version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2700 66.03 +1 2915483..2916106 + 207 114797072 rnhB HNE_2755 - ribonuclease HIII 2701 64.54 0 2916153..2916623 + 156 114799084 - HNE_2756 - GIY-YIG domain-containing protein 2702 67.61 +1 2916630..2917685 - 351 114797801 queA HNE_2757 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2703 62.80 0 2917718..2918701 - 327 114800546 - HNE_2758 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 2704 56.22 -1 2918698..2919195 - 165 114799402 coaD HNE_2759 - pantetheine-phosphate adenylyltransferase 2705 63.75 0 2919249..2922029 - 926 114798624 gyrA HNE_2760 - DNA gyrase, A subunit 2706 69.98 +2 2922207..2923262 + 351 114798250 - HNE_2761 - kelch repeat-containing protein 2707 63.64 0 2923295..2923954 + 219 114800326 - HNE_2762 - glutathione S-transferase 2708 67.03 +1 2923963..2924784 - 273 114799804 - HNE_2763 - putative beta-lactamase 2709 62.20 0 2924846..2925337 - 163 114797480 ssb HNE_2764 - single-strand binding protein 2710 61.90 0 2925564..2928542 + 992 114798706 uvrA HNE_2765 - excinuclease ABC, A subunit 2711 60.86 0 2928560..2929540 - 326 114799509 - HNE_2766 - hypothetical protein 2712 65.20 0 2929595..2930410 - 271 114800262 - HNE_2767 - hypothetical protein 2713 62.39 0 2930509..2931912 + 467 114797503 gid HNE_2768 - tRNA (uracil-5-)-methyltransferase Gid 2714 62.50 0 2931918..2932805 + 295 114797440 - HNE_2769 - PP-loop family protein 2715 61.55 0 2932806..2934095 - 429 114799393 - HNE_2770 - acyl-CoA dehydrogenase family protein 2716 67.58 +1 2934191..2935504 - 437 114799900 - HNE_2771 - putative DNA-damage-inducible protein F 2717 61.37 0 2935604..2936905 - 433 114797831 - HNE_2772 - acyl-CoA dehydrogenase family protein 2718 65.06 0 2937036..2937782 + 248 114799162 - HNE_2773 - hypothetical protein 2719 65.66 0 2937953..2938846 + 297 114799906 - HNE_2774 - LysR family transcriptional regulator 2720 65.23 0 2938870..2940606 - 578 114800280 - HNE_2775 - glutathione-regulated potassium-efflux system protein 2721 70.07 +2 2940664..2941104 - 146 114798136 - HNE_2776 - cytidine/deoxycytidylate deaminase family protein 2722 64.28 0 2941194..2941862 - 222 114799259 - HNE_2777 - enoyl-CoA hydratase/isomerase family protein 2723 67.56 +1 2942008..2942568 + 186 114800273 - HNE_2778 - putative methyltransferase 2724 62.80 0 2942565..2942978 - 137 114797727 - HNE_2779 - hypothetical protein 2725 62.98 0 2943054..2944085 - 343 114797322 - HNE_2780 - patatin family phospholipase 2726 70.74 +2 2944171..2945421 + 416 114799366 - HNE_2781 - putative 23S rRNA (uracil-5-)-methyltransferase RumA 2727 69.80 +2 2945418..2945864 + 148 114798768 - HNE_2782 - NUDIX family hydrolase NudH subfamily hydrolase 2728 63.61 0 2946035..2946820 + 261 114797788 - HNE_2783 - short chain dehydrogenase/reductase family oxidoreductase 2729 58.48 0 2946938..2947267 + 109 114799889 - HNE_2784 - hypothetical protein 2730 57.22 -1 2947385..2947744 - 119 114798807 - HNE_2785 - hypothetical protein 2731 63.60 0 2947962..2948939 + 325 114798273 - HNE_2786 - trans-2-enoyl-ACP