version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1718 59.82 0 1789039..1789812 + 257 114797708 nuoE HNE_1748 - NADH-quinone oxidoreductase, E subunit 1719 61.39 0 1789816..1791123 + 435 114799778 nuoF HNE_1749 - NADH dehydrogenase I subunit F 1720 58.40 -1 1791137..1791535 + 132 114798795 - HNE_1750 - hypothetical protein 1721 62.10 0 1791542..1793641 + 699 114798223 nuoG HNE_1751 - NADH dehydrogenase subunit G 1722 57.08 -1 1793651..1794745 + 364 114799074 nuoH HNE_1752 - NADH dehydrogenase subunit H 1723 59.26 0 1794742..1795227 + 161 114798298 nuoI HNE_1753 - NADH dehydrogenase subunit I 1724 58.92 0 1795299..1795892 + 197 114797370 nuoJ HNE_1754 - NADH-quinone oxidoreductase, J subunit 1725 52.43 -2 1795896..1796204 + 102 114799864 nuoK HNE_1755 - NADH-quinone oxidoreductase, K subunit 1726 57.32 -1 1796212..1798362 + 716 114798733 nuoL HNE_1756 - NADH-quinone oxidoreductase, L subunit 1727 56.09 -1 1798362..1799864 + 500 114797733 nuoM HNE_1757 - NADH-quinone oxidoreductase, M subunit 1728 55.16 -1 1799869..1801302 + 477 114800320 nuoN HNE_1758 - NADH-quinone oxidoreductase, N subunit 1729 56.51 -1 1801266..1802033 + 255 114798329 - HNE_1759 - biotin--acetyl-CoA-carboxylase ligase 1730 54.04 -2 1802037..1802804 + 255 114799332 - HNE_1760 - pantothenate kinase 1731 55.42 -1 1802801..1804498 + 565 114800376 - HNE_1761 - metallo-beta-lactamase family protein 1732 54.55 -2 1804506..1804934 + 142 114797534 - HNE_1762 - methylmalonyl-CoA epimerase 1733 55.00 -1 1804934..1805173 + 79 114800295 - HNE_1763 - hypothetical protein 1734 56.36 -1 1805221..1806540 + 439 114799658 proS HNE_1764 - prolyl-tRNA synthetase 1735 56.13 -1 1806549..1807820 + 423 114798078 - HNE_1765 - LolC/E family lipoprotein releasing system, transmembrane protein 1736 57.50 -1 1807817..1808503 + 228 114797117 - HNE_1766 - lipoprotein releasing system, ATP-binding protein,-like protein 1737 55.45 -1 1808583..1812005 + 1140 114800101 dnaE HNE_1767 - DNA polymerase III, alpha subunit 1738 58.21 -1 1812145..1812936 + 263 114799137 rpsB HNE_1768 - ribosomal protein S2 1739 55.85 -1 1812975..1813880 + 301 114799266 tsf HNE_1769 - translation elongation factor Ts 1740 54.50 -2 1813991..1814746 + 251 114798646 pyrH HNE_1770 - uridylate kinase 1741 55.32 -1 1814743..1815297 + 184 114797846 frr HNE_1771 - ribosome recycling factor 1742 54.41 -2 1815297..1816055 + 252 114798355 uppS HNE_1772 - undecaprenyl diphosphate synthase 1743 56.04 -1 1816055..1816873 + 272 114798911 cdsA HNE_1773 - phosphatidate cytidylyltransferase 1744 55.36 -1 1816880..1818073 + 397 114799124 dxr HNE_1774 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1745 54.38 -2 1818078..1819241 + 387 114800133 - HNE_1775 - M50 family peptidase 1746 53.68 -2 1819278..1821842 + 854 114797815 - HNE_1776 - OMP85 family outer membrane protein 1747 52.76 -2 1821875..1822471 + 198 114798539 - HNE_1777 - OmpH family outer membrane protein 1748 58.21 -1 1822484..1823500 + 338 114798725 lpxD HNE_1778 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1749 55.85 -1 1823540..1824334 + 264 114799420 lpxA HNE_1779 - acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase 1750 