version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1656 63.62 0 1727505..1728293 - 262 114800228 - HNE_1684 - short chain dehydrogenase 1657 59.82 0 1728290..1728625 - 111 114799392 - HNE_1685 - hypothetical protein 1658 60.48 0 1728726..1729097 + 123 114799063 - HNE_1686 - putative transcriptional regulator 1659 62.75 0 1729596..1729901 + 101 114798120 - HNE_1687 - hypothetical protein 1660 54.96 -1 1730095..1730487 - 130 114799442 merR HNE_1688 - mercuric resistance operon regulatory protein 1661 57.33 -1 1730591..1730965 + 124 114798313 merT HNE_1689 - mercuric transport protein MerT 1662 59.42 0 1731026..1731301 + 91 114797310 merP HNE_1690 - mercuric transport protein, periplasmic component 1663 61.40 0 1731485..1732909 + 474 114799977 merA HNE_1691 - mercuric reductase 1664 63.18 0 1733036..1733494 - 152 114799672 - HNE_1692 - hypothetical protein 1665 62.96 0 1733491..1736700 - 1069 114800435 - HNE_1693 - CzcA family heavy metal efflux protein 1666 63.90 0 1736697..1738505 - 602 114797593 - HNE_1694 - RND family efflux transporter MFP subunit 1667 66.09 +1 1738502..1739719 - 405 114798550 - HNE_1695 - outer membrane efflux protein 1668 57.54 -1 1739783..1740067 - 94 114798940 - HNE_1696 - hypothetical protein 1669 59.72 0 1740074..1740217 + 47 114799808 - HNE_1697 - hypothetical protein 1670 51.85 -2 1740863..1741699 + 278 114797482 - HNE_1698 - sigma-70 region 2 1671 56.92 -1 1741696..1742331 + 211 114798155 - HNE_1699 - hypothetical protein 1672 62.28 0 1742747..1745137 - 796 114798511 - HNE_1700 - copper-translocating P-type ATPase 1673 58.36 -1 1745237..1746091 - 284 114799255 - HNE_1701 - hypothetical protein 1674 63.41 0 1746176..1746913 - 245 114799885 - HNE_1702 - AraC family transcriptional regulator 1675 57.50 -1 1746913..1747392 - 159 114798710 - HNE_1703 - hypothetical protein 1676 64.62 0 1747403..1748233 - 276 114798187 copD HNE_1704 - copper resistance protein D 1677 57.06 -1 1748245..1748598 - 117 114797680 copC HNE_1705 - copper resistance protein CopC 1678 58.24 -1 1748640..1749422 - 260 114799827 - HNE_1706 - copper resistance protein B 1679 61.81 0 1749437..1751290 - 617 114799240 - HNE_1707 - CopA family copper resistance protein 1680 62.18 0 1751359..1751937 - 192 114798993 - HNE_1708 - putative copper resistance protein 1681 55.80 -1 1752531..1752806 + 91 114799728 - HNE_1709 - hypothetical protein 1682 56.45 -1 1752845..1753030 - 61 114797824 - HNE_1710 - hypothetical protein 1683 58.46 0 1753123..1753317 + 64 114798627 - HNE_1711 - hypothetical protein 1684 51.85 -2 1753481..1753588 - 35 114798289 - HNE_1712 - hypothetical protein 1685 62.90 0 1753588..1755579 - 663 114799122 cadA HNE_1713 - cadmium-translocating P-type ATPase 1686 61.72 0 1755655..1758768 - 1037 114799378 - HNE_1714 - CzcA family heavy metal efflux protein 1687 62.84 0 1758795..1760099 - 434 114800179 - HNE_1715 - RND family efflux transporter MFP subunit 1688 67.13 +1 1760096..1761391 - 431 114798625 - HNE_1716 - efflux transporter, outer membrane factor 1689 58.48 0 1761469..1761993 - 174 114797850 - HNE_1717 - hypothetical protein 1690 55.91 -1 