version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1301 59.33 0 1351685..1352284 + 199 114798175 - HNE_1317 - EF hand domain-containing protein 1302 63.74 0 1352385..1352930 + 181 114797400 - HNE_1318 - ECF subfamily RNA polymerase sigma factor 1303 67.54 +1 1352927..1353382 + 151 114797919 - HNE_1319 - hypothetical protein 1304 66.86 +1 1353379..1353900 + 173 114799779 - HNE_1320 - hypothetical protein 1305 59.54 0 1353897..1354331 - 144 114799005 - HNE_1321 - hypothetical protein 1306 66.53 +1 1354295..1355743 - 482 114798308 - HNE_1322 - 6-aminohexanoate-cyclic-dimer hydrolase 1307 58.88 0 1355984..1357357 + 457 114800254 - HNE_1323 - TrkH family potassium uptake protein 1308 59.75 0 1357387..1357791 - 134 114799385 - HNE_1324 - hypothetical protein 1309 61.37 0 1357788..1358108 - 106 114800163 - HNE_1325 - hypothetical protein 1310 62.14 0 1358128..1360290 - 720 114799394 mutB HNE_1326 - methylmalonyl-CoA mutase 1311 66.77 +1 1360287..1362206 - 639 114798788 mutA HNE_1327 - methylmalonyl-CoA mutase, small subunit 1312 62.75 0 1362407..1362661 + 84 114799449 - HNE_1328 - hypothetical protein 1313 61.66 0 1362968..1363966 + 332 114797358 - HNE_1329 - 2-nitropropane dioxygenase family oxidoreductase 1314 67.40 +1 1364260..1364667 + 135 114800050 - HNE_1330 - hypothetical protein 1315 68.40 +1 1364664..1365125 + 153 114798831 - HNE_1331 - hypothetical protein 1316 62.37 0 1365251..1366042 - 263 114798034 map2 HNE_1332 - methionine aminopeptidase, type I 1317 64.32 0 1366039..1366251 - 70 114797710 - HNE_1333 - hypothetical protein 1318 65.57 0 1366391..1367755 + 454 114800494 - HNE_1334 - amidase family protein 1319 68.62 +1 1367752..1369233 + 493 114799418 glpK HNE_1335 - glycerol kinase 1320 59.30 0 1369307..1371328 - 673 114800155 - HNE_1336 - S9 family peptidase 1321 59.53 0 1371644..1374640 + 998 114799350 - HNE_1337 - TonB-dependent receptor 1322 66.82 +1 1374767..1376086 + 439 114798685 - HNE_1338 - amino acid permease family protein 1323 63.60 0 1376170..1376397 + 75 114797504 - HNE_1339 - hypothetical protein 1324 61.42 0 1376397..1376720 + 107 114800091 - HNE_1340 - hypothetical protein 1325 64.67 0 1377007..1377156 + 49 114799109 - HNE_1342 - hypothetical protein 1326 67.07 +1 1377163..1378389 + 408 114798086 - HNE_1343 - cytochrome P450 family protein 1327 66.74 +1 1378444..1379724 + 426 114797160 murA HNE_1344 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1328 63.79 0 1379819..1380304 + 161 114797987 - HNE_1345 - hypothetical protein 1329 68.44 +1 1380402..1381700 + 432 114797246 hisD HNE_1346 - histidinol dehydrogenase 1330 64.01 0 1381705..1382193 + 162 114800489 - HNE_1347 - hypothetical protein 1331 64.27 0 1382160..1383161 - 333 114797756 - HNE_1348 - hypothetical protein 1332 64.91 0 1383258..1384166 + 302 114800127 - HNE_1349 - LysR family transcriptional regulator 1333 62.06 0 1384163..1384987 - 274 114797395 - HNE_1350 - fatty acid desaturase family protein 1334 62.50 0 1385023..1385238 - 71 114797523 - HNE_1351 - hypothetical protein 1335 65.20 0 1385302..1386189 - 295 114798502 - HNE_1352 - putative DNA-binding protein 1336 63.09 0 1386300..1387472 + 390 114799556 - HNE_1353 - acyltransferase family protein 1337 54.34 -2 1387584..1387802 + 72 114800246 infA HNE_1354 - translation initiation factor IF-1 1338 69.44 +2 1387808..1388383 + 191 114797086 maf HNE_1355 - maf protein 1339 59.58 0 1388510..1389271 + 253 114798653 - HNE_1356 - hypothetical protein 1340 66.09 +1 1389359..1389706 - 115 114797234 - HNE_1357 - hypothetical protein 1341 65.74 0 1389720..1390256 - 178 114797984 - HNE_1358 - ECF subfamily RNA polymerase sigma factor 1342 58.67 0 1390564..1390713 + 49 114800493 - HNE_1359 - hypothetical protein 1343 60.64 0 1390847..1391560 + 237 114797931 - HNE_1360 - hypothetical protein 1344 60.69 0 1391624..1391941 + 105 114797207 - HNE_1361 - putative lipoprotein 1345 58.33 -1 1392063..1392338 + 91 114797616 - HNE_1362 - hypothetical protein 1346 70.80 +2 1392447..1392833 + 128 114799093 - HNE_1363 - hypothetical protein 1347 65.92 +1 1393000..1394346 + 448 114800402 pmbA HNE_1364 - pmbA protein 1348 64.11 0 1394375..1395469 + 364 114799663 - HNE_1365 - inositol monophosphatase family protein 1349 63.82 0 1395420..1397246 + 608 114797958 - HNE_1366 - efflux ABC transporter, permease/ATP-binding protein 1350 65.02 0 1397251..1397916 - 221 114797219 - HNE_1367 - putative frnE protein 1351 66.58 +1 1397975..1399102 - 375 114799354 ubiA HNE_1368 - 4-hydroxybenzoate polyprenyl transferase 