version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2211 62.08 0 2351222..2352595 + 457 114798573 accC HNE_2250 - acetyl-CoA carboxylase, biotin carboxylase 2212 62.03 0 2352653..2353429 + 258 114797414 aat HNE_2251 - leucyl/phenylalanyl-tRNA--protein transferase 2213 60.72 0 2353273..2353827 - 184 114799292 - HNE_2252 - hypothetical protein 2214 60.93 0 2353824..2354381 - 185 114797425 - HNE_2253 - hypothetical protein 2215 61.07 0 2354374..2354766 - 130 114798194 - HNE_2254 - putative NADH:ubiquinone oxidoreductase 2216 66.27 +1 2354987..2357239 + 750 114799028 - HNE_2255 - ribonucleoside reductase-like protein 2217 63.69 0 2357402..2358139 + 245 114799805 - HNE_2256 - pentapeptide repeat-containing protein 2218 62.95 0 2358217..2360046 - 609 114800235 aspS HNE_2257 - aspartyl-tRNA synthetase 2219 62.47 0 2360145..2361311 + 388 114797633 rnd HNE_2258 - ribonuclease D 2220 61.16 0 2361319..2362806 - 495 114800396 - HNE_2259 - Ppx/GppA family phosphatase 2221 59.09 0 2362803..2364980 - 725 114799243 ppk HNE_2260 - polyphosphate kinase 2222 64.48 0 2365009..2365740 - 243 114798512 - HNE_2261 - hypothetical protein 2223 66.27 +1 2365737..2366756 - 339 114800481 - HNE_2262 - hypothetical protein 2224 64.92 0 2366903..2367931 + 342 114798932 purM HNE_2263 - phosphoribosylformylglycinamidine cyclo-ligase 2225 65.64 0 2367928..2368512 + 194 114797986 purN HNE_2264 - phosphoribosylglycinamide formyltransferase 2226 64.13 0 2368620..2368934 + 104 114798803 - HNE_2265 - hypothetical protein 2227 62.60 0 2368931..2369962 + 343 114798815 - HNE_2266 - zinc-binding dehydrogenase family oxidoreductase 2228 60.33 0 2369969..2370394 - 141 114799837 - HNE_2267 - hypothetical protein 2229 58.91 0 2370394..2370741 - 115 114797737 - HNE_2268 - hypothetical protein 2230 61.70 0 2371007..2371429 - 140 114798716 ndk HNE_2269 - nucleoside diphosphate kinase 2231 63.10 0 2371581..2371916 + 111 114799351 - HNE_2270 - hypothetical protein 2232 55.19 -1 2372236..2372688 + 150 114797382 - HNE_2271 - acetyltransferase 2233 66.67 +1 2372760..2373230 - 156 114798143 - HNE_2272 - putative DNA polymerase III chi subunit 2234 65.17 0 2373332..2374798 - 488 114798964 - HNE_2273 - M17 family peptidase 2235 61.85 0 2374920..2376062 + 380 114799726 - HNE_2274 - putative permease 2236 62.66 0 2376062..2377183 + 373 114797396 - HNE_2275 - YjgP/YjgQ permease 2237 62.52 0 2377254..2379833 + 859 114799315 topA HNE_2276 - DNA topoisomerase I 2238 60.77 0 2379899..2380237 + 112 114797090 - HNE_2277 - hypothetical protein 2239 65.28 0 2380257..2380616 - 119 114798135 - HNE_2278 - hypothetical protein 2240 67.50 +1 2380303..2380662 + 119 114799106 - HNE_2279 - hypothetical protein 2241 64.92 0 2380722..2383016 + 764 114800052 rnr HNE_2280 - ribonuclease R 2242 67.22 +1 2383121..2383837 + 238 114797540 - HNE_2281 - NUDIX family hydrolase 2243 50.60 -2 2383994..2384161 + 55 114798587 rpmG HNE_2282 - 50S ribosomal protein L33 2244 65.04 0 2384225..2385451 - 408 114799591 - HNE_2283 - major