version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2151 62.02 0 2283140..2284495 + 451 114798801 - HNE_2189 - heavy metal sensor histidine kinase 2152 62.01 0 2284598..2287774 - 1058 114797722 - HNE_2190 - AcrB/AcrD/AcrF family protein 2153 66.30 +1 2287828..2288928 - 366 114797259 - HNE_2191 - RND family efflux transporter MFP subunit 2154 63.61 0 2289126..2290040 - 304 114799757 - HNE_2192 - short chain dehydrogenase/reductase family oxidoreductase 2155 58.28 -1 2290265..2290729 + 154 114800040 - HNE_2193 - MarR family transcriptional regulator 2156 62.38 0 2290726..2291541 + 271 114798483 - HNE_2194 - hypothetical protein 2157 60.63 0 2291562..2292008 - 148 114797925 - HNE_2195 - DoxX family protein 2158 63.56 0 2292141..2293235 - 364 114799498 - HNE_2196 - short chain dehydrogenase/reductase family oxidoreductase 2159 67.39 +1 2293336..2294025 - 229 114798698 - HNE_2197 - hypothetical protein 2160 59.92 0 2294035..2294508 - 157 114799027 - HNE_2198 - hypothetical protein 2161 61.58 0 2294646..2295569 - 307 114799755 - HNE_2199 - AraC family transcriptional regulator 2162 59.69 0 2296179..2296637 + 152 114800410 - HNE_2200 - putative isoquinoline 1-oxidoreductase, alpha subunit 2163 64.59 0 2296615..2297337 + 240 114797647 - HNE_2201 - hypothetical protein 2164 62.21 0 2297397..2299526 + 709 114797470 - HNE_2202 - putative isoquinoline 1-oxidoreductase, beta subunit 2165 58.55 0 2299572..2300150 - 192 114798163 - HNE_2203 - sulfatase domain-containing protein 2166 60.23 0 2300264..2301304 - 346 114798933 - HNE_2204 - aldo/keto reductase family oxidoreductase 2167 64.85 0 2301362..2302186 - 274 114799710 - HNE_2205 - short chain dehydrogenase/reductase family oxidoreductase 2168 63.41 0 2302532..2303299 + 255 114797204 - HNE_2206 - GntR family transcriptional regulator 2169 58.49 0 2303327..2304622 - 431 114798191 - HNE_2207 - cytochrome P450 family protein 2170 62.08 0 2304653..2306332 - 559 114799635 - HNE_2208 - hypothetical protein 2171 63.66 0 2306592..2307290 - 232 114800415 - HNE_2209 - TetR family transcriptional regulator 2172 59.35 0 2307522..2309858 + 778 114797247 - HNE_2210 - outer membrane receptor (OMR) family protein 2173 61.23 0 2309894..2311567 + 557 114798044 - HNE_2211 - sulfatase family protein 2174 61.54 0 2311633..2312724 + 363 114800456 - HNE_2212 - hypothetical protein 2175 65.71 0 2312775..2314349 - 524 114797649 - HNE_2213 - hypothetical protein 2176 58.28 -1 2314436..2314864 - 142 114798316 - HNE_2214 - hypothetical protein 2177 61.79 0 2314889..2316220 - 443 114798445 - HNE_2215 - major facilitator family transporter 2178 62.62 0 2316492..2317430 + 312 114798660 - HNE_2216 - LysR family transcriptional regulator 2179 59.22 0 2317501..2318346 - 281 114798853 - HNE_2217 - fumarylacetoacetate hydrolase family protein 2180 55.56 -1 2318411..2319058 - 215 114799506 - HNE_2218 - putative biphenyl-2,3-diol 1,2-dioxygenase 2181 61.61 0 2319423..2320886 + 487 114799609 - HNE_2219 - aldehyde dehydrogenase family protein 2182 60.42 0 2321028..2321780 + 250 114800399 - HNE_2220 - class II aldolase/adducin domain-containing