version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2181 61.61 0 2319423..2320886 + 487 114799609 - HNE_2219 - aldehyde dehydrogenase family protein 2182 60.42 0 2321028..2321780 + 250 114800399 - HNE_2220 - class II aldolase/adducin domain-containing protein 2183 63.13 0 2321796..2322728 - 310 114800019 - HNE_2221 - short chain dehydrogenase/reductase family oxidoreductase 2184 58.84 0 2322946..2323839 - 297 114798404 - HNE_2222 - AraC family transcriptional regulator 2185 64.77 0 2324003..2325319 + 438 114799244 - HNE_2223 - major facilitator family transporter 2186 60.86 0 2325531..2326322 + 263 114800020 - HNE_2224 - MipA family protein 2187 60.39 0 2326743..2327714 - 323 114797195 - HNE_2225 - aldo/keto reductase family oxidoreductase 2188 64.17 0 2327850..2328731 + 293 114798010 - HNE_2226 - AraC family transcriptional regulator 2189 62.20 0 2328883..2329374 - 163 114797318 - HNE_2227 - hypothetical protein 2190 63.20 0 2329387..2330280 - 297 114798645 - HNE_2228 - NAD-dependent epimerase/dehydratase family protein 2191 65.56 0 2330384..2331193 + 269 114799172 - HNE_2229 - putative transcriptional regulator 2192 66.67 +1 2331874..2332653 - 259 114799955 cobA HNE_2230 - uroporphyrin-III C-methyltransferase 2193 62.87 0 2332650..2333861 - 403 114800210 - HNE_2231 - putative lipoprotein 2194 67.02 +1 2334064..2335206 - 380 114797910 - HNE_2232 - putative nitrate transporter 2195 64.12 0 2335203..2335949 - 248 114799661 nasT HNE_2233 - response regulator NasT 2196 62.99 0 2336181..2338652 + 823 114800413 nirB HNE_2234 - nitrite reductase [NAD(P)H], large subunit 2197 67.82 +1 2338649..2338996 + 115 114797238 nirD HNE_2235 - nitrite reductase [NAD(P)H], small subunit 2198 61.45 0 2339011..2339853 + 280 114797947 fnt HNE_2236 - formate/nitrite transporter 2199 67.94 +1 2339859..2341583 + 574 114798196 - HNE_2237 - carbohydrate kinase 2200 56.19 -1 2342080..2342184 - 34 114798183 - HNE_2239 - hypothetical protein 2201 65.09 0 2342174..2342869 - 231 114797199 - HNE_2240 - hypothetical protein 2202 66.60 +1 2342950..2344371 - 473 114800524 - HNE_2241 - putative chain length determinant protein 2203 62.87 0 2344554..2345501 + 315 114799572 - HNE_2242 - 2OG-Fe(II) oxygenase family oxidoreductase 2204 63.59 0 2345591..2346727 + 378 114797797 - HNE_2243 - aminotransferase 2205 62.84 0 2346810..2348351 - 513 114800349 pepA HNE_2244 - cytosol aminopeptidase 2206 62.09 0 2348467..2349099 - 210 114799358 - HNE_2245 - HAD family hydrolase 2207 64.04 0 2349106..2349903 - 265 114799032 thiG HNE_2246 - thiazole synthase 2208 63.85 0 2350028..2350240 - 70 114798481 thiS HNE_2247 - thiamine biosynthesis protein ThiS 2209 59.23 0 2350304..2350747 + 147 114797900 aroQ HNE_2248 - 3-dehydroquinate dehydratase 2210 62.21 0 2350750..2351220 + 156 114797700 accB HNE_2249 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 2211 62.08 0 2351222..2352595 + 457 114798573 accC HNE_2250 - acetyl-CoA carboxylase, biotin carboxylase 2212 62.03 0 2352653..2353429 + 258 114797414 aat HNE_2251 - leucyl/phenylalanyl-tRNA--protein