version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1838 59.58 0 1936799..1937419 + 206 114799191 gspJ HNE_1871 - general secretion pathway protein J 1839 61.01 0 1937416..1938387 + 323 114798322 gspK HNE_1872 - general secretion pathway protein K 1840 57.52 -1 1938387..1939490 + 367 114800477 gspL HNE_1873 - general secretion pathway protein L 1841 58.74 0 1939487..1939978 + 163 114799513 gspM HNE_1874 - general secretion pathway protein M 1842 57.94 -1 1939978..1940733 + 251 114798558 gspN HNE_1875 - general secretion pathway protein N 1843 59.30 0 1940730..1941218 + 162 114797558 - HNE_1876 - hypothetical protein 1844 58.91 0 1941247..1941594 - 115 114800058 - HNE_1877 - DNA-binding protein 1845 59.55 0 1941686..1943062 - 458 114798834 sdaA HNE_1878 - L-serine ammonia-lyase 1846 64.14 0 1943135..1944322 - 395 114799387 - HNE_1879 - monooxygenase 1847 55.39 -1 1944356..1944559 - 67 114800346 - HNE_1880 - hypothetical protein 1848 58.07 -1 1944678..1945619 + 313 114797217 - HNE_1881 - ABC transporter, ATP-binding protein 1849 56.70 -1 1945641..1945961 - 106 114798336 trx HNE_1882 - thioredoxin 1850 64.21 0 1946026..1949532 - 1168 114799862 addA HNE_1883 - double-strand break repair helicase AddA 1851 65.19 0 1949525..1952578 - 1017 114800509 - HNE_1884 - hypothetical protein 1852 65.70 0 1952568..1953293 - 241 114797511 - HNE_1885 - nucleotidyl transferase family protein 1853 62.85 0 1953290..1954390 - 366 114798471 - HNE_1886 - hypothetical protein 1854 59.21 0 1954374..1954829 - 151 114798401 - HNE_1887 - hypothetical protein 1855 61.93 0 1954986..1956230 + 414 114799596 - HNE_1888 - pyridine nucleotide-disulfide oxidoreductase 1856 57.94 -1 1956248..1956568 + 106 114800377 fdxB HNE_1889 - ferredoxin, 2Fe-2S 1857 60.94 0 1956703..1957488 + 261 114798894 - HNE_1890 - hypothetical protein 1858 58.58 0 1957560..1957967 - 135 114798087 atpC HNE_1891 - ATP synthase F1, epsilon subunit 1859 60.01 0 1957979..1959406 - 475 114800518 atpD HNE_1892 - F0F1 ATP synthase subunit beta 1860 59.73 0 1959453..1960331 - 292 114800497 atpG HNE_1893 - ATP synthase F1, gamma subunit 1861 59.38 0 1960367..1961902 - 511 114799519 atpA HNE_1894 - ATP synthase F1, alpha subunit 1862 57.88 -1 1961911..1962456 - 181 114798041 atpH HNE_1895 - ATP synthase F1, delta subunit 1863 65.26 0 1962664..1964862 - 732 114797126 priA HNE_1896 - primosome assembly protein PriA 1864 65.46 0 1964922..1965500 - 192 114800225 - HNE_1897 - TetR family transcriptional regulator 1865 62.38 0 1965589..1966008 + 139 114799649 - HNE_1898 - thioesterase family protein 1866 60.02 0 1966085..1967077 + 330 114798057 - HNE_1899 - AAA family ATPase 1867 62.33 0 1967090..1968451 + 453 114798981 - HNE_1900 - VWA domain-containing protein 1868 61.31 0 1968462..1969544 - 360 114798609 ccrM HNE_1901 - modification methylase CcrM 1869 63.42 0 1969737..1971368 + 543 114797816 - HNE_1902 - Na/Pi cotransporter family protein 1870 62.01 0 1971365..1972438 - 357 114798617 - HNE_1903 - radical SAM domain-containing protein 1871 65.37 0 1972547..1973164 - 205 114797555 - HNE_1904 - hypothetical