reductase II 2732 59.20 0 2948987..2949991 - 334 114800373 corA HNE_2787 - magnesium and cobalt transport protein CorA 2733 61.84 0 2950058..2951239 - 393 114799604 - HNE_2788 - glucose/sorbosone family dehydrogenase 2734 64.06 0 2951264..2952259 - 331 114798418 - HNE_2789 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 2735 62.56 0 2952239..2952676 + 145 114799433 - HNE_2790 - hypothetical protein 2736 65.46 0 2952673..2954583 + 636 114798236 ggt1 HNE_2791 - gamma-glutamyltransferase 2737 64.09 0 2954573..2955232 + 219 114797491 - HNE_2792 - uracil-DNA glycosylase family protein 2738 63.85 0 2955229..2955867 - 212 114799696 - HNE_2793 - TetR family transcriptional regulator 2739 65.02 0 2955949..2956980 + 343 114799652 - HNE_2794 - phosphotransferase enzyme family protein 2740 61.04 0 2957024..2958250 + 408 114798453 - HNE_2795 - putative acyl-CoA dehydrogenase 2741 65.04 0 2958275..2959318 + 347 114797612 - HNE_2796 - alcohol dehydrogenase, class III 2742 65.40 0 2959410..2960672 + 420 114800014 - HNE_2797 - cytochrome P450 family protein 2743 50.51 -2 2960739..2961332 - 197 114799234 - HNE_2798 - phosphoprotein phosphatase 2744 63.79 0 2961333..2961818 - 161 114797634 smpB HNE_2799 - SsrA-binding protein 2745 65.08 0 2961828..2962709 - 293 114798403 dapA HNE_2800 - dihydrodipicolinate synthase 2746 68.40 +1 2962811..2965003 + 730 114800029 - HNE_2801 - Slt family transglycosylase 2747 58.33 -1 2965327..2965722 + 131 114797083 - HNE_2802 - hypothetical protein 2748 59.99 0 2965861..2967297 - 478 114797304 calB HNE_2803 - coniferyl aldehyde dehydrogenase 2749 64.92 0 2967465..2968265 + 266 114798301 - HNE_2804 - enoyl-CoA hydratase 2750 61.55 0 2968364..2968852 + 162 114800167 - HNE_2805 - hypothetical protein 2751 60.05 0 2968855..2969232 - 125 114797631 - HNE_2806 - TfoX domain-containing protein 2752 59.86 0 2969231..2969524 + 97 114797266 - HNE_2808 - hypothetical protein 2753 64.39 0 2969249..2969380 - 43 114798438 - HNE_2807 - hypothetical protein 2754 61.57 0 2969503..2970699 - 398 114799425 - HNE_2809 - beta-lactamase 2755 62.45 0 2970738..2971898 - 386 114797804 - HNE_2810 - acyl-CoA dehydrogenase 2756 60.65 0 2972010..2972441 + 143 114799197 - HNE_2811 - thioesterase family protein 2757 60.61 0 2972438..2973229 + 263 114799740 - HNE_2812 - short chain dehydrogenase/reductase family oxidoreductase 2758 66.63 +1 2973328..2975991 - 887 114797546 - HNE_2813 - M1 family peptidase 2759 61.30 0 2978025..2978639 - 204 114798409 - HNE_2815 - glutathione S-transferase 2760 65.79 +1 2978650..2980584 - 644 114799151 - HNE_2816 - putative TonB-dependent receptor 2761 64.57 0 2980743..2982032 - 429 114800517 - HNE_2817 - NupC family nucleoside transporter 2762 62.47 0 2982243..2983790 + 515 114797922 - HNE_2818 - serine carboxypeptidase family protein 2763 64.75 0 2984329..2984694 - 121 114798926 - HNE_2819 - glyoxalase family protein 2764 63.52 0 2984839..2985759 + 306 114800383 - HNE_2820 - short chain dehydrogenase/reductase family oxidoreductase 2765 65.33 0 2985826..2986200 + 124 114797599 - HNE_2821 - Kazal domain-containing protein 2766 67.98 +1 2986216..2986443 - 75 114798377 - HNE_2822 - hypothetical protein 2767 57.79 -1 2986459..2987055 - 198 114799134 - HNE_2823 - hypothetical protein 2768 70.14 +2 2987157..2988221 - 354 114800085 - HNE_2824 - hypothetical protein 2769 62.37 0 2988553..2989926 - 457 114799107 - HNE_2825 - Ser/Thr protein phosphatase family protein 2770 61.94 0 2990103..2990525 - 140 114797079 rplQ HNE_2826 - ribosomal protein L17 2771 60.16 0 2990570..2991598 - 342 114798821 rpoA HNE_2827 - DNA-directed RNA polymerase subunit alpha 2772 62.05 0 2991654..2992043 - 129 114799611 rpsK HNE_2828 - 30S ribosomal protein S11 2773 57.99 -1 2992057..2992425 - 122 114800366 rpsM HNE_2829 - 30S ribosomal protein S13 2774 62.11 0 2992574..2993143 - 189 114797627 adk HNE_2830 - adenylate kinase 2775 58.92 0 2993140..2994495 - 451 114797687 secY HNE_2831 - preprotein translocase, SecY subunit 2776 63.96 0 2994585..2995064 - 159 114797152 rplO HNE_2832 - ribosomal protein L15 2777 61.29 0 2995117..2995302 - 61 114798424 rpmD HNE_2833 - ribosomal protein L30 2778 64.01 0 2995315..2995917 - 200 114799166 rpsE HNE_2834 - 30S ribosomal protein S5 2779 63.09 0 2995931..2996293 - 120 114798156 rplR HNE_2835 - ribosomal protein L18 2780 60.95 0 2996298..2996909 - 203 114797429 rplF HNE_2836 - ribosomal protein L6 2781 57.32 -1 2996922..2997317 - 131 114799650 rpsH HNE_2837 - ribosomal protein S8 2782 60.78 0 2997334..2997639 - 101 114798922 rpsN HNE_2838 - ribosomal protein S14 2783 57.30 -1 2997659..2998213 - 184 114797583 rplE HNE_2839 - 50S ribosomal protein L5 2784 58.18 -1 2998206..2998523 - 105 114799152 rplX HNE_2840 - ribosomal protein L24 2785 61.25 0 2998526..2998894 - 122 114799563 rplN HNE_2841 - ribosomal protein L14 2786 54.07 -2 2998891..2999136 - 81 114798486 rpsQ HNE_2842 - ribosomal protein S17 2787 55.56 -1 2999148..2999345 - 65 114799564 rpmC HNE_2843 - ribosomal protein L29 2788 60.91 0 2999348..2999764 - 138 114798200 rplP HNE_2844 - 50S ribosomal protein L16 2789 61.38 0 2999768..3000505 - 245 114797822 rpsC HNE_2845 - ribosomal protein S3 2790 61.54 0 3000505..3000894 - 129 114799750 rplV HNE_2846 - 50S ribosomal protein L22 2791 56.27 -1 3000897..3001175 - 92 114799147 rpsS HNE_2847 - ribosomal protein S19 2792 61.49 0 3001194..3002024 - 276 114798100 rplB HNE_2848 - 50S ribosomal protein L2 2793 53.67 -2 3002043..3002342 - 99 114799096 rplW HNE_2849 - ribosomal protein L23 2794 60.47 0 3002342..3002986 - 214 114799746 rplD HNE_2850 - 50S ribosomal protein L4 2795 61.26 0 3002986..3003744 - 252 114797091 rplC HNE_2851 - ribosomal protein L3 2796 59.50 0 3003744..3004064 - 106 114798629 rpsJ HNE_2852 - ribosomal protein S10 2797 62.05 0 3004398..3005588 - 396 114799428 tuf2 HNE_2853 - elongation factor Tu 2798 60.08 0 3005625..3007748 - 707 114800238 fusA HNE_2854 - elongation factor G 2799 60.30 0 3007836..3008306 - 156 114799363 rpsG HNE_2855 - 30S ribosomal protein S7 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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