1352 68.87 +1 1399220..1399990 + 256 114800139 - HNE_1369 - hypothetical protein 1353 63.06 0 1400058..1401248 - 396 114797331 - HNE_1370 - major facilitator family transporter 1354 62.22 0 1401263..1402297 - 344 114798006 - HNE_1371 - dimethylsulfoxide reductase chain B 1355 62.68 0 1402384..1403286 + 300 114799792 - HNE_1372 - LysR family transcriptional regulator 1356 61.58 0 1403307..1403837 - 176 114800381 - HNE_1373 - riboflavin biosynthesis protein RibD domain-containing protein 1357 63.76 0 1404174..1405550 + 458 114797614 - HNE_1374 - glutamate--cysteine ligase 1358 62.07 0 1405589..1406263 + 224 114798387 - HNE_1375 - hypothetical protein 1359 61.58 0 1406411..1408435 + 674 114800217 - HNE_1376 - proton/peptide symporter family protein 1360 61.62 0 1408518..1409804 - 428 114797476 - HNE_1377 - small conductance mechanosensitive ion channel (MscS) family protein 1361 64.80 0 1409910..1410446 - 178 114798241 - HNE_1378 - RNA pseudouridine synthase family protein 1362 62.75 0 1410647..1411003 + 118 114799018 panD HNE_1379 - aspartate alpha-decarboxylase 1363 58.66 0 1411034..1411495 - 153 114798946 - HNE_1380 - MerR family transcriptional regulator 1364 57.11 -1 1411500..1412294 + 264 114799712 - HNE_1381 - hypothetical protein 1365 64.78 0 1412331..1413335 - 334 114798770 - HNE_1382 - luciferase family monooxygenase 1366 65.71 0 1413457..1414503 - 348 114799553 - HNE_1383 - hypothetical protein 1367 63.66 0 1414500..1415429 - 309 114797621 lgt HNE_1384 - prolipoprotein diacylglyceryl transferase 1368 64.31 0 1415537..1415791 + 84 114798170 - HNE_1385 - hypothetical protein 1369 62.30 0 1415903..1416406 + 167 114798921 - HNE_1386 - hypothetical protein 1370 67.29 +1 1416416..1417222 + 268 114799869 proC HNE_1387 - pyrroline-5-carboxylate reductase 1371 63.64 0 1417243..1417869 + 208 114797672 - HNE_1388 - hypothetical protein 1372 61.36 0 1417866..1418957 + 363 114799215 - HNE_1389 - hypothetical protein 1373 60.78 0 1419207..1419512 + 101 114798007 - HNE_1390 - hypothetical protein 1374 69.21 +1 1419609..1420277 + 222 114800453 - HNE_1391 - hypothetical protein 1375 69.07 +1 1420274..1421230 + 318 114799668 - HNE_1392 - putative flagellar motor switch protein FliG 1376 66.43 +1 1421230..1421643 + 137 114798466 - HNE_1393 - hypothetical protein 1377 61.48 0 1421640..1421909 + 89 114797692 fliN HNE_1394 - flagellar motor switch protein FliN 1378 59.75 0 1421958..1422839 + 293 114798396 phhA HNE_1395 - phenylalanine 4-monooxygenase 1379 60.42 0 1422836..1423459 - 207 114797549 pth HNE_1396 - peptidyl-tRNA hydrolase 1380 61.06 0 1423542..1424201 - 219 114797515 - HNE_1397 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 1381 65.37 0 1424368..1425291 - 307 114798544 - HNE_1398 - beta-lactamase 1382 63.54 0 1425405..1426397 - 330 114799486 - HNE_1399 - amidohydrolase family protein 1383 59.14 0 1426597..1426875 + 92 114800479 - HNE_1400 - hypothetical protein 1384 63.97 0 1426885..1428666 + 593 114797134 - HNE_1401 - solute/sodium symporter (SSS) family protein 1385 61.68 0 1428780..1430726 + 648 114798116 acsA HNE_1402 - acetate--CoA ligase 1386 65.13 0 1430821..1431798 + 325 114797096 - HNE_1403 - glycosyl transferase, group 2 family protein 1387 64.28 0 1431795..1433429 - 544 114798077 chvG HNE_1404 - sensor histidine kinase ChvG 1388 60.65 0 1433429..1433893 - 154 114798998 - HNE_1405 - putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type 1389 66.46 +1 1434011..1434484 + 157 114797907 - HNE_1406 - hypothetical protein 1390 66.17 +1 1434481..1435080 - 199 114798655 - HNE_1407 - hypothetical protein 1391 60.23 0 1435034..1435810 - 258 114798039 chvI HNE_1408 - DNA-binding response regulator ChvI 1392 65.19 0 1435952..1436968 - 338 114798912 - HNE_1409 - pyridoxal-phosphate-dependent enzyme 1393 48.90 -2 1437501..1438778 + 425 114800194 - HNE_1410 - TonB family protein 1394 63.57 0 1438809..1440650 - 613 114797337 ilvD HNE_1411 - dihydroxy-acid dehydratase 1395 62.26 0 1440776..1443565 - 929 114798581 polA HNE_1412 - DNA polymerase I 1396 63.29 0 1443734..1444207 + 157 114799565 - HNE_1413 - hypothetical protein 1397 61.68 0 1444292..1444732 + 146 114800511 - HNE_1414 - hypothetical protein 1398 64.13 0 1444779..1445804 + 341 114799720 - HNE_1415 - L4BD family NADP-dependent oxidoreductase 1399 62.33 0 1445876..1446244 + 122 114799730 - HNE_1416 - putative lipoprotein 1400 67.57 +1 1446332..1447105 + 257 114798984 - HNE_1417 - putative lipoprotein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0