1762406..1762591 - 61 114799241 - HNE_1718 - prophage CP4-57 regulatory protein AlpA family protein 1691 58.50 0 1762696..1763001 - 101 114797995 - HNE_1719 - hypothetical protein 1692 69.88 +2 1763238..1764482 - 414 114797320 - HNE_1720 - type IV secretion system protein TrbI family protein 1693 66.56 +1 1764487..1765446 - 319 114799000 - HNE_1721 - type IV secretion system protein TrbG family protein 1694 54.17 -2 1765486..1766685 + 399 114799573 - HNE_1722 - malate dehydrogenase domain-containing protein 1695 56.28 -1 1766682..1767047 + 121 114800185 - HNE_1723 - hypothetical protein 1696 56.18 -1 1767050..1767850 + 266 114799397 - HNE_1724 - hypothetical protein 1697 54.34 -2 1768669..1769844 + 391 114797436 - HNE_1725 - putative helicase 1698 59.82 0 1769754..1770410 - 218 114798193 - HNE_1726 - MerR family transcriptional regulator 1699 60.77 0 1770472..1771098 + 208 114799140 - HNE_1727 - cation efflux family protein 1700 58.06 -1 1771095..1771559 + 154 114797959 lspA2 HNE_1728 - signal peptidase II 1701 60.92 0 1771923..1773140 - 405 114797188 - HNE_1729 - phage integrase family site specific recombinase 1702 65.77 0 1773446..1773667 - 73 114799923 - HNE_1731 - hypothetical protein 1703 68.07 +1 1773664..1774734 - 356 114797667 - HNE_1732 - hypothetical protein 1704 62.73 0 1774739..1776289 - 516 114798439 pgi HNE_1733 - glucose-6-phosphate isomerase 1705 62.22 0 1776506..1777696 + 396 114799205 tuf1 HNE_1734 - elongation factor Tu 1706 61.02 0 1777764..1778312 - 182 114800212 - HNE_1735 - carboxymuconolactone decarboxylase domain-containing protein 1707 59.62 0 1778583..1780199 + 538 114799867 - HNE_1737 - glycosy hydrolase family protein 1708 58.57 0 1780289..1781758 + 489 114799637 zwf HNE_1738 - glucose-6-phosphate 1-dehydrogenase 1709 61.32 0 1781763..1782473 + 236 114798389 pgl HNE_1739 - 6-phosphogluconolactonase 1710 63.88 0 1782476..1784308 + 610 114797638 edd HNE_1740 - phosphogluconate dehydratase 1711 59.55 0 1784312..1785280 + 322 114800054 glk HNE_1741 - glucokinase 1712 55.20 -1 1785466..1785840 + 124 114798172 nuoA HNE_1742 - NADH-quinone oxidoreductase, A subunit 1713 61.61 0 1785840..1786412 + 190 114799608 nuoB HNE_1743 - NADH dehydrogenase subunit B 1714 60.26 0 1786424..1787032 + 202 114799741 nuoC HNE_1744 - NADH dehydrogenase subunit C 1715 62.17 0 1787064..1788242 + 392 114800277 nuoD HNE_1745 - NADH dehydrogenase subunit D 1716 61.78 0 1788239..1788586 + 115 114799343 - HNE_1746 - hypothetical protein 1717 59.60 0 1788586..1789038 + 150 114798704 - HNE_1747 - glyoxalase family protein 1718 59.82 0 1789039..1789812 + 257 114797708 nuoE HNE_1748 - NADH-quinone oxidoreductase, E subunit 1719 61.39 0 1789816..1791123 + 435 114799778 nuoF HNE_1749 - NADH dehydrogenase I subunit F 1720 58.40 -1 1791137..1791535 + 132 114798795 - HNE_1750 - hypothetical protein 1721 62.10 0 1791542..1793641 + 699 114798223 nuoG HNE_1751 - NADH dehydrogenase subunit G 1722 57.08 -1 1793651..1794745 + 364 114799074 nuoH HNE_1752 - NADH dehydrogenase subunit H 1723 59.26 0 1794742..1795227 + 161 114798298 nuoI HNE_1753 - NADH dehydrogenase subunit I 1724 58.92 0 