version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2078 62.25 0 2194360..2196531 - 723 114800097 katG HNE_2115 - catalase/peroxidase HPI 2079 60.05 0 2196948..2199380 + 810 114798931 - HNE_2116 - TonB-dependent receptor 2080 61.67 0 2199398..2200078 + 226 114798632 - HNE_2117 - 2OG-Fe(II) oxygenase family oxidoreductase 2081 67.30 +1 2200075..2201172 + 365 114797920 - HNE_2118 - FMN-dependent alpha-hydroxy acid dehydrogenase family protein 2082 64.58 0 2201169..2202269 - 366 114800199 - HNE_2119 - aryl-alcohol dehydrogenase 2083 58.45 0 2202382..2203026 - 214 114799254 - HNE_2120 - TetR family transcriptional regulator 2084 61.10 0 2203269..2205605 - 778 114800271 - HNE_2121 - outer membrane receptor (OMR) family protein 2085 59.75 0 2206157..2206315 + 52 114797887 - HNE_2122 - hypothetical protein 2086 65.16 0 2206312..2207241 - 309 114797991 - HNE_2123 - allophanate hydrolase, subunit 2 2087 65.24 0 2207246..2207875 - 209 114800075 - HNE_2124 - allophanate hydrolase, subunit 1 2088 66.67 +1 2207872..2208624 - 250 114797321 - HNE_2125 - LamB/YcsF family protein 2089 66.83 +1 2208621..2209835 - 404 114799474 - HNE_2126 - Mn2+/Fe2+ transporter 2090 65.18 0 2209832..2210842 - 336 114800249 - HNE_2127 - hypothetical protein 2091 60.51 0 2211196..2213763 + 855 114800361 - HNE_2128 - TonB-dependent receptor 2092 59.14 0 2213774..2215222 + 482 114797787 - HNE_2129 - hypothetical protein 2093 57.37 -1 2215286..2215963 + 225 114797656 - HNE_2130 - TetR family transcriptional regulator 2094 61.52 0 2216085..2216861 + 258 114798458 - HNE_2131 - IclR family transcriptional regulator 2095 55.76 -1 2216858..2217187 - 109 114799669 - HNE_2132 - hypothetical protein 2096 61.00 0 2217511..2218815 + 434 114799021 - HNE_2133 - mandelate racemase/muconate lactonizing enzyme family protein 2097 63.13 0 2218812..2219801 + 329 114797082 - HNE_2134 - aldo/keto reductase family oxidoreductase 2098 63.57 0 2219804..2220643 + 279 114798305 - HNE_2135 - amidohydrolase family protein 2099 63.96 0 2220645..2221382 + 245 114799043 - HNE_2136 - short chain dehydrogenase/reductase family oxidoreductase 2100 60.85 0 2221394..2222236 + 280 114800260 - HNE_2137 - fumarylacetoacetate hydrolase family protein 2101 61.81 0 2222440..2223036 + 198 114797731 - HNE_2138 - Ttg2 family toluene tolerance protein 2102 59.97 0 2223118..2223819 - 233 114798728 - HNE_2139 - hypothetical protein 2103 65.92 +1 2223824..2225575 - 583 114800018 - HNE_2140 - hypothetical protein 2104 64.38 0 2225572..2226270 - 232 114799219 - HNE_2141 - putative lipoprotein 2105 62.12 0 2226270..2228072 - 600 114799678 - HNE_2142 - Hep_Hag repeat-containing protein 2106 62.12 0 2228151..2228876 + 241 114799836 - HNE_2143 - ECF sigma factor family protein 2107 66.04 +1 2228827..2231238 - 803 114798457 - HNE_2144 - serine/threonine protein kinase 2108 63.15 0 2231426..2231965 + 179 114799644 - HNE_2145 - putative lipoprotein 2109 64.28 0 2231971..2234148 - 725 114798261 ptrB HNE_2146 - protease II 2110 66.67 +1 2234601..2235224 + 207 114797074 - HNE_2147 - hypothetical protein 2111 69.27 +1 2235221..2236336 + 371 114799220 dprA HNE_2148 - DNA protecting protein DprA 2112 61.10 0 2236584..2238794 + 736 114798255 - HNE_2149 - hypothetical protein 2113 61.94 0 2238936..2240183 + 415 114797858 - HNE_2150 - peptidyl-prolyl cis-trans isomerase domain-containing protein 2114 65.87 +1 2240235..2241242 + 335 114798861 pdxA HNE_2151 - 4-hydroxythreonine-4-phosphate dehydrogenase 2115 64.10 0 2241239..2242096 + 285 114799371 ksgA HNE_2152 - dimethyladenosine transferase 2116 61.01 0 2242093..2242746 - 217 114798626 - HNE_2153 - putative guanylate kinase 2117 62.71 0 2242736..2243620 - 294 114798477 - HNE_2154 - hypothetical protein 2118 57.90 -1 2243620..2244657 - 345 114800253 - HNE_2155 - hypothetical protein 2119 60.06 0 2244883..2246169 - 428 114798980 fabF HNE_2156 - 3-oxoacyl-[acyl-carrier-protein] synthase II 2120 52.99 -2 2246184..2246417 - 77 114798204 acpP3 HNE_2157 - acyl carrier protein 2121 58.67 0 2246530..2247267 - 245 114797161 fabG HNE_2158 - 3-oxoacyl-(acyl-carrier-protein) reductase 2122 52.20 -2 2247271..2247429 - 52 114799680 - HNE_2159 - hypothetical protein 2123 63.72 0 2247432..2248382 - 316 114799413 fabD HNE_2160 - malonyl CoA-acyl carrier protein transacylase 2124 57.23 -1 2248596..2248934 + 112 114800162 rpsF HNE_2161 - ribosomal protein S6 2125 54.26 -2 2248955..2249212 + 85 114797845 rpsR HNE_2162 - ribosomal protein S18 2126 61.37 0 2249225..2249809 + 194 114798663 rplI HNE_2163 - ribosomal protein L9 2127 61.03 0 2249981..2251471 + 496 114797768 dnaB HNE_2164 - replicative DNA helicase 2128 64.81 0 2251474..2251959 - 161 114798747 - HNE_2165 - CinA domain-containing protein 2129 60.73 0 2251987..2252895 - 302 114799733 - HNE_2166 - enoyl-CoA hydratase/isomerase family protein 2130 62.22 0 2253044..2254348 + 434 114797205 - HNE_2167 - amidohydrolase family protein 2131 60.51 0 2254361..2255350 + 329 114798176 - HNE_2168 - hypothetical protein 2132 66.47 +1 2255386..2256873 - 495 114799121 cobQ HNE_2169 - cobyric acid synthase CobQ 2133 61.90 0 2256971..2257369 - 132 114797365 - HNE_2170 - hypothetical protein 2134 52.90 -2 2257505..2257642 - 45 114798321 - HNE_2171 - hypothetical protein 2135 58.47 0 2257608..2257790 - 60 114800469 - HNE_2172 - hypothetical protein 2136 59.19 0 2257787..2258923 - 378 114799735 - HNE_2173 - PepSY-associated TM helix domain-containing protein 2137 61.67 0 2258935..2261115 - 726 114798388 - HNE_2174 - TonB-dependent receptor family protein 2138 58.20 -1 2262534..2264033 - 499 114797369 mmsA2 HNE_2176 - methylmalonate-semialdehyde dehydrogenase 2139 53.45 -2 2264088..2265698 - 536 114799711 - HNE_2177 - putative symporter YidK 2140 56.98 -1 2265873..2267390 + 505 114798724 - HNE_2178 - sulfatase family protein 2141 59.41 0 2267474..2268934 - 486 114800451 - HNE_2179 - putative lipoprotein 2142 56.13 -1 2269081..2271357 - 758 114799262 - HNE_2180 - outer membrane receptor (OMR) family protein 2143 56.68 -1 2271561..2272391 + 276 114798245 - HNE_2181 - SIS domain-containing protein 2144 58.41 -1 2272534..2274447 + 637 114797675 iolC HNE_2182 - kinase IolC 2145 58.86 0 2274466..2276310 + 614 114798854 iolD HNE_2183 - thiamine pyrophosphate-dependent enzyme IolD 