version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1967 63.30 0 2077049..2077939 - 296 114798431 - HNE_2002 - senescence marker protein-30 family protein 1968 62.20 0 2077976..2078848 - 290 114798359 - HNE_2003 - putative 2-dehydro-3-deoxygalactonokinase 1969 65.34 0 2079003..2079830 + 275 114800510 - HNE_2004 - MazG family protein 1970 64.94 0 2079844..2081172 - 442 114799526 - HNE_2005 - putative GTP-binding protein HflX 1971 57.83 -1 2081180..2081428 - 82 114797999 hfq HNE_2006 - RNA-binding protein Hfq 1972 62.47 0 2081505..2082911 - 468 114797385 - HNE_2007 - putative potassium uptake protein TrkH 1973 62.74 0 2082915..2084288 - 457 114799538 trkA HNE_2008 - potassium transporter peripheral membrane component 1974 63.35 0 2084313..2085698 - 461 114799003 ntrX HNE_2009 - sigma-54 dependent DNA-binding response regulator 1975 62.85 0 2085712..2087991 - 759 114800247 ntrY HNE_2010 - nitrogen regulation protein NtrY 1976 64.77 0 2088097..2089470 - 457 114799444 glnG HNE_2011 - nitrogen regulation protein NR(I) 1977 66.38 +1 2089476..2090534 - 352 114800221 glnL HNE_2012 - nitrogen regulation protein NR(II) 1978 65.61 0 2090531..2091568 - 345 114799466 - HNE_2013 - putative tRNA-dihydrouridine synthase 1979 65.00 0 2091646..2092782 + 378 114798198 ispDF HNE_2014 - IspD/IspF bifunctional enzyme 1980 56.73 -1 2092862..2093032 + 56 114797375 - HNE_2015 - hypothetical protein 1981 65.52 0 2093046..2093831 + 261 114797752 - HNE_2016 - enoyl-CoA hydratase/isomerase family protein 1982 66.67 +1 2093883..2094344 + 153 114798844 - HNE_2017 - CinA domain-containing protein 1983 64.97 0 2094601..2095776 + 391 114798090 - HNE_2018 - ISHne2, transposase 1984 61.18 0 2096078..2096332 - 84 114798642 - HNE_2019 - hypothetical protein 1985 62.12 0 2096534..2096995 - 153 114799654 - HNE_2020 - cyclase/dehydrase family protein 1986 63.64 0 2096999..2098054 - 351 114800398 lipA HNE_2021 - lipoyl synthase 1987 62.82 0 2098134..2099720 + 528 114797277 aas HNE_2022 - 2-acylglycerophosphoethanolamine acyltransferase/Acyl-[acyl-carrier-protein] synthetase 1988 63.82 0 2099728..2100570 - 280 114798279 phaB HNE_2023 - poly(3-hydroxyalkanoate) depolymerase 1989 59.15 0 2100593..2102281 - 562 114798910 - HNE_2024 - PHA-synthase 2 1990 57.19 -1 2102441..2103073 + 210 114799904 phaD HNE_2025 - transcriptional regulator PhaD 1991 61.11 0 2104100..2104801 + 233 114797860 - HNE_2027 - dienelactone hydrolase family protein 1992 63.32 0 2104884..2105570 - 228 114798462 phoB HNE_2028 - phosphate regulon transcriptional regulatory protein PhoB 1993 59.83 0 2105602..2106288 - 228 114799041 phoU HNE_2029 - phosphate transport system regulatory protein PhoU 1994 62.80 0 2106300..2107127 - 275 114799554 pstB HNE_2030 - phosphate ABC transporter, ATP-binding protein 1995 64.45 0 2107127..2108704 - 525 114799902 pstA HNE_2031 - phosphate ABC transporter, permease protein PtsA 1996 64.62 0 2108697..2110112 - 471 114797381 pstC HNE_2032 - phosphate ABC transporter, permease protein 1997 61.11 0 2110242..2110799 + 185 114798299 hslV HNE_2033 - ATP-dependent protease peptidase subunit 1998 63.30 0 2110902..2112206 + 