version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2785 61.25 0 2998526..2998894 - 122 114799563 rplN HNE_2841 - ribosomal protein L14 2786 54.07 -2 2998891..2999136 - 81 114798486 rpsQ HNE_2842 - ribosomal protein S17 2787 55.56 -1 2999148..2999345 - 65 114799564 rpmC HNE_2843 - ribosomal protein L29 2788 60.91 0 2999348..2999764 - 138 114798200 rplP HNE_2844 - 50S ribosomal protein L16 2789 61.38 0 2999768..3000505 - 245 114797822 rpsC HNE_2845 - ribosomal protein S3 2790 61.54 0 3000505..3000894 - 129 114799750 rplV HNE_2846 - 50S ribosomal protein L22 2791 56.27 -1 3000897..3001175 - 92 114799147 rpsS HNE_2847 - ribosomal protein S19 2792 61.49 0 3001194..3002024 - 276 114798100 rplB HNE_2848 - 50S ribosomal protein L2 2793 53.67 -2 3002043..3002342 - 99 114799096 rplW HNE_2849 - ribosomal protein L23 2794 60.47 0 3002342..3002986 - 214 114799746 rplD HNE_2850 - 50S ribosomal protein L4 2795 61.26 0 3002986..3003744 - 252 114797091 rplC HNE_2851 - ribosomal protein L3 2796 59.50 0 3003744..3004064 - 106 114798629 rpsJ HNE_2852 - ribosomal protein S10 2797 62.05 0 3004398..3005588 - 396 114799428 tuf2 HNE_2853 - elongation factor Tu 2798 60.08 0 3005625..3007748 - 707 114800238 fusA HNE_2854 - elongation factor G 2799 60.30 0 3007836..3008306 - 156 114799363 rpsG HNE_2855 - 30S ribosomal protein S7 2800 61.56 0 3008322..3008693 - 123 114800161 rpsL HNE_2856 - 30S ribosomal protein S12 2801 61.75 0 3009131..3013339 - 1402 114798314 rpoC HNE_2857 - DNA-directed RNA polymerase, beta' subunit 2802 61.11 0 3013454..3017590 - 1378 114799111 rpoB HNE_2858 - DNA-directed RNA polymerase subunit beta 2803 56.61 -1 3017745..3018122 - 125 114798365 rplL HNE_2859 - ribosomal protein L7/L12 2804 59.88 0 3018181..3018696 - 171 114799263 rplJ HNE_2860 - ribosomal protein L10 2805 56.75 -1 3019117..3019953 + 278 114800263 - HNE_2861 - hypothetical protein 2806 61.66 0 3019963..3020880 - 305 114797871 - HNE_2862 - hypothetical protein 2807 59.98 0 3020155..3021051 + 298 114797065 - HNE_2863 - hypothetical protein 2808 60.78 0 3021063..3021758 - 231 114798066 rplA HNE_2864 - 50S ribosomal protein L1 2809 59.51 0 3021764..3022210 - 148 114799038 rplK HNE_2865 - ribosomal protein L11 2810 63.72 0 3022411..3023190 - 259 114800106 - HNE_2866 - M48 family peptidase 2811 65.07 0 3023529..3023903 + 124 114799225 - HNE_2867 - hypothetical protein 2812 68.03 +1 3024129..3024716 + 195 114798598 - HNE_2868 - hypothetical protein 2813 66.24 +1 3024688..3026091 - 467 114800065 - HNE_2869 - hypothetical protein 2814 63.11 0 3026220..3027035 + 271 114799377 - HNE_2870 - RNA methyltransferase 2815 66.44 +1 3027032..3027928 + 298 114800149 - HNE_2871 - hypothetical protein 2816 65.69 0 3027965..3028474 - 169 114797875 - HNE_2872 - putative lipoprotein 2817 59.74 0 3028704..3031820 - 1038 114798601 - HNE_2873 - TonB-dependent receptor 2818 62.30 0 3032384..3034009 - 541 114799455 oppA HNE_2874 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 