version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 788 41.32 0 875876..877477 - 533 208434764 - HPG27_809 - ABC transporter, ATP-binding protein 789 42.23 0 877675..878652 + 325 208434765 - HPG27_810 - guanosine 5'-monophosphate oxido reductase 790 40.74 0 878808..879374 - 188 208434766 - HPG27_811 - phosphoheptose isomerase 791 41.88 0 879379..880770 - 463 208434767 - HPG27_812 - ADP-heptose synthase 792 38.47 0 880767..881759 - 330 208434768 - HPG27_813 - ADP-L-glycero-D-mannoheptose-6-epimerase 793 35.94 0 881768..882265 - 165 208434769 - HPG27_814 - hypothetical protein 794 40.66 0 882279..883001 - 240 208434770 - HPG27_815 - hypothetical protein 795 39.14 0 883010..883681 - 223 208434771 - HPG27_816 - hypothetical protein 796 37.65 0 883686..885353 - 555 208434772 - HPG27_817 - hypothetical protein 797 35.46 0 885358..886014 - 218 208434773 - HPG27_818 - hypothetical protein 798 43.61 +1 886011..886370 - 119 208434774 - HPG27_819 - deoxyuridine5'-triphosphate nucleotidohydrolase 799 39.19 0 886438..886932 - 164 208434775 greA HPG27_820 - transcription elongation factor 800 38.41 0 886973..888055 - 360 208434776 - HPG27_821 - lipid A disaccharide synthetase 801 34.63 -1 888055..888516 - 153 208434777 - HPG27_822 - hypothetical protein 802 38.98 0 888523..888876 - 117 208434778 - HPG27_823 - hydrogenase and urease maturation protein 803 45.67 +1 888935..891091 - 718 208434779 flgE-1 HPG27_824 - flagellar hook protein 804 42.04 0 891300..892034 - 244 208434780 - HPG27_825 - CDP-diglyceride hydrolase 805 36.36 0 892387..892716 + 109 208434781 - HPG27_826 - alkylphosphonate uptake protein 806 35.65 0 892768..892983 - 71 208434782 - HPG27_827 - hypothetical protein 807 40.64 0 893068..893943 - 291 208434783 - HPG27_828 - hypothetical protein 808 42.03 0 894088..895605 - 505 208434784 - HPG27_829 - catalase 809 43.73 +1 895928..898303 + 791 208434785 - HPG27_830 - iron-regulated outer membrane protein 810 43.04 +1 898304..898777 - 157 208434786 - HPG27_831 - Holliday junction endodeoxyribonuclease 811 38.29 0 898909..899634 + 241 208434787 - HPG27_832 - hypothetical protein 812 40.21 0 899788..899976 - 62 208434788 - HPG27_833 - hypothetical protein 813 32.83 -1 900121..900318 - 65 208434789 - HPG27_834 - hypothetical protein 814 36.67 0 900465..900614 - 49 208434790 - HPG27_835 - hypothetical protein 815 40.76 0 900797..901348 - 183 208434791 - HPG27_836 - Holliday junction DNA helicase 816 37.18 0 901374..903218 - 614 208434792 - HPG27_837 - hypothetical protein 817 37.92 0 903311..904771 + 486 208434793 mviN HPG27_838 - virulence factor mviN protein 818 39.91 0 904772..906169 + 465 208434794 - HPG27_839 - cysteinyl-tRNA synthetase 819 42.57 0 906393..910277 + 1294 208434795 vacA HPG27_840 - vacuolating cytotoxin A 820 39.45 0 910336..911103 - 255 208434796 - HPG27_841 - iron (III) dicitrate ABC transporter, ATP-binding protein 821 47.15 +2 911103..912050 - 315 208434797 - HPG27_842 - iron (III) dicitrate ABC transporter, permease protein 822 43.04 +1 912076..912930 - 284 208434798 - HPG27_843 - short-chain oxidoreductase 823 40.80 0 913019..913594 + 191 208434799 - HPG27_844 - acyl coenzyme A thioesterase 824 39.22 0 913732..913884 - 50 208434800 - HPG27_845 - hypothetical protein 825 33.01 -1 913958..914269 - 103 208434801 - HPG27_846 - hypothetical protein 826 36.51 0 914347..914535 - 62 208434802 - HPG27_847 - hypothetical protein 827 33.87 -1 914600..914971 - 123 208434803 - HPG27_848 - hypothetical protein 828 44.49 +1 915374..917596 - 740 208434805 hopU HPG27_849 - outer membrane protein 829 24.64 -2 917595..917801 + 68 208434804 - HPG27_850 - hypothetical protein 830 38.12 0 918088..918609 + 173 208434806 - HPG27_851 - hypothetical protein 831 44.38 +1 918560..919672 - 370 208434807 hypD HPG27_852 - hydrogenase expression/formation protein 832 41.88 0 919678..919911 - 77 208434808 hypC HPG27_853 - hydrogenase expression/formation protein 833 40.19 0 919911..920639 - 242 208434809 hypB HPG27_854 - hydrogenase expression/formation protein 834 41.33 0 920885..921184 - 99 208434810 - HPG27_855 - hypothetical protein 835 40.52 0 922356..923900 + 514 208434811 - HPG27_857 - hypothetical protein 836 40.27 0 923951..924901 + 316 208434812 flgD HPG27_858 - hook assembly protein, flagella 837 42.68 0 924898..926715 + 605 208434813 flgE-2 HPG27_859 - flagellar hook protein 838 32.99 -1 926767..927354 + 195 