434 114800330 hslU HNE_2034 - ATP-dependent protease ATP-binding subunit 1999 56.86 -1 2112217..2112675 - 152 114797758 - HNE_2035 - hypothetical protein 2000 62.46 0 2112629..2113627 - 332 114798791 - HNE_2036 - PfkB family kinase 2001 63.59 0 2113775..2114653 + 292 114798888 - HNE_2037 - hypothetical protein 2002 63.79 0 2114650..2114997 - 115 114799858 - HNE_2038 - putative lipoprotein 2003 63.29 0 2115011..2116699 - 562 114797353 - HNE_2039 - peptidase family protein 2004 63.92 0 2116762..2117526 - 254 114798206 nth HNE_2040 - endonuclease III 2005 63.60 0 2117572..2118060 + 162 114797443 - HNE_2041 - hypothetical protein 2006 59.47 0 2118227..2119504 + 425 114799772 - HNE_2042 - cytochrome P450 family protein 2007 62.95 0 2119569..2120240 + 223 114799004 - HNE_2043 - nitroreductase family protein 2008 62.23 0 2120290..2120898 + 202 114799719 - HNE_2044 - hypothetical protein 2009 63.40 0 2120908..2121612 - 234 114798961 - HNE_2045 - putative 4'-phosphopantetheinyl transferase 2010 61.37 0 2121640..2122659 - 339 114798683 scpB HNE_2046 - segregation and condensation protein B 2011 64.39 0 2122646..2123479 - 277 114797903 scpA HNE_2047 - segregation and condensation protein A 2012 64.15 0 2123476..2124510 - 344 114797421 nagZ HNE_2048 - beta-hexosaminidase 2013 64.20 0 2124514..2125323 - 269 114799450 - HNE_2049 - sporulation repeat-containing protein 2014 62.40 0 2125427..2126599 - 390 114797343 - HNE_2050 - putative deoxyguanosinetriphosphate triphosphohydrolase 2015 57.89 -1 2126627..2126968 + 113 114799698 - HNE_2051 - iron-sulfur cluster assembly accessory protein 2016 62.48 0 2127283..2128452 + 389 114798159 - HNE_2052 - epoxide hydrolase 2017 54.06 -2 2128568..2129392 + 274 114797350 - HNE_2053 - hypothetical protein 2018 63.66 0 2129624..2130088 - 154 114800202 nusB HNE_2054 - transcription antitermination factor NusB 2019 61.77 0 2130088..2130516 - 142 114799272 ribH HNE_2055 - 6,7-dimethyl-8-ribityllumazine synthase 2020 63.39 0 2130518..2131645 - 375 114799819 ribAB HNE_2056 - riboflavin biosynthesis protein RibA 2021 63.61 0 2131649..2132269 - 206 114798806 ribE HNE_2057 - riboflavin synthase subunit alpha 2022 68.81 +1 2132288..2132941 - 217 114798296 - HNE_2058 - riboflavin biosynthesis protein RibD domain-containing protein 2023 61.04 0 2132938..2133417 - 159 114797364 nrdR HNE_2059 - NrdR family transcriptional regulator 2024 64.60 0 2133424..2134731 - 435 114799314 glyA HNE_2060 - serine hydroxymethyl transferase 2025 54.58 -2 2134770..2135348 + 192 114800329 - HNE_2061 - transcriptional regulator 2026 61.82 0 2135435..2136652 - 405 114797766 hemA HNE_2062 - 5-aminolevulinate synthase 2027 61.99 0 2136749..2137540 - 263 114799874 - HNE_2063 - hypothetical protein 2028 64.32 0 2137753..2138520 + 255 114797751 ppnK HNE_2064 - ATP-NAD kinase 2029 63.45 0 2138600..2139220 + 206 114798002 - HNE_2065 - hypothetical protein 2030 62.58 0 2139217..2140023 - 268 114799236 - HNE_2066 - NUDIX family hydrolase 2031 64.01 0 2140138..2140815 + 225 114799143 - HNE_2067 - hypothetical protein 2032 64.95 0 2140812..2141975 - 387 114800125 - HNE_2068 - hypothetical protein 2033 