version 1.0
Hyphomonas neptunium ATCC 15444, complete genome - 1..3705021 3505 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 62 61.24 0 51015..51512 - 165 114798905 - HNE_0062 - YbaK/prolyl-tRNA synthetase domain-containing protein 63 60.00 0 51575..52309 + 244 114798190 - HNE_0063 - hypothetical protein 64 72.73 +2 52373..52735 - 120 114797533 hisE HNE_0064 - phosphoribosyl-ATP diphosphatase 65 63.38 0 52868..53689 + 273 114798522 - HNE_0065 - enoyl-CoA hydratase 66 67.98 +1 53725..54483 - 252 114797557 hisF HNE_0066 - imidazoleglycerol phosphate synthase, cyclase subunit 67 68.75 +1 54635..54826 + 63 114798515 - HNE_0067 - hypothetical protein 68 64.70 0 54933..55694 + 253 114799626 - HNE_0068 - putative diguanylate cyclase 69 50.95 -2 55978..56187 + 69 114799723 - HNE_0069 - hypothetical protein 70 67.77 +1 56214..56939 - 241 114797166 hisA HNE_0070 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 71 67.93 +1 56936..57568 - 210 114798251 hisH HNE_0071 - imidazoleglycerol phosphate synthase, glutamine amidotransferase subunit 72 62.16 0 57668..58975 + 435 114800187 - HNE_0072 - putative transporter 73 60.29 0 58991..59617 - 208 114799970 hisB HNE_0073 - imidazoleglycerol-phosphate dehydratase 74 63.03 0 59697..61481 + 594 114799436 - HNE_0074 - putative diguanylate cyclase 75 63.39 0 61463..61981 - 172 114798620 - HNE_0075 - putative acetyltransferase 76 61.38 0 61978..62412 - 144 114800214 - HNE_0076 - hypothetical protein 77 62.00 0 62417..62845 - 142 114797338 - HNE_0077 - hypothetical protein 78 63.92 0 62935..63990 - 351 114798208 mclA HNE_0078 - malyl-CoA lyase 79 56.22 -1 64086..64286 + 66 114797180 - HNE_0079 - hypothetical protein 80 64.41 0 64291..65220 - 309 114797932 xerD HNE_0080 - tyrosine recombinase XerD 81 62.03 0 65507..66067 + 186 114800012 aroK HNE_0081 - shikimate kinase 82 64.17 0 66064..67185 + 373 114797725 aroB HNE_0082 - 3-dehydroquinate synthase 83 61.33 0 67214..68488 + 424 114798726 - HNE_0083 - CBS/transporter associated domain-containing protein 84 60.99 0 68495..68776 - 93 114799844 - HNE_0084 - BolA family protein 85 66.51 +1 68808..69431 + 207 114797765 - HNE_0085 - DnaJ domain-containing protein 86 59.57 0 69846..70310 + 154 114798718 - HNE_0086 - spore coat family protein 87 63.14 0 70322..71002 + 226 114799312 - HNE_0087 - hypothetical protein 88 63.69 0 71056..73308 + 750 114800318 - HNE_0088 - fimbrial usher protein 89 59.48 0 73309..73767 + 152 114797879 - HNE_0089 - putative lipoprotein 90 62.32 0 73871..74860 + 329 114798702 - HNE_0090 - putative NADH-quinone oxidoreductase 91 64.34 0 74864..75721 - 285 114799349 - HNE_0091 - putative undecaprenol kinase 92 61.96 0 75961..77406 + 481 114800319 gltD HNE_0092 - putative oxidoreductase 93 61.05 0 77412..81953 + 1513 114798288 gltB HNE_0093 - glutamate synthase, large subunit 94 61.15 0 82002..82889 - 295 114798674 - HNE_0094 - putative lipoprotein 95 58.33 -1 83174..84337 + 387 114799939 - HNE_0095 - aminotransferase, classes I and II 96 60.85 0 84385..85932 - 515 114797697 - HNE_0096 - carboxyl transferase domain-containing protein 97 58.82 0 86041..86346 + 101 114797960 - HNE_0097 - SCP-2 sterol transfer family protein 98 60.17 0 86433..87386 + 317 114799139 - HNE_0098 - alpha/beta fold family hydrolase 99 60.77 0 87421..88878 + 485 114797267 baiB HNE_0099 - bile acid-coenzyme A ligase 100 62.09 0 88934..89938 + 334 114797977 - HNE_0100 - alcohol dehydrogenase, class III 101 58.20 -1 89975..91498 - 507 114798776 - HNE_0101 - amino acid carrier protein 102 59.35 0 91544..91666 - 40 114799575 - HNE_0102 - hypothetical protein 103 61.11 0 91688..93037 + 449 114799640 - HNE_0103 - tRNA-i(6)A37 thiotransferase enzyme MiaB 104 62.33 0 93076..94020 + 314 114800486 - HNE_0104 - PhoH family protein 105 55.19 -1 94031..94483 + 150 114798379 - HNE_0105 - hypothetical protein 106 61.44 0 94489..95349 + 286 114798310 - HNE_0106 - CBS/transporter associated domain-containing protein 107 61.44 0 95356..96999 + 547 114800455 lnt HNE_0107 - apolipoprotein N-acyltransferase 108 57.53 -1 97041..97478 + 145 114799525 - HNE_0108 - DNA-binding protein 109 61.36 0 97510..98169 + 219 114798099 trmB HNE_0109 - tRNA (guanine-N(7))-methyltransferase 110 52.38 -2 98355..98564 + 69 114797127 - HNE_0110 - cold shock DNA-binding protein 