59.48 0 1824336..1825184 + 282 114797181 - HNE_1780 - hypothetical protein 1751 56.18 -1 1825181..1826353 + 390 114800386 lpxB HNE_1781 - lipid-A-disaccharide synthase 1752 57.70 -1 1826343..1827647 - 434 114797964 gltA HNE_1782 - citrate synthase I 1753 58.93 0 1827695..1829155 - 486 114798943 gltX1 HNE_1783 - glutamyl-tRNA synthetase 1754 59.47 0 1829459..1829722 - 87 114798535 - HNE_1784 - hypothetical protein 1755 56.50 -1 1829709..1830485 + 258 114799405 - HNE_1785 - hypothetical protein 1756 57.02 -1 1830466..1831149 - 227 114797550 lexA HNE_1786 - LexA repressor 1757 57.64 -1 1831216..1832013 - 265 114800153 trpC HNE_1787 - indole-3-glycerol phosphate synthase 1758 60.72 0 1832016..1833041 - 341 114797113 trpD HNE_1788 - anthranilate phosphoribosyltransferase 1759 55.50 -1 1833038..1833610 - 190 114798771 trpG HNE_1789 - anthranilate synthase component II 1760 58.39 -1 1833607..1835031 - 474 114799062 trpE HNE_1790 - anthranilate synthase component I 1761 59.51 0 1835028..1836941 - 637 114799881 - HNE_1791 - peptidylprolyl cis-trans isomerase,-like protein 1762 59.60 0 1837029..1837778 + 249 114799671 tpiA HNE_1792 - triosephosphate isomerase 1763 59.43 0 1837859..1838314 + 151 114799731 secG HNE_1793 - preprotein translocase, SecG subunit 1764 59.33 0 1838378..1840012 + 544 114800487 pyrG HNE_1794 - CTP synthetase 1765 54.15 -2 1840035..1841264 - 409 114799922 - HNE_1795 - putative cyclopropane-fatty-acyl-phospholipid synthase 1766 55.68 -1 1841261..1842070 - 269 114799149 - HNE_1796 - hypothetical protein 1767 55.58 -1 1842067..1843383 - 438 114798865 - HNE_1797 - hypothetical protein 1768 58.85 0 1843380..1844837 - 485 114797406 - HNE_1798 - deoxyribodipyrimidine photolyase family protein 1769 60.37 0 1844994..1846454 + 486 114800169 rfaE HNE_1799 - rfaE bifunctional protein 1770 52.98 -2 1846495..1846947 - 150 114798382 - HNE_1800 - hemimethylated DNA binding domain-containing protein 1771 63.20 0 1847038..1848105 + 355 114799621 - HNE_1801 - Ppx/GppA family phosphatase 1772 60.85 0 1848098..1848802 + 234 114798748 - HNE_1802 - putative ribosomal RNA large subunit methyltransferase J 1773 60.10 0 1848827..1849237 + 136 114797683 - HNE_1803 - hypothetical protein 1774 63.10 0 1849300..1850757 + 485 114800464 guaB HNE_1804 - inosine-5'-monophosphate dehydrogenase 1775 59.86 0 1850759..1851346 - 195 114799632 - HNE_1805 - acetyltransferase 1776 61.47 0 1851448..1852755 + 435 114798023 - HNE_1806 - NOL1/NOP2/sun domain-containing protein 1777 59.24 0 1852759..1853835 - 358 114797193 - HNE_1807 - beta-hydroxylase 1778 59.65 0 1853924..1855504 + 526 114797176 guaA HNE_1808 - bifunctional GMP synthase/glutamine amidotransferase protein 1779 61.23 0 1855670..1856755 + 361 114800128 - HNE_1809 - flavin reductase family protein 1780 57.84 -1 1857062..1857865 - 267 114798446 - HNE_1810 - metallo-beta-lactamase family protein 1781 57.01 -1 1857862..1858638 - 258 114798238 - HNE_1811 - TatD family hydrolase 1782 65.38 0 1858649..1859584 - 311 114798506 - HNE_1812 - putative DNA polymerase III, delta prime subunit 1783 63.94 0 1859581..1860240 - 219 114799318 tmk HNE_1813 - thymidylate kinase 1784 60.07 0 