60.61 0 2142130..2143467 - 445 114797334 tig HNE_2069 - trigger factor 2034 61.37 0 2144027..2145481 + 484 114798555 - HNE_2070 - hypothetical protein 2035 61.15 0 2145478..2145876 + 132 114798772 - HNE_2071 - hypothetical protein 2036 58.78 0 2146064..2147533 + 489 114799530 algI HNE_2072 - alginate biosynthesis protein AlgI 2037 58.56 0 2147496..2148593 + 365 114798963 - HNE_2073 - hypothetical protein 2038 55.69 -1 2148615..2148860 + 81 114799754 acpP2 HNE_2074 - acyl carrier protein 2039 62.66 0 2148908..2150155 + 415 114797975 - HNE_2075 - AMP-binding domain-containing protein 2040 60.98 0 2150188..2150925 + 245 114798063 - HNE_2076 - short chain dehydrogenase/reductase family oxidoreductase 2041 61.51 0 2150926..2152224 - 432 114800405 - HNE_2077 - hypothetical protein 2042 59.37 0 2152624..2153130 + 168 114797560 - HNE_2079 - acetyltransferase 2043 65.42 0 2153133..2154575 - 480 114799199 - HNE_2080 - carbohydrate kinase family protein 2044 63.89 0 2154583..2155122 - 179 114799998 - HNE_2081 - phosphoglycerate mutase family protein 2045 60.25 0 2155119..2155928 - 269 114797257 - HNE_2082 - hypothetical protein 2046 55.16 -1 2156180..2156518 + 112 114797943 glnB HNE_2083 - nitrogen regulatory protein P-II 2047 59.54 0 2156598..2158001 + 467 114800384 glnA HNE_2084 - glutamine synthetase, type I 2048 61.15 0 2158088..2159011 + 307 114797373 - HNE_2085 - Ser/Thr protein phosphatase family protein 2049 60.02 0 2159071..2160333 - 420 114799276 clpX HNE_2086 - ATP-dependent protease ATP-binding subunit 2050 56.25 -1 2160460..2161083 - 207 114800297 clpP HNE_2087 - ATP-dependent Clp protease, proteolytic subunit ClpP 2051 62.86 0 2161202..2162095 - 297 114799820 - HNE_2088 - hypothetical protein 2052 63.69 0 2162105..2163211 - 368 114797324 - HNE_2089 - hypothetical protein 2053 59.93 0 2163407..2165143 + 578 114800269 - HNE_2090 - M28 family peptidase 2054 61.85 0 2165194..2165982 + 262 114797809 - HNE_2091 - hypothetical protein 2055 61.63 0 2165979..2166911 - 310 114797562 - HNE_2092 - glycosyl transferase, group 2 family protein 2056 60.95 0 2167109..2168263 - 384 114798530 - HNE_2093 - acyl-CoA dehydrogenase 2057 59.72 0 2168293..2169486 - 397 114799055 - HNE_2094 - acyl-CoA dehydrogenase family protein 2058 65.86 +1 2169615..2170610 - 331 114800060 - HNE_2095 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2059 56.57 -1 2170750..2170947 + 65 114799806 - HNE_2096 - hypothetical protein 2060 62.06 0 2170953..2171495 + 180 114798307 - HNE_2097 - hypothetical protein 2061 63.93 0 2171482..2172906 - 474 114800553 pyk HNE_2098 - pyruvate kinase 2062 60.97 0 2173180..2174916 + 578 114797194 - HNE_2099 - putative diguanylate cyclase 2063 60.42 0 2174913..2177555 - 880 114799087 - HNE_2100 - putative methionine synthase 2064 63.77 0 2177552..2177965 - 137 114800042 - HNE_2101 - hypothetical protein 2065 61.00 0 2177977..2179035 - 352 114797600 - HNE_2102 - putative metionine synthase, homocysteine S-methyltransferase subunit 2066 64.37 0 2179039..2179953 - 304 114798390 metF HNE_2103 - 5,10-methylenetetrahydrofolate reductase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0