2819 64.07 0 3034121..3034621 + 166 114800192 - HNE_2875 - hypothetical protein 2820 62.33 0 3034637..3035536 - 299 114798441 - HNE_2876 - metallo-beta-lactamase family protein 2821 59.42 0 3035570..3036508 - 312 114799472 - HNE_2877 - hypothetical protein 2822 65.45 0 3036624..3037034 - 136 114799348 - HNE_2878 - hypothetical protein 2823 63.89 0 3037168..3038139 + 323 114797841 oppB HNE_2879 - oligopeptide ABC transporter, permease protein 2824 65.46 0 3038139..3039050 + 303 114797484 oppC HNE_2880 - oligopeptide ABC transporter, permease protein 2825 67.84 +1 3039149..3039913 + 254 114798212 - HNE_2881 - alpha/beta fold family hydrolase 2826 64.24 0 3039916..3040491 - 191 114798851 - HNE_2882 - glyoxalase family protein 2827 64.01 0 3040899..3041687 - 262 114799905 - HNE_2883 - transglutaminase family protein 2828 63.95 0 3041912..3042757 + 281 114798622 - HNE_2884 - putative neutral zinc metallopeptidase 2829 63.80 0 3042809..3044098 + 429 114799633 - HNE_2885 - O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein 2830 61.07 0 3044119..3044868 - 249 114799239 - HNE_2886 - hypothetical protein 2831 58.02 -1 3044948..3045583 - 211 114798423 - HNE_2887 - hypothetical protein 2832 60.47 0 3045686..3047686 - 666 114797662 rpoD HNE_2888 - RNA polymerase sigma factor RpoD 2833 64.76 0 3047761..3049644 - 627 114799204 dnaG HNE_2889 - DNA primase 2834 59.03 0 3049783..3050568 - 261 114799941 - HNE_2890 - hypothetical protein 2835 65.17 0 3050657..3051124 - 155 114797362 - HNE_2891 - hypothetical protein 2836 63.39 0 3051313..3052473 + 386 114797494 carA HNE_2892 - carbamoyl-phosphate synthase, small subunit 2837 62.04 0 3052527..3053153 - 208 114798879 dxnH HNE_2893 - 3-oxoadipate CoA-succinyl transferase, beta subunit 2838 61.86 0 3053153..3053860 - 235 114799898 dxnG HNE_2894 - 3-oxoadipate CoA-succinyl transferase, alpha subunit 2839 58.48 0 3053879..3054391 - 170 114799761 - HNE_2895 - hypothetical protein 2840 63.71 0 3054544..3055557 - 337 114797317 - HNE_2896 - fumarylacetoacetate hydrolase family protein 2841 54.60 -2 3055580..3056209 - 209 114798664 - HNE_2897 - hypothetical protein 2842 58.01 -1 3055949..3056179 + 76 114800074 - HNE_2898 - hypothetical protein 2843 60.66 0 3056249..3056797 - 182 114797531 - HNE_2899 - glyoxalase family protein 2844 58.86 0 3056797..3057897 - 366 114798568 hppD HNE_2900 - 4-hydroxyphenylpyruvate dioxygenase 2845 62.92 0 3057970..3058449 + 159 114799037 - HNE_2901 - MarR family transcriptional regulator 2846 59.62 0 3058665..3059033 + 122 114799584 - HNE_2902 - hypothetical protein 2847 64.32 0 3059132..3060070 - 312 114800555 - HNE_2903 - alpha/beta fold family hydrolase 2848 61.11 0 3060109..3060234 - 41 114799764 - HNE_2904 - hypothetical protein 2849 61.48 0 3060432..3060797 + 121 114798097 - HNE_2905 - BlaI/MecI/CopY family transcriptional regulator 2850 63.84 0 3060794..3062914 + 706 114798924 - HNE_2906 - M56 family peptidase 2851 63.09 0 3062984..3063430 + 148 114800102 - HNE_2907 - putative lipoprotein 2852 62.73 0 3063449..3064261 + 270 114799298 - HNE_2908 - 3-deoxy-manno-octulosonate cytidylyltransferase 2853 64.83 0 3064266..3064865 + 199 114798766 - HNE_2909 - phosphoglycerate mutase family protein 2854 63.63 0 3064870..3067335 - 821 114797754 pleC HNE_2910 - non-motile and phage-resistance protein 2855 63.50 0 3067367..3069988 - 873 114799938 pepN HNE_2911 - aminopeptidase N 2856 70.22 +2 3070095..3070460 + 121 114799384 - HNE_2912 - hypothetical protein 2857 61.44 0 3070461..3072431 - 656 114798035 - HNE_2913 - hypothetical protein 2858 60.69 0 3072493..3073161 - 222 114800406 - HNE_2914 - hypothetical protein 2859 62.01 0 3073276..3074391 + 371 114800388 - HNE_2915 - acyl-CoA dehydrogenase family protein 2860 60.41 0 3074453..3074995 - 180 114799675 - HNE_2916 - hypothetical protein 2861 60.17 0 3075203..3076402 + 399 114798372 - HNE_2917 - acyl-CoA dehydrogenase 2862 64.25 0 3076442..3077062 - 206 114798421 - HNE_2918 - putative lipoprotein 2863 61.95 0 3077062..3078015 - 317 114799224 - HNE_2919 - virulence factor Mce-like protein 2864 61.85 0 3078030..3078797 - 255 114799973 - HNE_2920 - ABC transporter, ATP-binding protein 2865 61.70 0 3078794..3079921 - 375 114798707 - HNE_2921 - hypothetical protein 2866 67.37 +1 3080011..3081009 + 332 114797771 - HNE_2922 - mandelate racemase/muconate lactonizing enzyme family protein 2867 63.28 0 3081161..3081691 - 176 114799834 - HNE_2923 - hypothetical protein 2868 64.05 0 3081786..3083699 - 637 114798817 - HNE_2924 - ABC transporter, ATP-binding protein 2869 66.50 +1 3083821..3084438 + 205 114797058 - HNE_2925 - acetyltransferase 2870 63.52 0 3084435..3085547 - 370 114799984 - HNE_2926 - hypothetical protein 2871 61.63 0 3085651..3086067 + 138 114800348 - HNE_2927 - thioesterase family protein 2872 68.75 +1 3086093..3086476 + 127 114799845 - HNE_2928 - hypothetical protein 2873 61.30 0 3086458..3087072 - 204 114798618 - HNE_2929 - putative lipoprotein 2874 61.16 0 3087157..3088173 + 338 114798234 pip HNE_2930 - prolyl aminopeptidase 2875 53.56 -2 3088264..3088614 + 116 114799380 - HNE_2931 - hypothetical protein 2876 60.41 0 3089214..3090635 - 473 114799725 - HNE_2932 - sodium-dependent symporter family protein 2877 63.12 0 3090718..3091845 - 375 114797109 rodA HNE_2933 - rod shape-determining protein RodA 2878 65.24 0 3091950..3093905 - 651 114797905 mrdA HNE_2934 - penicillin-binding protein 2 2879 62.86 0 3093902..3094453 - 183 114798654 - HNE_2935 - hypothetical protein 2880 66.96 +1 3094456..3095490 - 344 114799374 - HNE_2936 - putative rod shape-determining protein MreC 2881 60.81 0 3095529..3096569 - 346 114800181 mreB HNE_2937 - rod shape-determining protein MreB 2882 63.64 0 3097054..3099399 - 781 114798822 - HNE_2938 - putative DNA helicase II 2883 61.49 0 3099565..3101265 + 566 114798357 - HNE_2939 - AsmA family protein 2884 65.43 0 3101340..3102068 + 242 114798129 - HNE_2940 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0