version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1455 61.54 0 1502482..1503495 - 337 114797371 - HNE_1475 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1456 62.21 0 1503517..1504122 - 201 114800104 leuD HNE_1476 - 3-isopropylmalate dehydratase, small subunit 1457 63.73 0 1504112..1505542 - 476 114798881 leuC2 HNE_1477 - isopropylmalate isomerase large subunit 1458 57.02 -1 1505634..1505747 + 37 114797983 - HNE_1478 - hypothetical protein 1459 61.95 0 1505868..1507838 - 656 114797316 - HNE_1479 - GGDEF/EAL domain-containing protein 1460 67.54 +1 1508304..1508531 - 75 114800439 - HNE_1480 - hypothetical protein 1461 54.23 -2 1508639..1509217 - 192 114798855 - HNE_1481 - hypothetical protein 1462 58.43 -1 1509436..1510770 - 444 114798385 - HNE_1482 - hypothetical protein 1463 62.44 0 1511028..1513418 - 796 114797834 - HNE_1483 - copper-translocating P-type ATPase 1464 58.15 -1 1513670..1514467 - 265 114797294 copB HNE_1484 - copper resistance protein B 1465 61.14 0 1514467..1516311 - 614 114798342 - HNE_1485 - CopA family copper resistance protein 1466 58.05 -1 1516382..1517089 - 235 114798721 - HNE_1486 - hypothetical protein 1467 55.80 -1 1517631..1517906 + 91 114799886 - HNE_1487 - hypothetical protein 1468 56.60 -1 1517957..1518115 - 52 114799673 - HNE_1488 - hypothetical protein 1469 59.41 0 1518165..1519211 - 348 114798432 - HNE_1489 - hypothetical protein 1470 60.32 0 1519664..1521649 + 661 114797952 - HNE_1490 - choline/carnitine/betaine transporter 1471 63.07 0 1521965..1522825 + 286 114800459 - HNE_1491 - pirin family protein 1472 58.52 0 1522946..1524025 - 359 114799249 - HNE_1492 - metallo-beta-lactamase family protein 1473 61.39 0 1524067..1525185 - 372 114797944 - HNE_1493 - aryl-alcohol dehydrogenase 1474 63.67 0 1525355..1526254 + 299 114797657 - HNE_1494 - LysR family transcriptional regulator 1475 60.32 0 1527234..1527800 + 188 114799531 - HNE_1495 - ECF sigma factor family protein 1476 62.77 0 1527903..1530389 + 828 114800033 - HNE_1496 - serine/threonine protein kinase 1477 59.89 0 1530514..1530867 + 117 114797869 - HNE_1497 - hypothetical protein 1478 63.31 0 1530923..1531399 + 158 114798690 - HNE_1498 - putative lipoprotein 1479 62.37 0 1531468..1531932 + 154 114800470 - HNE_1499 - putative lipoprotein 1480 62.06 0 1531947..1532510 + 187 114799544 - HNE_1500 - putative lipoprotein 1481 62.08 0 1532579..1533145 - 188 114798032 - HNE_1501 - putative lipoprotein 1482 63.18 0 1533186..1533989 - 267 114797141 - HNE_1502 - hypothetical protein 1483 63.92 0 1534122..1537250 + 1042 114800061 - HNE_1503 - Tat pathway signal sequence domain-containing protein 1484 56.15 -1 1538187..1538804 - 205 114800265 - HNE_1505 - TetR family transcriptional regulator 1485 56.10 -1 1538885..1539376 + 163 114798045 - HNE_1506 - hypothetical protein 1486 57.96 -1 1540249..1541190 - 313 114797095 - HNE_1507 - putative diguanylate cyclase/response regulator 1487 58.59 0 1541190..1544024 - 944 114800094 - HNE_1508 - sensor histidine kinase/response regulator 1488 60.00 0 1544021..1544410 - 129 114799067 - HNE_1509 - hypothetical