version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2026 61.82 0 2135435..2136652 - 405 114797766 hemA HNE_2062 - 5-aminolevulinate synthase 2027 61.99 0 2136749..2137540 - 263 114799874 - HNE_2063 - hypothetical protein 2028 64.32 0 2137753..2138520 + 255 114797751 ppnK HNE_2064 - ATP-NAD kinase 2029 63.45 0 2138600..2139220 + 206 114798002 - HNE_2065 - hypothetical protein 2030 62.58 0 2139217..2140023 - 268 114799236 - HNE_2066 - NUDIX family hydrolase 2031 64.01 0 2140138..2140815 + 225 114799143 - HNE_2067 - hypothetical protein 2032 64.95 0 2140812..2141975 - 387 114800125 - HNE_2068 - hypothetical protein 2033 60.61 0 2142130..2143467 - 445 114797334 tig HNE_2069 - trigger factor 2034 61.37 0 2144027..2145481 + 484 114798555 - HNE_2070 - hypothetical protein 2035 61.15 0 2145478..2145876 + 132 114798772 - HNE_2071 - hypothetical protein 2036 58.78 0 2146064..2147533 + 489 114799530 algI HNE_2072 - alginate biosynthesis protein AlgI 2037 58.56 0 2147496..2148593 + 365 114798963 - HNE_2073 - hypothetical protein 2038 55.69 -1 2148615..2148860 + 81 114799754 acpP2 HNE_2074 - acyl carrier protein 2039 62.66 0 2148908..2150155 + 415 114797975 - HNE_2075 - AMP-binding domain-containing protein 2040 60.98 0 2150188..2150925 + 245 114798063 - HNE_2076 - short chain dehydrogenase/reductase family oxidoreductase 2041 61.51 0 2150926..2152224 - 432 114800405 - HNE_2077 - hypothetical protein 2042 59.37 0 2152624..2153130 + 168 114797560 - HNE_2079 - acetyltransferase 2043 65.42 0 2153133..2154575 - 480 114799199 - HNE_2080 - carbohydrate kinase family protein 2044 63.89 0 2154583..2155122 - 179 114799998 - HNE_2081 - phosphoglycerate mutase family protein 2045 60.25 0 2155119..2155928 - 269 114797257 - HNE_2082 - hypothetical protein 2046 55.16 -1 2156180..2156518 + 112 114797943 glnB HNE_2083 - nitrogen regulatory protein P-II 2047 59.54 0 2156598..2158001 + 467 114800384 glnA HNE_2084 - glutamine synthetase, type I 2048 61.15 0 2158088..2159011 + 307 114797373 - HNE_2085 - Ser/Thr protein phosphatase family protein 2049 60.02 0 2159071..2160333 - 420 114799276 clpX HNE_2086 - ATP-dependent protease ATP-binding subunit 2050 56.25 -1 2160460..2161083 - 207 114800297 clpP HNE_2087 - ATP-dependent Clp protease, proteolytic subunit ClpP 2051 62.86 0 2161202..2162095 - 297 114799820 - HNE_2088 - hypothetical protein 2052 63.69 0 2162105..2163211 - 368 114797324 - HNE_2089 - hypothetical protein 2053 59.93 0 2163407..2165143 + 578 114800269 - HNE_2090 - M28 family peptidase 2054 61.85 0 2165194..2165982 + 262 114797809 - HNE_2091 - hypothetical protein 2055 61.63 0 2165979..2166911 - 310 114797562 - HNE_2092 - glycosyl transferase, group 2 family protein 2056 60.95 0 2167109..2168263 - 384 114798530 - HNE_2093 - acyl-CoA dehydrogenase 2057 59.72 0 2168293..2169486 - 397 114799055 - HNE_2094 - acyl-CoA dehydrogenase family protein 2058 65.86 +1 2169615..2170610 - 331 114800060 - HNE_2095 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2059 56.57 -1 2170750..2170947 + 65 114799806 - HNE_2096 - hypothetical protein 2060 62.06 0 