version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 111 61.83 0 98773..99372 + 199 114800120 - HNE_0111 - hypothetical protein 112 61.10 0 99369..101147 + 592 114799070 nusA HNE_0112 - transcription termination factor NusA 113 61.57 0 101122..101808 + 228 114798650 - HNE_0113 - hypothetical protein 114 62.72 0 101864..104425 + 853 114797688 infB HNE_0114 - translation initiation factor IF-2 115 62.75 0 104435..104842 + 135 114799473 rbfA HNE_0115 - ribosome-binding factor A 116 62.01 0 105005..105562 + 185 114800142 - HNE_0116 - hypothetical protein 117 64.54 0 105695..106636 + 313 114799976 truB HNE_0117 - tRNA pseudouridine synthase B 118 66.67 +1 106637..106873 - 78 114797236 - HNE_0118 - hypothetical protein 119 61.86 0 107521..108228 - 235 114797682 - HNE_0119 - putative lipoprotein 120 62.28 0 108400..108900 + 166 114800218 msrB1 HNE_0120 - methionine-R-sulfoxide reductase 121 67.94 +1 108966..109358 - 130 114798277 - HNE_0121 - hypothetical protein 122 61.90 0 109355..109690 - 111 114797689 - HNE_0122 - hypothetical protein 123 64.47 0 109703..110338 - 211 114797302 - HNE_0123 - hypothetical protein 124 69.89 +2 110388..110759 - 123 114798871 - HNE_0124 - hypothetical protein 125 61.94 0 110804..111586 - 260 114797825 bdhA HNE_0125 - 3-hydroxybutyrate dehydrogenase 126 61.38 0 111682..112116 + 144 114800450 - HNE_0126 - hypothetical protein 127 66.24 +1 112243..112947 + 234 114799432 - HNE_0127 - hypothetical protein 128 66.67 +1 112944..113813 + 289 114799810 pyrF HNE_0128 - orotidine 5'-phosphate decarboxylase 129 63.93 0 113966..116119 + 717 114797244 adhA HNE_0129 - alcohol dehydrogenase (acceptor) 130 65.00 0 116258..116797 + 179 114798229 - HNE_0130 - hypothetical protein 131 59.39 0 116868..117692 + 274 114797508 - HNE_0131 - hypothetical protein 132 62.34 0 117676..118368 - 230 114800131 - HNE_0132 - glutathione S-transferase 133 65.99 +1 118365..118661 - 98 114797485 - HNE_0133 - hypothetical protein 134 56.92 -1 118811..119518 + 235 114798071 - HNE_0134 - TetR family transcriptional regulator 135 64.67 0 119583..119732 + 49 114799071 - HNE_0135 - hypothetical protein 136 68.49 +1 119883..120980 - 365 114797789 gcp HNE_0136 - O-sialoglycoprotein endopeptidase 137 68.02 +1 121016..121756 - 246 114798778 - HNE_0137 - YceI family protein 138 58.80 0 122241..122672 + 143 114799309 - HNE_0138 - hypothetical protein 139 61.43 0 122692..124506 - 604 114800355 lepA HNE_0139 - GTP-binding protein LepA 140 60.80 0 124623..125474 + 283 114797303 - HNE_0140 - hypothetical protein 141 62.58 0 125443..126273 + 276 114798287 - HNE_0141 - hypothetical protein 142 64.58 0 126362..126937 + 191 114800011 - HNE_0142 - putative lipoprotein 143 61.93 0 126950..128047 + 365 114798450 - HNE_0143 - Rieske 2Fe-2S family protein 144 61.20 0 128185..128769 + 194 114797636 - HNE_0144 - fasciclin domain-containing protein 145 67.26 +1 128909..129412 + 167 114799962 ruvC HNE_0145 - crossover junction endodeoxyribonuclease RuvC 146 65.38 0 129409..130032 + 207 114798884 ruvA HNE_0146 - Holliday junction DNA helicase RuvA 147 66.47 +1 130029..131063 + 344 114800414 ruvB HNE_0147 - Holliday junction DNA helicase B 148 68.42 +1 131064..131462 - 132 114799614 - HNE_0148 - hypothetical protein 149 62.83 0 131539..132684 + 381 114797615 - HNE_0149 - hypothetical protein 150 58.99 0 132681..133136 + 151 114797377 - HNE_0150 - thioesterase family protein 151 62.73 0 133454..134164 + 236 114799599 tolQ HNE_0151 - protein TolQ 152 62.89 0 134177..134626 + 149 114799773 - HNE_0152 - ExbD/TolR family transport energizing protein 153 62.66 0 134652..135575 + 307 114798960 - HNE_0153 - hypothetical protein 154 63.05 0 135616..136971 + 451 114798605 tolB HNE_0154 - tolB protein 155 61.88 0 137204..137746 + 180 114797840 - HNE_0155 - ompA family protein 156 66.25 +1 137861..138817 + 318 114800143 - HNE_0156 - hypothetical protein 157 65.49 0 138805..139908 + 367 114799417 tilS HNE_0157 - tRNA(Ile)-lysidine synthetase 158 61.25 0 139957..141876 + 639 114797326 ftsH HNE_0158 - ATP-dependent metalloprotease FtsH 159 61.80 0 141950..142606 + 218 114800066 - HNE_0159 - hypothetical protein 160 61.21 0 142647..142976 + 109 114797110 - HNE_0160 - hypothetical protein 161 59.82 0 143079..143837 + 252 114799876 - HNE_0161 - hypothetical protein 