protein 1489 63.69 0 1545079..1546086 + 335 114799398 - HNE_1510 - putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT 1490 63.24 0 1546083..1546841 + 252 114798325 - HNE_1511 - cobalamin 5'-phosphate synthase 1491 58.96 0 1546832..1547350 + 172 114797780 - HNE_1512 - phosphoglycerate mutase family protein 1492 55.39 -1 1547362..1547964 + 200 114800288 cobO HNE_1513 - cob(I)alamin adenosyltransferase 1493 57.20 -1 1548377..1550224 + 615 114798415 - HNE_1514 - TonB-dependent receptor 1494 60.52 0 1550234..1551079 + 281 114799541 - HNE_1515 - putative iron ABC transporter, periplasmic iron-binding protein 1495 59.39 0 1551076..1552065 + 329 114797228 - HNE_1516 - iron compound ABC transporter, permease protein 1496 62.60 0 1552058..1552819 + 253 114797990 - HNE_1517 - iron compound ABC transporter, ATP-binding protein 1497 59.94 0 1553199..1554149 + 316 114797305 cobD HNE_1519 - cobalamin biosynthesis protein CobD 1498 59.62 0 1554146..1555138 + 330 114798819 - HNE_1520 - putative threonine-phosphate decarboxylase CobC 1499 55.23 -1 1555128..1555634 - 168 114798312 cobU HNE_1521 - cobinamide kinase / cobinamide phosphate guanyltransferase 1500 63.13 0 1556123..1556773 - 216 114799223 alkB HNE_1522 - alkylated DNA repair protein AlkB 1501 58.21 -1 1557069..1557671 - 200 114799953 - HNE_1523 - hypothetical protein 1502 62.44 0 1557891..1558481 - 196 114799759 - HNE_1524 - hypothetical protein 1503 63.09 0 1558670..1559731 + 353 114797196 - HNE_1525 - sensor histidine kinase 1504 60.96 0 1559901..1560758 + 285 114798738 - HNE_1527 - hypothetical protein 1505 58.17 -1 1560761..1561066 + 101 114797735 - HNE_1528 - hypothetical protein 1506 56.30 -1 1561115..1561384 - 89 114800310 - HNE_1529 - hypothetical protein 1507 60.47 0 1561387..1561644 - 85 114799257 - HNE_1530 - hypothetical protein 1508 62.43 0 1562342..1563262 + 306 114798315 - HNE_1531 - LysR family transcriptional regulator 1509 61.74 0 1563868..1564659 - 263 114797383 - HNE_1532 - Fic family protein 1510 63.69 0 1565120..1566127 + 335 114798209 - HNE_1533 - HlyD family secretion protein 1511 61.86 0 1566154..1567881 + 575 114797777 - HNE_1534 - ABC transporter, ATP-binding protein 1512 59.72 0 1567881..1569017 + 378 114800421 - HNE_1535 - ABC transporter, permease protein 1513 57.95 -1 1569019..1570119 + 366 114799431 - HNE_1536 - ABC transporter, permease protein 1514 57.65 -1 1570120..1570773 + 217 114798028 - HNE_1537 - TetR family transcriptional regulator 1515 56.16 -1 1570858..1571190 - 110 114797066 - HNE_1538 - hypothetical protein 1516 59.10 0 1571347..1571835 - 162 114800024 - HNE_1539 - hemerythrin HHE cation binding domain-containing protein 1517 57.75 -1 1571832..1572257 - 141 114798557 - HNE_1540 - hypothetical protein 1518 62.29 0 1572392..1572802 + 136 114798504 - HNE_1541 - putative transcriptional regulator 1519 59.40 0 1572881..1573114 + 77 114797536 - HNE_1542 - hypothetical protein 1520 55.24 -1 1573133..1573237 + 34 114798419 - HNE_1543 - hypothetical protein 1521 52.85 -2 1573227..1573349 - 40 114800105 - HNE_1544 - hypothetical protein 1522 54.26 -2 