2170953..2171495 + 180 114798307 - HNE_2097 - hypothetical protein 2061 63.93 0 2171482..2172906 - 474 114800553 pyk HNE_2098 - pyruvate kinase 2062 60.97 0 2173180..2174916 + 578 114797194 - HNE_2099 - putative diguanylate cyclase 2063 60.42 0 2174913..2177555 - 880 114799087 - HNE_2100 - putative methionine synthase 2064 63.77 0 2177552..2177965 - 137 114800042 - HNE_2101 - hypothetical protein 2065 61.00 0 2177977..2179035 - 352 114797600 - HNE_2102 - putative metionine synthase, homocysteine S-methyltransferase subunit 2066 64.37 0 2179039..2179953 - 304 114798390 metF HNE_2103 - 5,10-methylenetetrahydrofolate reductase 2067 64.21 0 2179950..2180927 - 325 114799579 - HNE_2104 - ArsR family transcriptional regulator 2068 58.46 0 2181226..2181993 + 255 114797269 - HNE_2105 - putative lipoprotein VacJ 2069 56.94 -1 2182025..2182651 + 208 114798048 - HNE_2106 - Ttg2 family toluene tolerance protein 2070 63.29 0 2182712..2184340 - 542 114799248 - HNE_2107 - p-aminobenzoyl-glutamate transporter (AbgT) family, permease protein 2071 69.47 +2 2184688..2185614 + 308 114799944 - HNE_2108 - ISHne4, transposase 2072 60.52 0 2185717..2186220 - 167 114798907 - HNE_2109 - hypothetical protein 2073 67.74 +1 2186411..2187814 - 467 114800422 - HNE_2110 - RND efflux system outer membrane lipoprotein 2074 63.48 0 2187811..2191011 - 1066 114799636 - HNE_2111 - hydrophobe/amphiphile efflux-1 family protein 2075 65.24 0 2191076..2192266 - 396 114800257 - HNE_2112 - RND family efflux transporter MFP subunit 2076 60.91 0 2192402..2192974 + 190 114797422 - HNE_2113 - TetR family transcriptional regulator 2077 63.94 0 2193080..2194291 + 403 114797055 - HNE_2114 - hypothetical protein 2078 62.25 0 2194360..2196531 - 723 114800097 katG HNE_2115 - catalase/peroxidase HPI 2079 60.05 0 2196948..2199380 + 810 114798931 - HNE_2116 - TonB-dependent receptor 2080 61.67 0 2199398..2200078 + 226 114798632 - HNE_2117 - 2OG-Fe(II) oxygenase family oxidoreductase 2081 67.30 +1 2200075..2201172 + 365 114797920 - HNE_2118 - FMN-dependent alpha-hydroxy acid dehydrogenase family protein 2082 64.58 0 2201169..2202269 - 366 114800199 - HNE_2119 - aryl-alcohol dehydrogenase 2083 58.45 0 2202382..2203026 - 214 114799254 - HNE_2120 - TetR family transcriptional regulator 2084 61.10 0 2203269..2205605 - 778 114800271 - HNE_2121 - outer membrane receptor (OMR) family protein 2085 59.75 0 2206157..2206315 + 52 114797887 - HNE_2122 - hypothetical protein 2086 65.16 0 2206312..2207241 - 309 114797991 - HNE_2123 - allophanate hydrolase, subunit 2 2087 65.24 0 2207246..2207875 - 209 114800075 - HNE_2124 - allophanate hydrolase, subunit 1 2088 66.67 +1 2207872..2208624 - 250 114797321 - HNE_2125 - LamB/YcsF family protein 2089 66.83 +1 2208621..2209835 - 404 114799474 - HNE_2126 - Mn2+/Fe2+ transporter 2090 65.18 0 2209832..2210842 - 336 114800249 - HNE_2127 - hypothetical protein 2091 60.51 0 2211196..2213763 + 855 114800361 - HNE_2128 - TonB-dependent receptor 2092 59.14 0 2213774..2215222 + 482 114797787 - HNE_2129 - hypothetical protein 2093 57.37 -1 2215286..2215963 + 225 114797656 - HNE_2130 - TetR family transcriptional regulator 2094 61.52 0 2216085..2216861 + 258 114798458 - HNE_2131 - IclR family transcriptional regulator 2095 55.76 -1 2216858..2217187 - 109 114799669 - HNE_2132 - hypothetical protein 2096 61.00 0 2217511..2218815 + 434 114799021 - HNE_2133 - mandelate racemase/muconate lactonizing enzyme family protein 2097 63.13 0 2218812..2219801 + 329 114797082 - HNE_2134 - aldo/keto reductase family oxidoreductase 2098 63.57 0 2219804..2220643 + 279 114798305 - HNE_2135 - amidohydrolase family protein 2099 63.96 0 2220645..2221382 + 245 114799043 - HNE_2136 - short chain dehydrogenase/reductase family oxidoreductase 2100 60.85 0 2221394..2222236 + 280 114800260 - HNE_2137 - fumarylacetoacetate hydrolase family protein 2101 61.81 0 2222440..2223036 + 198 114797731 - HNE_2138 - Ttg2 family toluene tolerance protein 2102 59.97 0 2223118..2223819 - 233 114798728 - HNE_2139 - hypothetical protein 2103 65.92 +1 2223824..2225575 - 583 114800018 - HNE_2140 - hypothetical protein 2104 64.38 0 2225572..2226270 - 232 114799219 - HNE_2141 - putative lipoprotein 2105 62.12 0 2226270..2228072 - 600 114799678 - HNE_2142 - Hep_Hag repeat-containing protein 2106 62.12 0 2228151..2228876 + 241 114799836 - HNE_2143 - ECF sigma factor family protein 2107 66.04 +1 2228827..2231238 - 803 114798457 - HNE_2144 - serine/threonine protein kinase 2108 63.15 0 2231426..2231965 + 179 114799644 - HNE_2145 - putative lipoprotein 2109 64.28 0 2231971..2234148 - 725 114798261 ptrB HNE_2146 - protease II 2110 66.67 +1 2234601..2235224 + 207 114797074 - HNE_2147 - hypothetical protein 2111 69.27 +1 2235221..2236336 + 371 114799220 dprA HNE_2148 - DNA protecting protein DprA 2112 61.10 0 2236584..2238794 + 736 114798255 - HNE_2149 - hypothetical protein 2113 61.94 0 2238936..2240183 + 415 114797858 - HNE_2150 - peptidyl-prolyl cis-trans isomerase domain-containing protein 2114 65.87 +1 2240235..2241242 + 335 114798861 pdxA HNE_2151 - 4-hydroxythreonine-4-phosphate dehydrogenase 2115 64.10 0 2241239..2242096 + 285 114799371 ksgA HNE_2152 - dimethyladenosine transferase 2116 61.01 0 2242093..2242746 - 217 114798626 - HNE_2153 - putative guanylate kinase 2117 62.71 0 2242736..2243620 - 294 114798477 - HNE_2154 - hypothetical protein 2118 57.90 -1 2243620..2244657 - 345 114800253 - HNE_2155 - hypothetical protein 2119 60.06 0 2244883..2246169 - 428 114798980 fabF HNE_2156 - 3-oxoacyl-[acyl-carrier-protein] synthase II 2120 52.99 -2 2246184..2246417 - 77 114798204 acpP3 HNE_2157 - acyl carrier protein 2121 58.67 0 2246530..2247267 - 245 114797161 fabG HNE_2158 - 3-oxoacyl-(acyl-carrier-protein) reductase 2122 52.20 -2 2247271..2247429 - 52 114799680 - HNE_2159 - hypothetical protein 2123 63.72 0 2247432..2248382 - 316 114799413 fabD HNE_2160 - malonyl CoA-acyl carrier protein transacylase 2124 57.23 -1 2248596..2248934 + 112 114800162 rpsF HNE_2161 - ribosomal protein S6 2125 54.26 -2 2248955..2249212 + 85 114797845 rpsR HNE_2162 - ribosomal protein S18 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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