version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1610 62.11 0 1673109..1674425 + 438 114798139 - HNE_1636 - protein kinase 1611 62.76 0 1674477..1675424 + 315 114798920 - HNE_1637 - cysteine protease 1612 63.28 0 1675467..1675997 - 176 114798349 - HNE_1638 - MarR family transcriptional regulator 1613 59.82 0 1676180..1676749 + 189 114797806 ectA HNE_1639 - L-2,4-diaminobutyric acid acetyltransferase 1614 60.34 0 1676795..1678090 + 431 114799897 ectB HNE_1640 - diaminobutyrate--2-oxoglutarate aminotransferase 1615 57.35 -1 1678102..1678509 + 135 114799353 ectC HNE_1641 - L-ectoine synthase 1616 59.77 0 1678526..1679467 + 313 114798545 - HNE_1642 - ectoine hydroxylase 1617 60.59 0 1679469..1680917 + 482 114800224 - HNE_1643 - aspartate kinase 1618 67.78 +1 1680923..1682266 + 447 114798292 - HNE_1644 - major facilitator family transporter 1619 62.53 0 1682263..1683714 + 483 114797475 - HNE_1645 - solute/sodium symporter (SSS) family protein 1620 64.21 0 1684011..1685354 + 447 114799816 - HNE_1646 - RND family efflux transporter MFP subunit 1621 65.33 0 1685368..1687305 + 645 114800370 - HNE_1647 - putative macrolide efflux ABC transporter, permease/ATP-binding protein 1622 66.30 +1 1687311..1688663 + 450 114800045 - HNE_1648 - RND efflux system outer membrane lipoprotein 1623 60.55 0 1688854..1689540 + 228 114798397 - HNE_1649 - hypothetical protein 1624 63.37 0 1689551..1690066 + 171 114799383 - HNE_1650 - hypothetical protein 1625 62.13 0 1690103..1690918 + 271 114799602 - HNE_1651 - hypothetical protein 1626 66.15 +1 1690915..1691889 + 324 114798499 - HNE_1652 - ApbE family protein 1627 58.75 0 1692075..1694474 + 799 114799533 - HNE_1653 - TonB-dependent receptor 1628 63.36 0 1694636..1696297 + 553 114799766 dld HNE_1654 - D-lactate dehydrogenase 1629 61.80 0 1696304..1697125 - 273 114797275 - HNE_1655 - putative transcriptional regulator 1630 69.42 +1 1697350..1698039 - 229 114799125 - HNE_1656 - hypothetical protein 1631 56.10 -1 1698153..1698275 - 40 114797694 - HNE_1657 - cyd operon protein YbgT 1632 64.92 0 1698289..1699431 - 380 114798433 cydB HNE_1658 - cytochrome d ubiquinol oxidase, subunit II 1633 60.47 0 1699444..1701024 - 526 114799451 cydA HNE_1659 - cytochrome d ubiquinol oxidase subunit I 1634 67.56 +1 1701155..1702834 + 559 114800530 - HNE_1660 - amino acid ABC transporter, permease/ATP-binding protein CydD, putaive 1635 68.74 +1 1702834..1704474 + 546 114798368 - HNE_1661 - putative amino acid ABC transporter, ATP-binding protein CydC 1636 62.59 0 1704471..1705427 - 318 114797695 - HNE_1662 - hypothetical protein 1637 64.97 0 1706392..1706979 + 195 114800196 - HNE_1663 - putative 2-hydroxychromene-2-carboxylate isomerase 1638 62.00 0 1707008..1707457 + 149 114798878 - HNE_1664 - hypothetical protein 1639 61.49 0 1707522..1708139 + 205 114798125 - HNE_1665 - hypothetical protein 1640 63.29 0 1708256..1709026 + 256 114799422 - HNE_1666 - hypothetical protein 1641 60.97 0 1709033..1710559 - 508 114798452 - HNE_1667 - sulfatase family protein 1642 63.02 0 1710684..1712465 - 593 114797882 - HNE_1668 - sulfatase family protein 1643 66.47 +1 1712611..1713612 + 333 114800462 - HNE_1669 - hypothetical protein 1644 64.92 0 1713609..1715207 + 532 114799722 - HNE_1670 - putative DNA ligase, ATP-dependent 1645 63.03 0 1715301..1717253 + 650 114799022 - HNE_1671 - metallo-beta-lactamase family protein 1646 61.15 0 1717309..1717689 - 126 114798166 - HNE_1672 - hypothetical protein 1647 58.49 0 1717774..1718739 - 321 114797388 - HNE_1673 - hypothetical protein 1648 60.86 0 1718881..1719414 - 177 114799811 - HNE_1674 - acetyltransferase 1649 65.56 0 1719404..1720306 - 300 114799029 - HNE_1675 - putative asparaginase 1650 60.75 0 1720427..1723147 - 906 114798244 valS HNE_1676 - valyl-tRNA synthetase 1651 63.94 0 1723237..1723896 - 219 114797380 - HNE_1677 - hypothetical protein 1652 65.81 +1 1723997..1725277 - 426 114800241 - HNE_1678 - TolC family type I secretion outer membrane protein 1653 64.54 0 1725372..1726028 - 218 114799434 - HNE_1679 - putative protein-L-isoaspartate(D-aspartate) O-methyltransferase 1654 59.89 0 1726389..1726565 + 58 114799521 - HNE_1681 - hypothetical protein 1655 64.22 0 1726709..1727281 - 190 114798376 - HNE_1683 - acetyltransferase 1656 63.62 0 1727505..1728293 - 262 114800228 - HNE_1684 - short chain dehydrogenase 1657 59.82 0 1728290..1728625 - 111 114799392 - HNE_1685 - hypothetical protein 1658 60.48 0 1728726..1729097 + 123 114799063 - HNE_1686 - putative transcriptional regulator 1659 62.75 0 1729596..1729901 + 101 114798120 - HNE_1687 - hypothetical protein 1660 54.96 -1 1730095..1730487 - 130 114799442 merR HNE_1688 - mercuric resistance operon regulatory protein 1661 57.33 -1 1730591..1730965 + 124 114798313 merT HNE_1689 - mercuric transport protein MerT 1662 59.42 0 1731026..1731301 + 91 114797310 merP HNE_1690 - mercuric transport protein, periplasmic component 1663 61.40 0 1731485..1732909 + 474 114799977 merA HNE_1691 - mercuric reductase 1664 63.18 0 1733036..1733494 - 152 114799672 - HNE_1692 - hypothetical protein 1665 62.96 0 1733491..1736700 - 1069 114800435 - HNE_1693 - CzcA family heavy metal efflux protein 1666 63.90 0 1736697..1738505 - 602 114797593 - HNE_1694 - RND family efflux transporter MFP subunit 1667 66.09 +1 1738502..1739719 - 405 114798550 - HNE_1695 - outer membrane efflux protein 1668 57.54 -1 1739783..1740067 - 94 114798940 - HNE_1696 - hypothetical protein 1669 59.72 0 1740074..1740217 + 47 114799808 - HNE_1697 - hypothetical protein 1670 51.85 -2 1740863..1741699 + 278 114797482 - HNE_1698 - sigma-70 region 2 1671 56.92 -1 1741696..1742331 + 211 114798155 - HNE_1699 - hypothetical protein 1672 62.28 0 1742747..1745137 - 796 114798511 - HNE_1700 - copper-translocating P-type ATPase 1673 58.36 -1 1745237..1746091 - 284 114799255 - HNE_1701 - hypothetical protein 1674 63.41 0 1746176..1746913 - 245 114799885 - HNE_1702 - AraC family transcriptional regulator 1675 57.50 -1 1746913..1747392 - 159 114798710 - HNE_1703 - hypothetical protein 1676 64.62 0 1747403..1748233 - 276 114798187 copD HNE_1704 - copper resistance protein D 1677 57.06 -1 1748245..1748598 - 117 114797680 copC HNE_1705 - copper resistance protein CopC 1678 58.24 -1 1748640..1749422 - 260 114799827 - HNE_1706 - copper resistance protein B 1679 61.81 0 1749437..1751290 - 617 114799240 - HNE_1707 - CopA family copper resistance protein 1680 62.18 0 1751359..1751937 - 192 114798993 - HNE_1708 - putative copper resistance protein 1681 55.80 -1 1752531..1752806 + 91 114799728 - HNE_1709 - hypothetical protein 1682 56.45 -1 1752845..1753030 - 61 114797824 - HNE_1710 - hypothetical protein 1683 58.46 0 1753123..1753317 + 64 114798627 - HNE_1711 - hypothetical protein 1684 51.85 -2 1753481..1753588 - 35 114798289 - HNE_1712 - hypothetical protein 1685 62.90 0 1753588..1755579 - 663 114799122 cadA HNE_1713 - cadmium-translocating P-type ATPase 1686 61.72 0 1755655..1758768 - 1037 114799378 - HNE_1714 - CzcA family heavy metal efflux protein 1687 62.84 0 1758795..1760099 - 434 114800179 - HNE_1715 - RND family efflux transporter MFP subunit 1688 67.13 +1 1760096..1761391 - 431 114798625 - HNE_1716 - efflux transporter, outer membrane factor 1689 58.48 0 1761469..1761993 - 174 114797850 - HNE_1717 - hypothetical protein 1690 55.91 -1 1762406..1762591 - 61 114799241 - HNE_1718 - prophage CP4-57 regulatory protein AlpA family protein 1691 58.50 0 1762696..1763001 - 101 114797995 - HNE_1719 - hypothetical protein 1692 69.88 +2 1763238..1764482 - 414 114797320 - HNE_1720 - type IV secretion system protein TrbI family protein 1693 66.56 +1 1764487..1765446 - 319 114799000 - HNE_1721 - type IV secretion system protein TrbG family protein 1694 54.17 -2 1765486..1766685 + 399 114799573 - HNE_1722 - malate dehydrogenase domain-containing protein 1695 56.28 -1 1766682..1767047 + 121 114800185 - HNE_1723 - hypothetical protein 1696 56.18 -1 1767050..1767850 + 266 114799397 - HNE_1724 - hypothetical protein 1697 54.34 -2 1768669..1769844 + 391 114797436 - HNE_1725 - putative helicase 1698 59.82 0 1769754..1770410 - 218 114798193 - HNE_1726 - MerR family transcriptional regulator 1699 60.77 0 1770472..1771098 + 208 114799140 - HNE_1727 - cation efflux family protein 1700 58.06 -1 1771095..1771559 + 154 114797959 lspA2 HNE_1728 - signal peptidase II 1701 60.92 0 1771923..1773140 - 405 114797188 - HNE_1729 - phage integrase family site specific recombinase 1702 65.77 0 1773446..1773667 - 73 114799923 - HNE_1731 - hypothetical protein 1703 68.07 +1 1773664..1774734 - 356 114797667 - HNE_1732 - hypothetical protein 1704 62.73 0 1774739..1776289 - 516 114798439 pgi HNE_1733 - glucose-6-phosphate isomerase 1705 62.22 0 1776506..1777696 + 396 114799205 tuf1 HNE_1734 - elongation factor Tu 1706 61.02 0 1777764..1778312 - 182 114800212 - HNE_1735 - carboxymuconolactone decarboxylase domain-containing protein 1707 59.62 0 1778583..1780199 + 538 114799867 - HNE_1737 - glycosy hydrolase family protein 1708 58.57 0 1780289..1781758 + 489 114799637 zwf HNE_1738 - glucose-6-phosphate 1-dehydrogenase 1709 61.32 0 1781763..1782473 + 236 114798389 pgl HNE_1739 - 6-phosphogluconolactonase 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0