1573333..1573461 - 42 114798949 - HNE_1545 - hypothetical protein 1523 57.52 -1 1573521..1574384 - 287 114797933 - HNE_1546 - hypothetical protein 1524 62.32 0 1574445..1575158 + 237 114797570 - HNE_1547 - NnrU family protein 1525 60.83 0 1575196..1575435 + 79 114800393 - HNE_1548 - putative molybdopterin converting factor 1526 58.86 0 1575445..1575918 + 157 114800205 - HNE_1549 - hypothetical protein 1527 58.63 0 1575935..1576432 + 165 114799331 moaE2 HNE_1550 - molybdopterin converting factor, subunit 2 1528 60.89 0 1576419..1576955 + 178 114797493 moaB2 HNE_1551 - molybdenum cofactor biosynthesis protein B 1529 62.99 0 1576952..1577440 + 162 114799818 moaC2 HNE_1552 - molybdenum cofactor biosynthesis protein C 1530 64.22 0 1577437..1578621 + 394 114798744 moeA1 HNE_1553 - molybdopterin biosynthesis protein MoeA 1531 54.50 -2 1578652..1579029 + 125 114797389 - HNE_1554 - limonene-1,2-epoxide hydrolase 1532 60.84 0 1579171..1581366 + 731 114797863 - HNE_1555 - ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 1533 61.15 0 1581388..1582584 + 398 114798679 - HNE_1556 - NnrS family protein 1534 60.52 0 1582786..1583778 + 330 114797605 moaA HNE_1557 - molybdenum cofactor biosynthesis protein A 1535 58.27 -1 1583775..1584548 - 257 114798895 ftrB HNE_1558 - transcriptional activator FtrB 1536 59.65 0 1584853..1587588 + 911 114798304 narK HNE_1559 - nitrite extrusion protein 1537 59.89 0 1587604..1591338 + 1244 114798640 narG HNE_1560 - nitrate reductase, alpha subunit 1538 57.71 -1 1591335..1592864 + 509 114797890 narH HNE_1561 - nitrate reductase, beta subunit 1539 56.93 -1 1592874..1593551 + 225 114800087 narJ HNE_1562 - nitrate reductase molybdenum cofactor assembly chaperone 1540 59.52 0 1593548..1594750 + 400 114797260 - HNE_1563 - hypothetical protein 1541 60.70 0 1594775..1595545 + 256 114797366 narI HNE_1564 - respiratory nitrate reductase, gamma subunit 1542 62.47 0 1595542..1596660 + 372 114799875 - HNE_1565 - putative peptidylprolyl cis-trans isomerase 1543 55.44 -1 1596692..1597252 + 186 114798885 - HNE_1566 - hypothetical protein 1544 56.49 -1 1597249..1597887 + 212 114798000 - HNE_1567 - carbonic anhydrase 1545 56.87 -1 1598761..1599873 - 370 114800441 - HNE_1568 - hypothetical protein 1546 58.05 -1 1600152..1600778 + 208 114799679 - HNE_1569 - TetR family transcriptional regulator 1547 55.85 -1 1600819..1602084 - 421 114798420 - HNE_1570 - acyl-CoA dehydrogenase family protein 1548 58.59 0 1602237..1602335 + 32 114797699 - HNE_1571 - hypothetical protein 1549 59.71 0 1602374..1603984 - 536 114798040 - HNE_1572 - GMC oxidoreductase 1550 63.83 0 1605475..1606671 - 398 114798228 moeA2 HNE_1574 - molybdopterin biosynthesis protein MoeA 1551 56.73 -1 1607217..1608584 + 455 114798991 otsA HNE_1575 - UDP-forming alpha,alpha-trehalose-phosphate synthase 1552 57.55 -1 1608637..1609338 + 233 114798428 otsB HNE_1576 - trehalose-phosphatase 1553 58.14 -1 1609335..1611104 + 589 114799613 - HNE_1577 - glycosy hydrolase family protein 1554 52.85 -2 1611133..1612254 - 373 114797441 - HNE_1578 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0