2146 58.20 -1 2276323..2277231 + 302 114798293 iolE HNE_2184 - 2-keto-myo-inositol dehydratase 2147 59.80 0 2277224..2278024 + 266 114797478 iolB HNE_2185 - myo-inositol catabolism protein IolB 2148 57.69 -1 2278092..2279216 + 374 114799793 - HNE_2186 - oxidoreductase, NAD-binding 2149 63.65 0 2280613..2282400 + 595 114797632 - HNE_2187 - putative outer membrane efflux protein 2150 58.33 -1 2282460..2283143 + 227 114800395 - HNE_2188 - DNA-binding heavy metal response regulator 2151 62.02 0 2283140..2284495 + 451 114798801 - HNE_2189 - heavy metal sensor histidine kinase 2152 62.01 0 2284598..2287774 - 1058 114797722 - HNE_2190 - AcrB/AcrD/AcrF family protein 2153 66.30 +1 2287828..2288928 - 366 114797259 - HNE_2191 - RND family efflux transporter MFP subunit 2154 63.61 0 2289126..2290040 - 304 114799757 - HNE_2192 - short chain dehydrogenase/reductase family oxidoreductase 2155 58.28 -1 2290265..2290729 + 154 114800040 - HNE_2193 - MarR family transcriptional regulator 2156 62.38 0 2290726..2291541 + 271 114798483 - HNE_2194 - hypothetical protein 2157 60.63 0 2291562..2292008 - 148 114797925 - HNE_2195 - DoxX family protein 2158 63.56 0 2292141..2293235 - 364 114799498 - HNE_2196 - short chain dehydrogenase/reductase family oxidoreductase 2159 67.39 +1 2293336..2294025 - 229 114798698 - HNE_2197 - hypothetical protein 2160 59.92 0 2294035..2294508 - 157 114799027 - HNE_2198 - hypothetical protein 2161 61.58 0 2294646..2295569 - 307 114799755 - HNE_2199 - AraC family transcriptional regulator 2162 59.69 0 2296179..2296637 + 152 114800410 - HNE_2200 - putative isoquinoline 1-oxidoreductase, alpha subunit 2163 64.59 0 2296615..2297337 + 240 114797647 - HNE_2201 - hypothetical protein 2164 62.21 0 2297397..2299526 + 709 114797470 - HNE_2202 - putative isoquinoline 1-oxidoreductase, beta subunit 2165 58.55 0 2299572..2300150 - 192 114798163 - HNE_2203 - sulfatase domain-containing protein 2166 60.23 0 2300264..2301304 - 346 114798933 - HNE_2204 - aldo/keto reductase family oxidoreductase 2167 64.85 0 2301362..2302186 - 274 114799710 - HNE_2205 - short chain dehydrogenase/reductase family oxidoreductase 2168 63.41 0 2302532..2303299 + 255 114797204 - HNE_2206 - GntR family transcriptional regulator 2169 58.49 0 2303327..2304622 - 431 114798191 - HNE_2207 - cytochrome P450 family protein 2170 62.08 0 2304653..2306332 - 559 114799635 - HNE_2208 - hypothetical protein 2171 63.66 0 2306592..2307290 - 232 114800415 - HNE_2209 - TetR family transcriptional regulator 2172 59.35 0 2307522..2309858 + 778 114797247 - HNE_2210 - outer membrane receptor (OMR) family protein 2173 61.23 0 2309894..2311567 + 557 114798044 - HNE_2211 - sulfatase family protein 2174 61.54 0 2311633..2312724 + 363 114800456 - HNE_2212 - hypothetical protein 2175 65.71 0 2312775..2314349 - 524 114797649 - HNE_2213 - hypothetical protein 2176 58.28 -1 2314436..2314864 - 142 114798316 - HNE_2214 - hypothetical protein 2177 61.79 0 2314889..2316220 - 443 114798445 - HNE_2215 - major facilitator family transporter 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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