208434814 - HPG27_860 - restriction endonuclease 839 36.65 0 927364..928509 + 381 208434815 - HPG27_861 - adenine specific DNA methyltransferase 840 39.69 0 928518..930545 + 675 208434816 - HPG27_862 - rephelicase, single-stranded DNA-dependent ATPase 841 45.82 +1 931085..932638 + 517 208434817 hopC HPG27_863 - outer membrane protein 842 43.59 +1 932660..934258 + 532 208434818 hopB HPG27_864 - outer membrane protein 843 39.93 0 935039..936661 - 540 208434819 hopG-2 HPG27_865 - outer membrane protein 844 42.28 0 936831..939266 - 811 208434820 - HPG27_866 - iron-regulated outer membrane protein 845 39.35 0 939443..939874 - 143 208434821 - HPG27_867 - hypothetical protein 846 41.90 0 939879..943136 - 1085 208434822 - HPG27_868 - carbamoyl-phosphate synthase 847 40.84 0 943237..943929 - 230 208434823 - HPG27_869 - hypothetical protein 848 41.04 0 944074..945072 + 332 208434824 gapA HPG27_870 - glyceraldehyde-3-phosphate dehydrogenase 849 38.41 0 945152..952672 + 2506 208434825 - HPG27_871 - vacuolating cytotoxin (VacA)-like protein 850 36.78 0 952724..953827 + 367 208434826 hopK-2 HPG27_872 - outer membrane protein 851 39.13 0 953894..954100 - 68 208434827 - HPG27_873 - 4-oxalocrotonate tautomerase 852 36.94 0 954241..954822 + 193 208434828 recR HPG27_874 - recombinational DNA repair protein 853 35.08 -1 954819..955964 + 381 208434829 - HPG27_875 - hypothetical protein 854 39.26 0 956041..956883 + 280 208434830 - HPG27_876 - heat shock protein 855 37.75 0 956884..957426 + 180 208434831 - HPG27_877 - GTP cyclohydrolase I 856 37.17 0 957442..958353 + 303 208434832 - HPG27_878 - geranyltrans transferase 857 41.79 0 958350..959153 + 267 208434833 - HPG27_879 - stationary-phase survival protein 858 40.45 0 959150..959809 + 219 208434834 - HPG27_880 - hypothetical protein 859 39.14 0 959813..960415 + 200 208434835 - HPG27_881 - hypothetical protein 860 36.77 0 960412..961167 + 251 208434836 - HPG27_882 - hypothetical protein 861 41.98 0 961178..961663 + 161 208434837 - HPG27_883 - hypothetical protein 862 33.33 -1 961753..961995 + 80 208434838 - HPG27_884 - putative outer membrane protein 863 39.30 0 962157..963497 - 446 208434839 - HPG27_885 - proline and betaine transporter 864 31.84 -1 963787..964053 - 88 208434840 - HPG27_886 - hypothetical protein 865 33.92 -1 964118..965488 - 456 208434841 - HPG27_887 - hypothetical protein 866 41.74 0 965552..966241 - 229 208434842 - HPG27_888 - amino acid ABC transporter, permease protein 867 40.03 0 966249..967025 - 258 208434843 - HPG27_889 - amino acid ABC transporter, periplasmic binding protein 868 39.68 0 967096..968229 - 377 208434844 - HPG27_890 - alanine racemase, biosynthetic 869 43.39 +1 968236..969588 - 450 208434845 - HPG27_891 - D-alanine glycine permease 870 40.55 0 969629..970861 - 410 208434846 - HPG27_892 - D-amino acid dehydrogenase 871 40.48 0 970884..971261 - 125 208434847 - HPG27_893 - translation initiation inhibitor 872 41.42 0 972241..973674 + 477 208434848 - HPG27_894 - hypothetical protein 873 38.57 0 974001..974363 + 120 208434849 - HPG27_895 - hypothetical protein 874 35.80 0 976591..977604 - 337 208434850 - HPG27_896 - hypothetical protein 875 36.84 0 977614..978069 - 151 208434851 - HPG27_897 - conserved hypothetical secreted protein 876 42.87 0 978080..978949 - 289 208434852 - HPG27_898 - acetyl-CoA carboxylase beta subunit 877 38.37 0 979030..979644 + 204 208434853 - HPG27_899 - hypothetical protein 878 39.42 0 979655..980311 + 218 208434854 - HPG27_900 - hypothetical protein 879 39.51 0 980314..980880 - 188 208434855 - HPG27_901 - hypothetical protein 880 39.65 0 980945..981577 - 210 208434856 - HPG27_902 - oxygen-insensitive NADPH nitroreductase 881 39.88 0 981574..982428 - 284 208434857 - HPG27_903 - prolipoprotein diacylglyceryl transferase 882 38.27 0 982438..983166 - 242 208434858 - HPG27_904 - ribosomal large subunit pseudouridine synthase C 883 38.92 0 983178..984359 - 393 208434859 - HPG27_905 - 3-deoxy-D-manno-octulosonic-acid transferase 884 36.52 0 984360..985112 - 250 208434860 - HPG27_906 - hypothetical protein 885 38.80 0 985122..985853 - 243 208434861 - HPG27_907 - hypothetical protein 886 42.36 0 985855..986751 - 298 208434862 - HPG27_908 - glycyl-tRNA synthetase, alpha subunit 887 44.21 +1 986765..987739 - 324 208434863 - HPG27_909 - glycerol-3-phosphate dehydrogenase, NAD(P)+ dependent 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0