111 61.83 0 98773..99372 + 199 114800120 - HNE_0111 - hypothetical protein 112 61.10 0 99369..101147 + 592 114799070 nusA HNE_0112 - transcription termination factor NusA 113 61.57 0 101122..101808 + 228 114798650 - HNE_0113 - hypothetical protein 114 62.72 0 101864..104425 + 853 114797688 infB HNE_0114 - translation initiation factor IF-2 115 62.75 0 104435..104842 + 135 114799473 rbfA HNE_0115 - ribosome-binding factor A 116 62.01 0 105005..105562 + 185 114800142 - HNE_0116 - hypothetical protein 117 64.54 0 105695..106636 + 313 114799976 truB HNE_0117 - tRNA pseudouridine synthase B 118 66.67 +1 106637..106873 - 78 114797236 - HNE_0118 - hypothetical protein 119 61.86 0 107521..108228 - 235 114797682 - HNE_0119 - putative lipoprotein 120 62.28 0 108400..108900 + 166 114800218 msrB1 HNE_0120 - methionine-R-sulfoxide reductase 121 67.94 +1 108966..109358 - 130 114798277 - HNE_0121 - hypothetical protein 122 61.90 0 109355..109690 - 111 114797689 - HNE_0122 - hypothetical protein 123 64.47 0 109703..110338 - 211 114797302 - HNE_0123 - hypothetical protein 124 69.89 +2 110388..110759 - 123 114798871 - HNE_0124 - hypothetical protein 125 61.94 0 110804..111586 - 260 114797825 bdhA HNE_0125 - 3-hydroxybutyrate dehydrogenase 126 61.38 0 111682..112116 + 144 114800450 - HNE_0126 - hypothetical protein 127 66.24 +1 112243..112947 + 234 114799432 - HNE_0127 - hypothetical protein 128 66.67 +1 112944..113813 + 289 114799810 pyrF HNE_0128 - orotidine 5'-phosphate decarboxylase 129 63.93 0 113966..116119 + 717 114797244 adhA HNE_0129 - alcohol dehydrogenase (acceptor) 130 65.00 0 116258..116797 + 179 114798229 - HNE_0130 - hypothetical protein 131 59.39 0 116868..117692 + 274 114797508 - HNE_0131 - hypothetical protein 132 62.34 0 117676..118368 - 230 114800131 - HNE_0132 - glutathione S-transferase 133 65.99 +1 118365..118661 - 98 114797485 - HNE_0133 - hypothetical protein 134 56.92 -1 118811..119518 + 235 114798071 - HNE_0134 - TetR family transcriptional regulator 135 64.67 0 119583..119732 + 49 114799071 - HNE_0135 - hypothetical protein 136 68.49 +1 119883..120980 - 365 114797789 gcp HNE_0136 - O-sialoglycoprotein endopeptidase 137 68.02 +1 121016..121756 - 246 114798778 - HNE_0137 - YceI family protein 138 58.80 0 122241..122672 + 143 114799309 - HNE_0138 - hypothetical protein 139 61.43 0 122692..124506 - 604 114800355 lepA HNE_0139 - GTP-binding protein LepA 140 60.80 0 124623..125474 + 283 114797303 - HNE_0140 - hypothetical protein 141 62.58 0 125443..126273 + 276 114798287 - HNE_0141 - hypothetical protein 142 64.58 0 126362..126937 + 191 114800011 - HNE_0142 - putative lipoprotein 143 61.93 0 126950..128047 + 365 114798450 - HNE_0143 - Rieske 2Fe-2S family protein 144 61.20 0 128185..128769 + 194 114797636 - HNE_0144 - fasciclin domain-containing protein 145 67.26 +1 128909..129412 + 167 114799962 ruvC HNE_0145 - crossover junction endodeoxyribonuclease RuvC 146 65.38 0 129409..130032 + 207 114798884 ruvA HNE_0146 - Holliday junction DNA helicase RuvA 147 66.47 +1 130029..131063 + 344 114800414 ruvB HNE_0147 - Holliday junction DNA helicase B 148 68.42 +1 131064..131462 - 132 114799614 - HNE_0148 - hypothetical protein 149 62.83 0 131539..132684 + 381 114797615 - HNE_0149 - hypothetical protein 150 58.99 0 132681..133136 + 151 114797377 - HNE_0150 - thioesterase family protein 151 62.73 0 133454..134164 + 236 114799599 tolQ HNE_0151 - protein TolQ 152 62.89 0 134177..134626 + 149 114799773 - HNE_0152 - ExbD/TolR family transport energizing protein 153 62.66 0 134652..135575 + 307 114798960 - HNE_0153 - hypothetical protein 154 63.05 0 135616..136971 + 451 114798605 tolB HNE_0154 - tolB protein 155 61.88 0 137204..137746 + 180 114797840 - HNE_0155 - ompA family protein 156 66.25 +1 137861..138817 + 318 114800143 - HNE_0156 - hypothetical protein 157 65.49 0 138805..139908 + 367 114799417 tilS HNE_0157 - tRNA(Ile)-lysidine synthetase 158 61.25 0 139957..141876 + 639 114797326 ftsH HNE_0158 - ATP-dependent metalloprotease FtsH 159 61.80 0 141950..142606 + 218 114800066 - HNE_0159 - hypothetical protein 160 61.21 0 142647..142976 + 109 114797110 - HNE_0160 - hypothetical protein 161 59.82 0 143079..143837 + 252 114799876 - HNE_0161 - hypothetical protein 62.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.