protein 1872 60.84 0 1973272..1973769 + 165 114800292 - HNE_1905 - hypothetical protein 1873 65.94 +1 1973766..1974449 - 227 114799335 - HNE_1906 - glycosyl transferase, group 2 family protein 1874 54.30 -2 1974535..1975011 + 158 114799154 - HNE_1907 - hypothetical protein 1875 65.32 0 1975012..1975752 - 246 114798144 - HNE_1908 - uracil-DNA glycosylase 1876 61.73 0 1975898..1977577 + 559 114797800 - HNE_1909 - putative electron transfer flavoprotein-ubiquinone oxidoreductase 1877 61.96 0 1977715..1979649 + 644 114799202 - HNE_1910 - putative lipoprotein 1878 63.79 0 1979762..1982368 + 868 114797913 mrcA HNE_1911 - penicillin-binding protein 1A 1879 61.19 0 1982462..1983569 + 368 114798643 prfB HNE_1912 - peptide chain release factor 2, programmed frameshift 1880 60.31 0 1983566..1984210 + 214 114798604 - HNE_1913 - cold shock DNA-binding membrane protein 1881 65.13 0 1984197..1985240 - 347 114799676 mutY HNE_1914 - A/G-specific adenine glycosylase 1882 65.55 0 1985286..1985822 + 178 114799887 - HNE_1915 - hypothetical protein 1883 61.46 0 1985893..1986564 + 223 114798923 - HNE_1916 - DSBA-like thioredoxin domain-containing protein 1884 69.27 +1 1986580..1990041 + 1153 114799181 smc HNE_1917 - chromosome segregation protein SMC 1885 59.50 0 1990191..1990553 + 120 114798123 - HNE_1918 - putative ATP synthase, subunit I 1886 60.37 0 1990559..1991320 + 253 114797617 atpB HNE_1919 - F0F1 ATP synthase subunit A 1887 59.92 0 1991437..1991673 + 78 114798825 atpE HNE_1920 - ATP synthase F0, C subunit 1888 61.67 0 1991719..1992258 + 179 114798353 - HNE_1921 - ATP synthase F0, B subunit family protein 1889 67.19 +1 1992258..1992827 + 189 114798056 - HNE_1922 - ATP synthase F0, B subunit family protein 1890 60.55 0 1992958..1993872 - 304 114797116 - HNE_1923 - hypothetical protein 1891 60.93 0 1994021..1995118 + 365 114799588 - HNE_1924 - translation-associated GTPase 1892 58.59 0 1995200..1996189 - 329 114798600 secF HNE_1925 - protein-export membrane protein SecF 1893 60.88 0 1996208..1997815 - 535 114798563 secD1 HNE_1926 - protein-export membrane protein SecD 1894 61.33 0 1997852..1998226 - 124 114797763 yajC HNE_1927 - preprotein translocase, YajC subunit 1895 66.06 +1 1998332..1998991 - 219 114800134 pcm HNE_1928 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 1896 62.47 0 1998979..1999740 - 253 114799382 surE HNE_1929 - stationary phase survival protein SurE 1897 61.74 0 1999780..2001078 - 432 114800440 serS HNE_1930 - seryl-tRNA synthetase 1898 61.26 0 2001470..2001580 + 36 114797679 - HNE_1931 - hypothetical protein 1899 58.21 -1 2002420..2003247 - 275 114798916 tatC HNE_1932 - Sec-independent protein translocase TatC 1900 63.12 0 2003244..2003666 - 140 114799670 tatA1 HNE_1933 - twin-arginine translocation protein TatA 1901 57.75 -1 2003692..2003904 - 70 114797323 tatA2 HNE_1934 - twin arginine-targeting protein translocase 1902 60.23 0 2003988..2004764 + 258 114798068 xth HNE_1935 - exodeoxyribonuclease III 1903 56.43 -1 2004790..2005131 + 113 114799389 - HNE_1936 - hypothetical protein 1904 63.08 0 2005489..2006157 + 222 