1795299..1795892 + 197 114797370 nuoJ HNE_1754 - NADH-quinone oxidoreductase, J subunit 1725 52.43 -2 1795896..1796204 + 102 114799864 nuoK HNE_1755 - NADH-quinone oxidoreductase, K subunit 1726 57.32 -1 1796212..1798362 + 716 114798733 nuoL HNE_1756 - NADH-quinone oxidoreductase, L subunit 1727 56.09 -1 1798362..1799864 + 500 114797733 nuoM HNE_1757 - NADH-quinone oxidoreductase, M subunit 1728 55.16 -1 1799869..1801302 + 477 114800320 nuoN HNE_1758 - NADH-quinone oxidoreductase, N subunit 1729 56.51 -1 1801266..1802033 + 255 114798329 - HNE_1759 - biotin--acetyl-CoA-carboxylase ligase 1730 54.04 -2 1802037..1802804 + 255 114799332 - HNE_1760 - pantothenate kinase 1731 55.42 -1 1802801..1804498 + 565 114800376 - HNE_1761 - metallo-beta-lactamase family protein 1732 54.55 -2 1804506..1804934 + 142 114797534 - HNE_1762 - methylmalonyl-CoA epimerase 1733 55.00 -1 1804934..1805173 + 79 114800295 - HNE_1763 - hypothetical protein 1734 56.36 -1 1805221..1806540 + 439 114799658 proS HNE_1764 - prolyl-tRNA synthetase 1735 56.13 -1 1806549..1807820 + 423 114798078 - HNE_1765 - LolC/E family lipoprotein releasing system, transmembrane protein 1736 57.50 -1 1807817..1808503 + 228 114797117 - HNE_1766 - lipoprotein releasing system, ATP-binding protein,-like protein 1737 55.45 -1 1808583..1812005 + 1140 114800101 dnaE HNE_1767 - DNA polymerase III, alpha subunit 1738 58.21 -1 1812145..1812936 + 263 114799137 rpsB HNE_1768 - ribosomal protein S2 1739 55.85 -1 1812975..1813880 + 301 114799266 tsf HNE_1769 - translation elongation factor Ts 1740 54.50 -2 1813991..1814746 + 251 114798646 pyrH HNE_1770 - uridylate kinase 1741 55.32 -1 1814743..1815297 + 184 114797846 frr HNE_1771 - ribosome recycling factor 1742 54.41 -2 1815297..1816055 + 252 114798355 uppS HNE_1772 - undecaprenyl diphosphate synthase 1743 56.04 -1 1816055..1816873 + 272 114798911 cdsA HNE_1773 - phosphatidate cytidylyltransferase 1744 55.36 -1 1816880..1818073 + 397 114799124 dxr HNE_1774 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1745 54.38 -2 1818078..1819241 + 387 114800133 - HNE_1775 - M50 family peptidase 1746 53.68 -2 1819278..1821842 + 854 114797815 - HNE_1776 - OMP85 family outer membrane protein 1747 52.76 -2 1821875..1822471 + 198 114798539 - HNE_1777 - OmpH family outer membrane protein 1748 58.21 -1 1822484..1823500 + 338 114798725 lpxD HNE_1778 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1749 55.85 -1 1823540..1824334 + 264 114799420 lpxA HNE_1779 - acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase 1750 59.48 0 1824336..1825184 + 282 114797181 - HNE_1780 - hypothetical protein 1751 56.18 -1 1825181..1826353 + 390 114800386 lpxB HNE_1781 - lipid-A-disaccharide synthase 1752 57.70 -1 1826343..1827647 - 434 114797964 gltA HNE_1782 - citrate synthase I 1753 58.93 0 1827695..1829155 - 486 114798943 gltX1 HNE_1783 - glutamyl-tRNA synthetase 1754 59.47 0 1829459..1829722 - 87 114798535 - HNE_1784 - hypothetical protein 1755 56.50 -1 1829709..1830485 + 258 114799405 - HNE_1785 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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