1860233..1861369 - 378 114799690 - HNE_1814 - D-alanyl-D-alanine carboxypeptidase 1785 63.99 0 1861505..1862737 - 410 114797813 rlpA HNE_1815 - rare lipoprotein A 1786 62.13 0 1863652..1864224 + 190 114799320 - HNE_1817 - phosphoglycerate mutase family protein 1787 64.85 0 1864443..1865981 + 512 114797459 - HNE_1818 - 2-nitropropane dioxygenase family oxidoreductase 1788 66.95 +1 1871324..1877404 + 2026 114799051 - HNE_1820 - putative polyketide synthase 1789 63.32 0 1878223..1879359 + 378 114799688 - HNE_1821 - OmpA family protein 1790 62.26 0 1879403..1881148 + 581 114797145 - HNE_1822 - hypothetical protein 1791 62.83 0 1881247..1882446 + 399 114798240 fidA HNE_1823 - E-cinnamoyl-CoA:R-phenyllactate CoA transferase, large subunit 1792 61.15 0 1882510..1883307 - 265 114800390 - HNE_1824 - enoyl-CoA hydratase 1793 60.55 0 1883334..1884134 - 266 114799178 - HNE_1825 - hypothetical protein 1794 59.71 0 1884138..1885028 - 296 114798417 mmsB HNE_1826 - 3-hydroxyisobutyrate dehydrogenase 1795 57.27 -1 1885030..1885806 - 258 114797149 - HNE_1827 - enoyl-CoA hydratase 1796 60.72 0 1885813..1887309 - 498 114799926 mmsA1 HNE_1828 - methylmalonate-semialdehyde dehydrogenase 1797 61.10 0 1887693..1888877 + 394 114800488 - HNE_1830 - hypothetical protein 1798 59.08 0 1888945..1890684 + 579 114798101 metG HNE_1831 - methionyl-tRNA synthetase 1799 60.04 0 1890689..1891171 + 160 114797573 - HNE_1832 - hypothetical protein 1800 63.17 0 1891168..1891824 - 218 114800107 - HNE_1833 - hypothetical protein 1801 60.95 0 1891814..1892827 - 337 114798510 - HNE_1834 - aldo/keto reductase family oxidoreductase 1802 61.07 0 1892838..1894589 - 583 114797684 fcs3 HNE_1835 - feruloyl-CoA synthetase 1803 54.98 -1 1894768..1895349 - 193 114797068 - HNE_1836 - hypothetical protein 1804 60.75 0 1895384..1896025 - 213 114799586 - HNE_1837 - putative lipoprotein 1805 62.04 0 1896131..1898053 - 640 114798103 dxs HNE_1838 - 1-deoxy-D-xylulose-5-phosphate synthase 1806 61.49 0 1898089..1898976 - 295 114797210 ispA HNE_1839 - geranyltranstransferase 1807 60.16 0 1899008..1899253 - 81 114800150 xseB HNE_1840 - exodeoxyribonuclease VII, small subunit 1808 64.84 0 1899325..1899927 - 200 114800175 - HNE_1841 - phosphoglycerate mutase family protein 1809 61.00 0 1900020..1900796 - 258 114798259 lepB HNE_1842 - signal peptidase I 1810 61.13 0 1900977..1902041 - 354 114799081 - HNE_1843 - metallo-beta-lactamase family protein 1811 63.63 0 1902097..1903215 - 372 114799825 - HNE_1844 - ribosomal large subunit pseudouridine synthase F 1812 64.86 0 1903285..1905054 - 589 114797077 - HNE_1845 - acyl-CoA dehydrogenase family protein 1813 61.67 0 1905176..1905916 + 246 114798699 - HNE_1846 - YceI-like family protein 1814 59.64 0 1905923..1907131 + 402 114799485 - HNE_1847 - nickel-dependent hydrogenase, b-type cytochrome subunit/YceI-like family protein 1815 64.23 0 1907192..1908133 + 313 114798799 - HNE_1848 - Sua5/YciO/YrdC/YwlC family protein 1816 53.52 -2 1908144..1908356 - 70 114799391 - HNE_1849 - hypothetical protein 1817 62.59 0 1908449..1909258 - 269 114797254 cysE HNE_1850 - serine O-acetyltransferase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0