114800222 purQ HNE_1937 - phosphoribosylformylglycinamidine synthase I 1905 58.97 0 2006154..2007167 + 337 114797828 add HNE_1938 - adenosine deaminase 1906 61.90 0 2007195..2007866 - 223 114798576 - HNE_1939 - hypothetical protein 1907 64.11 0 2007981..2009114 - 377 114797607 - HNE_1940 - oxidoreductase, FAD-binding 1908 62.70 0 2009156..2010769 + 537 114798369 - HNE_1941 - TPR/sulfotransferase domain-containing protein 1909 62.47 0 2010803..2013064 + 753 114797329 purL HNE_1942 - phosphoribosylformylglycinamidine synthase II 1910 54.13 -2 2013144..2013749 - 201 114797966 - HNE_1943 - OmpA family protein 1911 58.87 0 2014008..2014520 - 170 114799685 - HNE_1944 - hypothetical protein 1912 65.19 0 2014517..2015533 - 338 114800468 - HNE_1945 - M20/M25/M40 family peptidase 1913 63.25 0 2015648..2015881 + 77 114799421 - HNE_1946 - BolA/YrbA family protein 1914 62.45 0 2015958..2017805 + 615 114799176 - HNE_1947 - angiotensin-converting enzyme family protein 1915 69.47 +2 2017969..2018895 - 308 114798327 - HNE_1948 - ISHne4, transposase 1916 56.55 -1 2019757..2020092 + 111 114799856 - HNE_1949 - glutaredoxin-like protein 1917 59.88 0 2020193..2020855 + 220 114797359 - HNE_1950 - putative outer surface protein 1918 62.83 0 2020928..2022283 + 451 114798740 - HNE_1951 - RNA modification protein 1919 62.95 0 2022284..2022982 - 232 114797734 - HNE_1952 - putative isonitrile hydratase 1920 61.92 0 2023049..2024017 + 322 114798987 - HNE_1953 - putative transcriptional regulator DarR 1921 60.43 0 2024112..2025041 + 309 114797961 - HNE_1954 - hypothetical protein 1922 57.70 -1 2025065..2025889 - 274 114797661 - HNE_1955 - hypothetical protein 1923 59.22 0 2025965..2026582 - 205 114798436 rpsD HNE_1956 - 30S ribosomal protein S4 1924 62.76 0 2026788..2027606 + 272 114799226 - HNE_1957 - putative 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX 1925 58.97 0 2027603..2028070 - 155 114800007 - HNE_1958 - cupin domain-containing protein 1926 60.43 0 2028087..2029289 - 400 114798700 - HNE_1959 - CAIB/BAIF family protein 1927 57.88 -1 2029370..2030245 - 291 114797892 - HNE_1960 - diguanylate cyclase 1928 55.33 -1 2030725..2031015 + 96 114797690 groES HNE_1961 - chaperonin, 10 kDa 1929 58.82 0 2031071..2032714 + 547 114800428 groL HNE_1962 - chaperonin GroEL 1930 59.16 0 2032851..2034461 + 536 114799065 - HNE_1963 - acyl-CoA synthetase 1931 62.36 0 2034467..2034907 - 146 114798448 - HNE_1964 - thioesterase family protein 1932 60.71 0 2034894..2035346 - 150 114798804 - HNE_1965 - hypothetical protein 1933 57.77 -1 2035400..2035927 - 175 114798263 - HNE_1966 - cold shock DNA-binding protein 1934 63.88 0 2036206..2037999 - 597 114797921 recJ HNE_1968 - single-stranded-DNA-specific exonuclease RecJ 1935 61.89 0 2038174..2039472 + 432 114799823 purB HNE_1969 - adenylosuccinate lyase 1936 59.88 0 2039612..2040907 + 431 114799464 - HNE_1970 - dipeptidase family protein 1937 59.46 0 2040910..2042268 + 452 114800552 - HNE_1971 - Na+/H+ antiporter family protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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