162 60.54 0 143838..145013 - 391 114798254 - HNE_0162 - L-carnitine dehydratase 163 63.17 0 145081..146508 - 475 114797399 - HNE_0163 - hypothetical protein 164 57.60 -1 146696..149584 + 962 114799790 - HNE_0164 - TonB-dependent receptor 165 59.34 0 149724..152084 - 786 114798938 - HNE_0165 - tonB dependent receptor 166 59.35 0 152262..153218 - 318 114798639 - HNE_0166 - GDXG family lipase 167 59.76 0 153300..155153 - 617 114797895 fcs1 HNE_0167 - acyl-CoA synthetase 168 59.93 0 155246..156595 - 449 114800209 glmM HNE_0168 - phosphoglucosamine mutase 169 61.34 0 156619..157407 - 262 114799459 cysQ HNE_0169 - 3'(2'),5'-bisphosphate nucleotidase 170 57.30 -1 157423..158319 - 298 114797197 - HNE_0170 - peptidyl-prolyl cis-trans isomerase, FKBP-type 171 60.80 0 158401..159627 - 408 114797934 ilvA HNE_0171 - threonine dehydratase 172 59.88 0 159673..161544 - 623 114797610 - HNE_0172 - peptide ABC transporter, ATP-binding protein 173 58.44 0 161673..162353 - 226 114800389 - HNE_0173 - putative outer membrane protein OmpW 174 60.14 0 162628..163761 + 377 114798252 gbd HNE_0174 - 4-hydroxybutyrate dehydrogenase, NAD-dependent 175 57.19 -1 163771..164445 + 224 114797489 - HNE_0175 - hypothetical protein 176 57.98 -1 164452..165510 - 352 114799802 - HNE_0176 - 3-phytase 177 60.64 0 165592..166470 - 292 114798930 - HNE_0177 - CHAD domain-containing protein 178 58.39 -1 166626..167048 + 140 114798757 - HNE_0178 - hypothetical protein 179 59.64 0 167045..167428 - 127 114797635 - HNE_0179 - hypothetical protein 180 59.58 0 167642..168940 + 432 114800245 phaZ HNE_0180 - polyhydroxyalkanoate depolymerase, intracellular 181 60.80 0 168947..170020 - 357 114798354 - HNE_0181 - cysteine synthase/cystathionine beta-synthase family protein 182 53.33 -2 170081..170575 + 164 114798689 - HNE_0182 - AsnC family transcriptional regulator 183 61.50 0 170572..171423 - 283 114797420 - HNE_0183 - hypothetical protein 184 62.47 0 171493..172302 - 269 114800197 - HNE_0184 - zinc/iron ABC transporter permease 185 60.16 0 172494..173138 + 214 114798529 - HNE_0185 - putative lipoprotein 186 64.22 0 173147..173842 + 231 114797981 - HNE_0186 - ABC transporter, ATP-binding protein 187 62.10 0 173839..175107 + 422 114800526 - HNE_0187 - ABC transporter, permease protein 188 61.29 0 175156..175881 + 241 114797268 - HNE_0188 - putative lipoprotein 189 57.86 -1 175881..176516 + 211 114798003 - HNE_0189 - HAD family hydrolase 190 57.97 -1 176661..177074 - 137 114798146 mscL HNE_0190 - large conductance mechanosensitive channel protein 191 63.00 0 177183..177482 - 99 114798899 ihfB HNE_0191 - integration host factor, beta subunit 192 61.26 0 177598..179577 - 659 114797862 rpsA HNE_0192 - 30S ribosomal protein S1 193 62.91 0 179719..180357 - 212 114798672 cmk HNE_0193 - cytidylate kinase 194 63.74 0 180418..181509 - 363 114799497 - HNE_0194 - NADH:flavin oxidoreductase/NADH oxidase family protein 195 65.91 +1 181563..182882 - 439 114800272 aroA HNE_0195 - 3-phosphoshikimate 1-carboxyvinyltransferase 196 55.49 -1 183012..183530 + 172 114798197 - HNE_0196 - hypothetical protein 197 59.17 0 184001..184240 + 79 114800391 - HNE_0198 - hypothetical protein 198 61.70 0 184343..185590 + 415 114799624 - HNE_0199 - putative lipoprotein 199 63.77 0 185603..186637 + 344 114799280 - HNE_0200 - putative lipoprotein 200 65.81 +1 186634..187098 + 154 114798243 - HNE_0201 - YaiI/YqxD family protein 201 61.95 0 187145..187759 + 204 114797270 - HNE_0202 - putative exonuclease 202 62.54 0 187861..188538 + 225 114799884 - HNE_0203 - hypothetical protein 203 65.18 0 188525..189061 + 178 114798835 - HNE_0204 - OstA family protein 204 60.54 0 189155..189889 + 244 114797827 - HNE_0205 - ABC transporter, ATP-binding protein 205 63.53 0 189908..191407 + 499 114800351 rpoN HNE_0206 - RNA polymerase factor sigma-54 206 68.09 +1 192246..193088 - 280 114799341 rbsK HNE_0207 - ribokinase 207 66.67 +1 193085..194017 - 310 114798081 - HNE_0208 - inosine-uridine preferring nucleoside hydrolase family protein 208 62.29 0 194014..194538 - 174 114797114 - HNE_0209 - hypothetical protein 209 54.90 -1 194479..194580 + 33 114798703 - HNE_0210 - hypothetical protein 210 63.47 0 194675..197803 - 1042 114797729 - HNE_0211 - AcrB/AcrD/AcrF family protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0