facilitator transporter 2245 64.18 0 2385513..2386880 - 455 114798852 pleD HNE_2284 - response regulator PleD 2246 58.84 0 2386877..2387272 - 131 114799980 - HNE_2285 - cell division response regulator DivK 2247 63.69 0 2387408..2388682 + 424 114798874 - HNE_2286 - DNA polymerase IV 2248 65.80 +1 2388738..2389199 + 153 114798769 - HNE_2287 - putative endoribonuclease L-PSP 2249 66.80 +1 2389208..2389942 + 244 114797187 - HNE_2288 - glycerophosphoryl diester phosphodiesterase family protein 2250 62.62 0 2389954..2391114 + 386 114799871 - HNE_2289 - hypothetical protein 2251 60.92 0 2391123..2391557 + 144 114799198 - HNE_2290 - histidine triad family protein 2252 60.97 0 2391615..2393123 - 502 114798220 gatB HNE_2291 - aspartyl/glutamyl-tRNA amidotransferase subunit B 2253 66.11 +1 2393216..2393755 - 179 114800360 - HNE_2292 - hypothetical protein 2254 62.73 0 2393715..2395187 - 490 114799311 gatA HNE_2293 - glutamyl-tRNA(Gln) amidotransferase, A subunit 2255 62.88 0 2395231..2395758 + 175 114798765 - HNE_2294 - hypothetical protein 2256 57.81 -1 2395813..2396196 + 127 114797783 - HNE_2295 - SET domain-containing protein 2257 64.12 0 2396245..2397384 + 379 114799439 - HNE_2296 - zinc-binding dehydrogenase family oxidoreductase 2258 53.66 -2 2397501..2397746 + 81 114797865 - HNE_2298 - hypothetical protein 2259 53.49 -2 2397558..2397686 - 42 114798687 - HNE_2297 - hypothetical protein 2260 61.11 0 2397803..2398090 - 95 114800240 gatC HNE_2299 - glutamyl-tRNA(Gln) amidotransferase, C subunit 2261 68.20 +1 2398166..2398621 + 151 114799411 - HNE_2300 - hypothetical protein 2262 68.82 +1 2398618..2399544 + 308 114797332 - HNE_2301 - auxin efflux carrier family protein 2263 63.71 0 2399600..2400547 + 315 114800183 pyrB HNE_2302 - aspartate carbamoyltransferase 2264 66.74 +1 2400544..2401824 + 426 114798896 - HNE_2303 - putative dihydroorotase 2265 65.51 0 2401828..2403303 + 491 114799781 - HNE_2304 - MATE efflux family protein 2266 61.19 0 2403384..2403785 + 133 114798590 - HNE_2305 - hypothetical protein 2267 62.50 0 2403764..2404363 + 199 114797263 - HNE_2306 - acetyltransferase 2268 64.26 0 2404423..2406087 + 554 114798019 - HNE_2307 - M20/M25/M40 family peptidase 2269 62.34 0 2406268..2407815 + 515 114799617 - HNE_2308 - AMP-binding protein 2270 64.78 0 2407964..2408917 - 317 114800431 glpX HNE_2309 - fructose 1,6-bisphosphatase II 2271 65.58 0 2408970..2410253 - 427 114797674 hom HNE_2310 - homoserine dehydrogenase 2272 63.87 0 2410768..2411982 - 404 114798447 - HNE_2311 - aminotransferase, classes I and II 2273 60.71 0 2411990..2412409 - 139 114797962 - HNE_2312 - putative lipoprotein 2274 61.76 0 2412480..2414312 + 610 114799177 - HNE_2313 - PHA/PHB synthase family protein 2275 61.86 0 2414341..2415276 - 311 114800501 argC HNE_2314 - N-acetyl-gamma-glutamyl-phosphate reductase 2276 62.73 0 2415362..2415844 - 160 114800252 rpsI HNE_2315 - 30S ribosomal protein S9 2277 57.85 -1 2415852..2416316 - 154 114797444 rplM HNE_2316 - 50S ribosomal protein L13 