protein 2939 58.64 0 3156519..3158411 + 630 114797530 - HNE_2996 - diguanylate cyclase 2940 61.21 0 3158427..3159269 - 280 114799306 - HNE_2997 - carbon-nitrogen family hydrolase 2941 65.35 0 3159286..3160269 - 327 114798798 - HNE_2998 - peptidyl-arginine deiminase family protein 2942 58.63 0 3160362..3163508 - 1048 114797805 - HNE_2999 - outer membrane receptor (OMR) family protein 2943 63.05 0 3163770..3165347 + 525 114797402 - HNE_3000 - hypothetical protein 2944 60.34 0 3165359..3166006 - 215 114798944 msrA1 HNE_3001 - methionine-S-sulfoxide reductase 2945 67.10 +1 3166169..3168223 - 684 114797739 pbpC HNE_3002 - penicillin-binding protein 1C 2946 64.65 0 3168265..3173262 - 1665 114800482 - HNE_3003 - alpha-2-macroglobulin family protein 2947 65.28 0 3173349..3174212 - 287 114799475 - HNE_3004 - hypothetical protein 2948 65.04 0 3174276..3174950 + 224 114799457 - HNE_3005 - TPR domain-containing protein 2949 55.16 -1 3174969..3175394 - 141 114799126 - HNE_3006 - putative lipoprotein 2950 66.67 +1 3175555..3176925 - 456 114800113 - HNE_3007 - cytosol aminopeptidase 2951 66.67 +1 3177046..3177912 + 288 114797147 - HNE_3008 - TPR domain-containing protein 2952 61.08 0 3177982..3179001 - 339 114798130 - HNE_3009 - type II secretion system protein 2953 60.10 0 3179016..3180035 - 339 114798049 - HNE_3010 - secretion system protein 2954 60.55 0 3180047..3181534 - 495 114800387 cpaF HNE_3011 - pilus assembly protein CpaF 2955 59.20 0 3181560..3182966 - 468 114797644 - HNE_3012 - pilus assembly protein CpaE 2956 61.18 0 3183001..3183711 - 236 114798148 - HNE_3013 - pilus assembly protein CpaD 2957 60.63 0 3183724..3185331 - 535 114799376 - HNE_3014 - pilus assembly protein CpaC 2958 61.94 0 3185334..3186179 - 281 114799072 - HNE_3015 - pilus assembly protein CpaB 2959 62.02 0 3186278..3186793 - 171 114800034 - HNE_3016 - pilus assembly protein CpaA 2960 56.32 -1 3186944..3187117 - 57 114797760 - HNE_3017 - flp/Fap pilus protein 2961 57.43 -1 3187425..3187868 + 147 114798749 - HNE_3018 - hypothetical protein 2962 56.97 -1 3187981..3188547 + 188 114797939 - HNE_3019 - TadE-like protein 2963 56.80 -1 3188544..3189161 + 205 114798948 - HNE_3020 - Flp/Fap pilin component 2964 63.04 0 3189158..3190645 - 495 114799959 - HNE_3021 - hypothetical protein 2965 61.68 0 3190739..3192163 - 474 114797447 murC HNE_3022 - UDP-N-acetylmuramate--L-alanine ligase 2966 60.78 0 3192179..3192535 - 118 114798779 - HNE_3023 - hypothetical protein 2967 64.31 0 3192532..3193632 - 366 114799346 murG HNE_3024 - N-acetylglucosaminyl transferase 2968 61.98 0 3193625..3194776 - 383 114799677 - HNE_3025 - cell cycle protein FtsW 2969 62.99 0 3194773..3196188 - 471 114798168 murD HNE_3026 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2970 62.73 0 3196199..3197392 - 397 114797628 mraY HNE_3027 - phospho-N-acetylmuramoyl-pentapeptide-transferase 2971 63.12 0 3197392..3198828 - 478 114799693 murF HNE_3028 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 2972 64.65 0 3198825..3200261 - 478 114798974 murE HNE_3029 - UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diamino-pimelate ligase 2973 65.63 0 3200258..3201901 - 547 114798338 - HNE_3030 - putative penicillin-binding protein 2 2974 62.09 0 3201898..3202290 - 130 114797112 - HNE_3031 - putative cell division protein FtsL 2975 65.31 0 3202287..3203315 - 342 114799717 mraW HNE_3032 - S-adenosyl-methyltransferase MraW 2976 62.45 0 3203315..3203812 - 165 114800447 - HNE_3033 - putative MraZ protein 2977 63.72 0 3204224..3204766 - 180 114799646 - HNE_3034 - alkylhydroperoxidase 2978 59.32 0 3204895..3205452 - 185 114797286 ahpC HNE_3035 - alkylhydroperoxide reductase C 2979 67.85 +1 3205566..3206495 + 309 114800072 - HNE_3036 - putative oxidative stress regulatory protein OxyR 2980 65.58 0 3206624..3207817 + 397 114800086 - HNE_3037 - hypothetical protein 2981 63.01 0 3207909..3208892 + 327 114798495 - HNE_3038 - transcriptional regulator, MarR family/acetyltransferase, GNAT family protein 2982 64.02 0 3208917..3210392 - 491 114797505 - HNE_3039 - sigma-54 dependent DNA-binding response regulator 2983 67.20 +1 3210675..3212183 + 502 114799704 - HNE_3040 - phosphate transporter family protein 2984 68.52 +1 3212391..3212768 + 125 114798958 - HNE_3041 - hypothetical protein 2985 50.30 -2 3213821..3213985 - 54 114797702 - HNE_3042 - hypothetical protein 2986 54.01 -2 3214073..3214309 - 78 114800542 - HNE_3043 - hypothetical protein 2987 63.25 0 3214753..3215103 - 116 114799356 - HNE_3044 - hypothetical protein 2988 63.49 0 3215337..3217382 + 681 114800055 uvrB HNE_3045 - excinuclease ABC subunit B 2989 68.65 +1 3217688..3218443 - 251 114797872 - HNE_3047 - hypothetical protein 2990 66.01 +1 3218636..3218938 + 100 114798648 - HNE_3048 - hypothetical protein 2991 58.52 0 3219040..3219960 + 306 114799849 - HNE_3049 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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