transferase 2213 60.72 0 2353273..2353827 - 184 114799292 - HNE_2252 - hypothetical protein 2214 60.93 0 2353824..2354381 - 185 114797425 - HNE_2253 - hypothetical protein 2215 61.07 0 2354374..2354766 - 130 114798194 - HNE_2254 - putative NADH:ubiquinone oxidoreductase 2216 66.27 +1 2354987..2357239 + 750 114799028 - HNE_2255 - ribonucleoside reductase-like protein 2217 63.69 0 2357402..2358139 + 245 114799805 - HNE_2256 - pentapeptide repeat-containing protein 2218 62.95 0 2358217..2360046 - 609 114800235 aspS HNE_2257 - aspartyl-tRNA synthetase 2219 62.47 0 2360145..2361311 + 388 114797633 rnd HNE_2258 - ribonuclease D 2220 61.16 0 2361319..2362806 - 495 114800396 - HNE_2259 - Ppx/GppA family phosphatase 2221 59.09 0 2362803..2364980 - 725 114799243 ppk HNE_2260 - polyphosphate kinase 2222 64.48 0 2365009..2365740 - 243 114798512 - HNE_2261 - hypothetical protein 2223 66.27 +1 2365737..2366756 - 339 114800481 - HNE_2262 - hypothetical protein 2224 64.92 0 2366903..2367931 + 342 114798932 purM HNE_2263 - phosphoribosylformylglycinamidine cyclo-ligase 2225 65.64 0 2367928..2368512 + 194 114797986 purN HNE_2264 - phosphoribosylglycinamide formyltransferase 2226 64.13 0 2368620..2368934 + 104 114798803 - HNE_2265 - hypothetical protein 2227 62.60 0 2368931..2369962 + 343 114798815 - HNE_2266 - zinc-binding dehydrogenase family oxidoreductase 2228 60.33 0 2369969..2370394 - 141 114799837 - HNE_2267 - hypothetical protein 2229 58.91 0 2370394..2370741 - 115 114797737 - HNE_2268 - hypothetical protein 2230 61.70 0 2371007..2371429 - 140 114798716 ndk HNE_2269 - nucleoside diphosphate kinase 2231 63.10 0 2371581..2371916 + 111 114799351 - HNE_2270 - hypothetical protein 2232 55.19 -1 2372236..2372688 + 150 114797382 - HNE_2271 - acetyltransferase 2233 66.67 +1 2372760..2373230 - 156 114798143 - HNE_2272 - putative DNA polymerase III chi subunit 2234 65.17 0 2373332..2374798 - 488 114798964 - HNE_2273 - M17 family peptidase 2235 61.85 0 2374920..2376062 + 380 114799726 - HNE_2274 - putative permease 2236 62.66 0 2376062..2377183 + 373 114797396 - HNE_2275 - YjgP/YjgQ permease 2237 62.52 0 2377254..2379833 + 859 114799315 topA HNE_2276 - DNA topoisomerase I 2238 60.77 0 2379899..2380237 + 112 114797090 - HNE_2277 - hypothetical protein 2239 65.28 0 2380257..2380616 - 119 114798135 - HNE_2278 - hypothetical protein 2240 67.50 +1 2380303..2380662 + 119 114799106 - HNE_2279 - hypothetical protein 2241 64.92 0 2380722..2383016 + 764 114800052 rnr HNE_2280 - ribonuclease R 2242 67.22 +1 2383121..2383837 + 238 114797540 - HNE_2281 - NUDIX family hydrolase 2243 50.60 -2 2383994..2384161 + 55 114798587 rpmG HNE_2282 - 50S ribosomal protein L33 2244 65.04 0 2384225..2385451 - 408 114799591 - HNE_2283 - major facilitator transporter 2245 64.18 0 2385513..2386880 - 455 114798852 pleD HNE_2284 - response regulator PleD 2246 58.84 0 2386877..2387272 - 131 114799980 - HNE_2285 - cell division response regulator DivK 2247 63.69 0 2387408..2388682 + 424 114798874 - HNE_2286 - DNA polymerase IV 2248 65.80 +1 2388738..2389199 + 153 114798769 - HNE_2287 - putative endoribonuclease L-PSP 2249 66.80 +1 2389208..2389942 + 244 114797187 - HNE_2288 - glycerophosphoryl diester phosphodiesterase family protein 2250 62.62 0 2389954..2391114 + 386 114799871 - HNE_2289 - hypothetical protein 2251 60.92 0 2391123..2391557 + 144 114799198 - HNE_2290 - histidine triad family protein 2252 60.97 0 2391615..2393123 - 502 114798220 gatB HNE_2291 - aspartyl/glutamyl-tRNA amidotransferase subunit B 2253 66.11 +1 2393216..2393755 - 179 114800360 - HNE_2292 - hypothetical protein 2254 62.73 0 2393715..2395187 - 490 114799311 gatA HNE_2293 - glutamyl-tRNA(Gln) amidotransferase, A subunit 2255 62.88 0 2395231..2395758 + 175 114798765 - HNE_2294 - hypothetical protein 2256 57.81 -1 2395813..2396196 + 127 114797783 - HNE_2295 - SET domain-containing protein 2257 64.12 0 2396245..2397384 + 379 114799439 - HNE_2296 - zinc-binding dehydrogenase family oxidoreductase 2258 53.66 -2 2397501..2397746 + 81 114797865 - HNE_2298 - hypothetical protein 2259 53.49 -2 2397558..2397686 - 42 114798687 - HNE_2297 - hypothetical protein 2260 61.11 0 2397803..2398090 - 95 114800240 gatC HNE_2299 - glutamyl-tRNA(Gln) amidotransferase, C subunit 2261 68.20 +1 2398166..2398621 + 151 114799411 - HNE_2300 - hypothetical protein 2262 68.82 +1 2398618..2399544 + 308 114797332 - HNE_2301 - auxin efflux carrier family protein 2263 63.71 0 2399600..2400547 + 315 114800183 pyrB HNE_2302 - aspartate carbamoyltransferase 2264 66.74 +1 2400544..2401824 + 426 114798896 - HNE_2303 - putative dihydroorotase 2265 65.51 0 2401828..2403303 + 491 114799781 - HNE_2304 - MATE efflux family protein 2266 61.19 0 2403384..2403785 + 133 114798590 - HNE_2305 - hypothetical protein 2267 62.50 0 2403764..2404363 + 199 114797263 - HNE_2306 - acetyltransferase 2268 64.26 0 2404423..2406087 + 554 114798019 - HNE_2307 - M20/M25/M40 family peptidase 2269 62.34 0 2406268..2407815 + 515 114799617 - HNE_2308 - AMP-binding protein 2270 64.78 0 2407964..2408917 - 317 114800431 glpX HNE_2309 - fructose 1,6-bisphosphatase II 2271 65.58 0 2408970..2410253 - 427 114797674 hom HNE_2310 - homoserine dehydrogenase 2272 63.87 0 2410768..2411982 - 404 114798447 - HNE_2311 - aminotransferase, classes I and II 2273 60.71 0 2411990..2412409 - 139 114797962 - HNE_2312 - putative lipoprotein 2274 61.76 0 2412480..2414312 + 610 114799177 - HNE_2313 - PHA/PHB synthase family protein 2275 61.86 0 2414341..2415276 - 311 114800501 argC HNE_2314 - N-acetyl-gamma-glutamyl-phosphate reductase 2276 62.73 0 2415362..2415844 - 160 114800252 rpsI HNE_2315 - 30S ribosomal protein S9 2277 57.85 -1 2415852..2416316 - 154 114797444 rplM HNE_2316 - 50S ribosomal protein L13 2278 66.41 +1 2416534..2417319 + 261 114797290 - HNE_2317 - hypothetical protein 2279 66.57 +1 2417303..2418358 - 351 114800338 - HNE_2318 - cytochrome c oxidase assembly protein 2280 65.64 0 2418373..2418663 + 96 114798793 - HNE_2319 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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