2278 66.41 +1 2416534..2417319 + 261 114797290 - HNE_2317 - hypothetical protein 2279 66.57 +1 2417303..2418358 - 351 114800338 - HNE_2318 - cytochrome c oxidase assembly protein 2280 65.64 0 2418373..2418663 + 96 114798793 - HNE_2319 - hypothetical protein 2281 62.59 0 2418981..2419568 - 195 114799297 - HNE_2320 - TetR family transcriptional regulator 2282 67.15 +1 2419779..2421032 + 417 114798989 - HNE_2321 - putative 4-hydroxybutyrate coenzyme A transferase 2283 63.47 0 2421091..2422029 - 312 114799493 - HNE_2322 - ISHne5, transposase 2284 63.33 0 2422353..2423522 - 389 114797462 - HNE_2323 - CAIB/BAIF family protein 2285 63.18 0 2423535..2423936 - 133 114798214 - HNE_2324 - thioesterase family protein 2286 63.45 0 2424101..2425561 + 486 114799189 gabD HNE_2325 - succinate-semialdehyde dehydrogenase 2287 61.30 0 2425571..2426353 - 260 114797938 - HNE_2326 - AraC family transcriptional regulator 2288 61.43 0 2426533..2427258 - 241 114798869 - HNE_2327 - hypothetical protein 2289 62.71 0 2427315..2430548 - 1077 114798295 - HNE_2328 - amidohydrolase family protein 2290 55.36 -1 2430629..2432803 - 724 114797335 - HNE_2329 - outer membrane receptor (OMR) family protein 2291 61.17 0 2433047..2434246 + 399 114800312 - HNE_2330 - PepSY-associated TM helix domain-containing protein 2292 68.54 +1 2434306..2435265 + 319 114799294 - HNE_2331 - alpha/beta fold family hydrolase 2293 67.19 +1 2435262..2435834 + 190 114798709 - HNE_2332 - hypothetical protein 2294 67.10 +1 2435856..2437466 + 536 114799705 pruA HNE_2333 - 1-pyrroline-5-carboxylate dehydrogenase 2295 65.40 0 2437466..2438887 + 473 114798937 - HNE_2334 - sodium/alanine symporter family protein 2296 61.78 0 2439072..2440484 - 470 114800328 - HNE_2335 - aldehyde dehydrogenase family protein 2297 59.33 0 2441015..2441818 - 267 114799578 - HNE_2336 - Ser/Thr protein phosphatase family protein 2298 59.93 0 2441815..2442660 - 281 114799260 - HNE_2337 - hypothetical protein 2299 54.58 -2 2442664..2442936 - 90 114800505 - HNE_2338 - hypothetical protein 2300 61.18 0 2443047..2444651 - 534 114797856 - HNE_2339 - sensor histidine kinase 2301 59.74 0 2444720..2445325 - 201 114798823 - HNE_2340 - ECF subfamily RNA polymerase sigma factor 2302 56.67 -1 2445307..2445606 + 99 114797486 - HNE_2342 - hypothetical protein 2303 57.14 -1 2445322..2445531 - 69 114798824 - HNE_2341 - hypothetical protein 2304 50.79 -2 2445552..2445677 - 41 114800003 - HNE_2343 - hypothetical protein 2305 58.94 0 2445725..2446513 + 262 114798202 - HNE_2344 - two-component response regulator 2306 59.38 0 2446580..2446936 + 118 114797451 - HNE_2345 - hypothetical protein 2307 60.46 0 2446939..2447373 + 144 114797998 - HNE_2346 - hypothetical protein 2308 60.88 0 2447399..2449246 + 615 114797876 - HNE_2347 - TrkA domain-containing protein 2309 56.67 -1 2449278..2449517 + 79 114798430 - HNE_2348 - hypothetical protein 2310 55.70 -1 2449673..2449909 + 78 114798122 - HNE_2349 - CsbD-like protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0