protein 2183 63.13 0 2321796..2322728 - 310 114800019 - HNE_2221 - short chain dehydrogenase/reductase family oxidoreductase 2184 58.84 0 2322946..2323839 - 297 114798404 - HNE_2222 - AraC family transcriptional regulator 2185 64.77 0 2324003..2325319 + 438 114799244 - HNE_2223 - major facilitator family transporter 2186 60.86 0 2325531..2326322 + 263 114800020 - HNE_2224 - MipA family protein 2187 60.39 0 2326743..2327714 - 323 114797195 - HNE_2225 - aldo/keto reductase family oxidoreductase 2188 64.17 0 2327850..2328731 + 293 114798010 - HNE_2226 - AraC family transcriptional regulator 2189 62.20 0 2328883..2329374 - 163 114797318 - HNE_2227 - hypothetical protein 2190 63.20 0 2329387..2330280 - 297 114798645 - HNE_2228 - NAD-dependent epimerase/dehydratase family protein 2191 65.56 0 2330384..2331193 + 269 114799172 - HNE_2229 - putative transcriptional regulator 2192 66.67 +1 2331874..2332653 - 259 114799955 cobA HNE_2230 - uroporphyrin-III C-methyltransferase 2193 62.87 0 2332650..2333861 - 403 114800210 - HNE_2231 - putative lipoprotein 2194 67.02 +1 2334064..2335206 - 380 114797910 - HNE_2232 - putative nitrate transporter 2195 64.12 0 2335203..2335949 - 248 114799661 nasT HNE_2233 - response regulator NasT 2196 62.99 0 2336181..2338652 + 823 114800413 nirB HNE_2234 - nitrite reductase [NAD(P)H], large subunit 2197 67.82 +1 2338649..2338996 + 115 114797238 nirD HNE_2235 - nitrite reductase [NAD(P)H], small subunit 2198 61.45 0 2339011..2339853 + 280 114797947 fnt HNE_2236 - formate/nitrite transporter 2199 67.94 +1 2339859..2341583 + 574 114798196 - HNE_2237 - carbohydrate kinase 2200 56.19 -1 2342080..2342184 - 34 114798183 - HNE_2239 - hypothetical protein 2201 65.09 0 2342174..2342869 - 231 114797199 - HNE_2240 - hypothetical protein 2202 66.60 +1 2342950..2344371 - 473 114800524 - HNE_2241 - putative chain length determinant protein 2203 62.87 0 2344554..2345501 + 315 114799572 - HNE_2242 - 2OG-Fe(II) oxygenase family oxidoreductase 2204 63.59 0 2345591..2346727 + 378 114797797 - HNE_2243 - aminotransferase 2205 62.84 0 2346810..2348351 - 513 114800349 pepA HNE_2244 - cytosol aminopeptidase 2206 62.09 0 2348467..2349099 - 210 114799358 - HNE_2245 - HAD family hydrolase 2207 64.04 0 2349106..2349903 - 265 114799032 thiG HNE_2246 - thiazole synthase 2208 63.85 0 2350028..2350240 - 70 114798481 thiS HNE_2247 - thiamine biosynthesis protein ThiS 2209 59.23 0 2350304..2350747 + 147 114797900 aroQ HNE_2248 - 3-dehydroquinate dehydratase 2210 62.21 0 2350750..2351220 + 156 114797700 accB HNE_2249 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 2211 62.08 0 2351222..2352595 + 457 114798573 accC HNE_2250 - acetyl-CoA carboxylase, biotin carboxylase 2212 62.03 0 2352653..2353429 + 258 114797414 aat HNE_2251 - leucyl/phenylalanyl-tRNA--protein transferase 2213 60.72 0 2353273..2353827 - 184 114799292 - HNE_2252 - hypothetical protein 2214 60.93 0 2353824..2354381 - 185 114797425 - HNE_2253 - hypothetical protein 2215 61.07 0 2354374..2354766 - 130 114798194 - HNE_2254 - putative NADH:ubiquinone oxidoreductase 2216 66.27 +1 2354987..2357239 + 750 114799028 - HNE_2255 - ribonucleoside reductase-like protein 2217 63.69 0 2357402..2358139 + 245 114799805 - HNE_2256 - pentapeptide repeat-containing protein 2218 62.95 0 2358217..2360046 - 609 114800235 aspS HNE_2257 - aspartyl-tRNA synthetase 2219 62.47 0 2360145..2361311 + 388 114797633 rnd HNE_2258 - ribonuclease D 2220 61.16 0 2361319..2362806 - 495 114800396 - HNE_2259 - Ppx/GppA family phosphatase 2221 59.09 0 2362803..2364980 - 725 114799243 ppk HNE_2260 - polyphosphate kinase 2222 64.48 0 2365009..2365740 - 243 114798512 - HNE_2261 - hypothetical protein 2223 66.27 +1 2365737..2366756 - 339 114800481 - HNE_2262 - hypothetical protein 2224 64.92 0 2366903..2367931 + 342 114798932 purM HNE_2263 - phosphoribosylformylglycinamidine cyclo-ligase 2225 65.64 0 2367928..2368512 + 194 114797986 purN HNE_2264 - phosphoribosylglycinamide formyltransferase 2226 64.13 0 2368620..2368934 + 104 114798803 - HNE_2265 - hypothetical protein 2227 62.60 0 2368931..2369962 + 343 114798815 - HNE_2266 - zinc-binding dehydrogenase family oxidoreductase 2228 60.33 0 2369969..2370394 - 141 114799837 - HNE_2267 - hypothetical protein 2229 58.91 0 2370394..2370741 - 115 114797737 - HNE_2268 - hypothetical protein 2230 61.70 0 2371007..2371429 - 140 114798716 ndk HNE_2269 - nucleoside diphosphate kinase 2231 63.10 0 2371581..2371916 + 111 114799351 - HNE_2270 - hypothetical protein 2232 55.19 -1 2372236..2372688 + 150 114797382 - HNE_2271 - acetyltransferase 2233 66.67 +1 2372760..2373230 - 156 114798143 - HNE_2272 - putative DNA polymerase III chi subunit 2234 65.17 0 2373332..2374798 - 488 114798964 - HNE_2273 - M17 family peptidase 2235 61.85 0 2374920..2376062 + 380 114799726 - HNE_2274 - putative permease 2236 62.66 0 2376062..2377183 + 373 114797396 - HNE_2275 - YjgP/YjgQ permease 2237 62.52 0 2377254..2379833 + 859 114799315 topA HNE_2276 - DNA topoisomerase I 2238 60.77 0 2379899..2380237 + 112 114797090 - HNE_2277 - hypothetical protein 2239 65.28 0 2380257..2380616 - 119 114798135 - HNE_2278 - hypothetical protein 2240 67.50 +1 2380303..2380662 + 119 114799106 - HNE_2279 - hypothetical protein 2241 64.92 0 2380722..2383016 + 764 114800052 rnr HNE_2280 - ribonuclease R 2242 67.22 +1 2383121..2383837 + 238 114797540 - HNE_2281 - NUDIX family hydrolase 2243 50.60 -2 2383994..2384161 + 55 114798587 rpmG HNE_2282 - 50S ribosomal protein L33 2244 65.04 0 2384225..2385451 - 408 114799591 - HNE_2283 - major facilitator transporter 2245 64.18 0 2385513..2386880 - 455 114798852 pleD HNE_2284 - response regulator PleD 2246 58.84 0 2386877..2387272 - 131 114799980 - HNE_2285 - cell division response regulator DivK 2247 63.69 0 2387408..2388682 + 424 114798874 - HNE_2286 - DNA polymerase IV 2248 65.80 +1 2388738..2389199 + 153 114798769 - HNE_2287 - putative endoribonuclease L-PSP 2249 66.80 +1 2389208..2389942 + 244 114797187 - HNE_2288 - glycerophosphoryl diester phosphodiesterase family protein 2250 62.62 0 2389954..2391114 + 386 114799871 - HNE_2289 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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