version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 754 35.49 0 839786..840295 - 169 208434730 - HPG27_775 - hypothetical protein 755 33.21 -1 840352..841170 - 272 208434731 - HPG27_776 - DNA methylase 756 39.95 0 841421..843082 + 553 208434732 - HPG27_777 - osmo protection protein 757 38.47 0 843086..843727 + 213 208434733 - HPG27_778 - osmoprotection protein 758 35.06 -1 843910..844371 + 153 208434734 - HPG27_779 - hypothetical protein 759 37.87 0 844372..846156 + 594 208434735 - HPG27_780 - excinuclease ABC subunit C 760 40.28 0 846167..847432 + 421 208434736 uvrC HPG27_781 - excinuclease ABC subunit C 761 35.07 -1 847433..847777 + 114 208434737 - HPG27_782 - hypothetical protein 762 39.56 0 847866..848186 + 106 208434738 trxA HPG27_783 - thioredoxin 763 43.70 +1 848192..849127 + 311 208434739 trxB HPG27_784 - thioredoxin reductase 764 37.96 0 849336..850157 + 273 208434740 - HPG27_785 - beta-1,4-galactosyl transferase 765 36.95 0 850380..850628 - 82 208434741 - HPG27_786 - RNA binding protein 766 41.85 0 850949..851629 - 226 208434742 - HPG27_787 - ATP synthase F0, subunit a 767 44.74 +1 851751..853196 - 481 208434743 - HPG27_788 - inosine-5'-monophosphate dehydrogenase 768 43.83 +1 853206..854567 - 453 208434744 - HPG27_789 - Glu-tRNA amido transferase, subunit A 769 38.07 0 854626..855216 - 196 208434745 - HPG27_790 - dephospho-CoA kinase 770 36.50 0 855218..856006 - 262 208434746 - HPG27_791 - spermidine synthase 771 35.27 -1 856098..856976 - 292 208434747 - HPG27_792 - hypothetical protein 772 40.49 0 857053..858435 + 460 208434748 - HPG27_793 - GTP-binding protein-like protein 773 40.70 0 858578..858862 + 94 208434749 - HPG27_794 - DNA-binding protein HU 774 47.06 +2 859455..860066 + 203 208434750 - HPG27_795 - hypothetical protein 775 37.38 0 860086..860703 + 205 208434751 - HPG27_796 - hypothetical protein 776 44.39 +1 860700..862463 + 587 208434752 - HPG27_797 - outer membrane protein P1 777 43.61 +1 862467..863468 + 333 208434753 - HPG27_798 - UDP-GlcNAcC6de hydratase 778 39.59 0 863465..864742 + 425 208434754 - HPG27_799 - pantothenate metabolism flavoprotein 779 37.53 0 864742..865479 + 245 208434755 - HPG27_800 - hypothetical protein 780 41.98 0 865511..866146 - 211 208434756 - HPG27_801 - thiamine phosphate pyrophosphorylase 781 42.96 +1 866166..866975 - 269 208434757 - HPG27_802 - thiamine biosynthesis protein 782 43.42 +1 866972..867754 - 260 208434758 - HPG27_803 - thiamine phosphate pyrophosphorylase 783 37.65 0 867840..870830 - 996 208434759 - HPG27_804 - type I restriction enzyme R protein 784 34.73 -1 870967..872256 - 429 208434760 - HPG27_805 - HP0790-like protein 785 40.79 0 872266..873861 - 531 208434761 - HPG27_806 - type I restriction enzyme M protein 786 41.67 0 874035..874718 + 227 208434762 - HPG27_807 - hypothetical protein 787 38.48 0 874947..875879 - 310 208434763 - HPG27_808 - hypothetical protein 788 41.32 0 875876..877477 - 533 208434764 - HPG27_809 - ABC transporter, ATP-binding protein 789 42.23 0 877675..878652 + 325 208434765 - HPG27_810 - guanosine 5'-monophosphate oxido reductase 790 40.74 0 878808..879374 - 188 208434766 - HPG27_811 - phosphoheptose isomerase 791 41.88 0 879379..880770 - 463 208434767 - HPG27_812 - ADP-heptose synthase 792 38.47 0 880767..881759 - 330 208434768 - HPG27_813 - ADP-L-glycero-D-mannoheptose-6-epimerase 793 35.94 0 881768..882265 - 165 208434769 - HPG27_814 - hypothetical protein 794 40.66 0 882279..883001 - 240 208434770 - HPG27_815 - hypothetical protein 795 39.14 0 883010..883681 - 223 208434771 - HPG27_816 - hypothetical protein 796 37.65 0 883686..885353 - 555 208434772 - HPG27_817 - hypothetical protein 797 35.46 0 885358..886014 - 218 208434773 - HPG27_818 - hypothetical protein 798 43.61 +1 886011..886370 - 119 208434774 - HPG27_819 - deoxyuridine5'-triphosphate nucleotidohydrolase 799 39.19 0 886438..886932 - 164 208434775 greA HPG27_820 - transcription elongation factor 800 38.41 0 886973..888055 - 360 208434776 - HPG27_821 - lipid A disaccharide synthetase 801 34.63 -1 888055..888516 - 153 208434777 - HPG27_822 - hypothetical protein 802 38.98 0 888523..888876 - 117 208434778 - HPG27_823 - hydrogenase and urease maturation protein 803 45.67 +1 888935..891091 - 718 208434779 flgE-1 HPG27_824 - flagellar hook protein 804 42.04 0 891300..892034 - 244 208434780 - HPG27_825 - CDP-diglyceride hydrolase 805 36.36 0 892387..892716 + 109 208434781 - HPG27_826 - alkylphosphonate uptake protein 806 35.65 0 892768..892983 - 71 208434782 - HPG27_827 - hypothetical protein 807 40.64 0 893068..893943 - 291 208434783 - HPG27_828 - hypothetical protein 808 42.03 0 894088..895605 - 505 208434784 - HPG27_829 - catalase 809 43.73 +1 895928..898303 + 791 208434785 - HPG27_830 - iron-regulated outer membrane protein 810 43.04 +1 898304..898777 - 157 208434786 - HPG27_831 - Holliday junction endodeoxyribonuclease 811 38.29 0 898909..899634 + 241 208434787 - HPG27_832 - hypothetical protein 812 40.21 0 899788..899976 - 62 208434788 - HPG27_833 - hypothetical protein 813 32.83 -1 900121..900318 - 65 208434789 - HPG27_834 - hypothetical protein 814 36.67 0 900465..900614 - 49 208434790 - HPG27_835 - hypothetical protein 815 40.76 0 900797..901348 - 183 208434791 - HPG27_836 - Holliday junction DNA helicase 816 37.18 0 901374..903218 - 614 208434792 - HPG27_837 - hypothetical protein 817 37.92 0 903311..904771 + 486 208434793 mviN HPG27_838 - virulence factor mviN protein 818 39.91 0 904772..906169 + 465 208434794 - HPG27_839 - cysteinyl-tRNA synthetase 819 42.57 0 906393..910277 + 1294 208434795 vacA HPG27_840 - vacuolating cytotoxin A 820 39.45 0 910336..911103 - 255 208434796 - HPG27_841 - iron (III) dicitrate ABC transporter, ATP-binding protein 821 47.15 +2 911103..912050 - 315 208434797 - HPG27_842 - iron (III) dicitrate ABC transporter, permease protein 822 43.04 +1 912076..912930 - 284 208434798 - HPG27_843 - short-chain oxidoreductase 823 40.80 0 913019..913594 + 191 208434799 - HPG27_844 - acyl coenzyme A thioesterase 824 39.22 0 913732..913884 - 50 208434800 - HPG27_845 - hypothetical protein 825 33.01 -1 913958..914269 - 103 208434801 - HPG27_846 - hypothetical protein 826 36.51 0 914347..914535 - 62 208434802 - HPG27_847 - hypothetical protein 827 33.87 -1 914600..914971 - 123 208434803 - HPG27_848 - hypothetical protein 828 44.49 +1 915374..917596 - 740 208434805 hopU HPG27_849 - outer membrane protein 829 24.64 -2 917595..917801 + 68 208434804 - HPG27_850 - hypothetical protein 830 38.12 0 918088..918609 + 173 208434806 - HPG27_851 - hypothetical protein 831 44.38 +1 918560..919672 - 370 208434807 hypD HPG27_852 - hydrogenase expression/formation protein 832 41.88 0 919678..919911 - 77 208434808 hypC HPG27_853 - hydrogenase expression/formation protein 833 40.19 0 919911..920639 - 242 208434809 hypB HPG27_854 - hydrogenase expression/formation protein 834 41.33 0 920885..921184 - 99 208434810 - HPG27_855 - hypothetical protein 835 40.52 0 922356..923900 + 514 208434811 - HPG27_857 - hypothetical protein 836 40.27 0 923951..924901 + 316 208434812 flgD HPG27_858 - hook assembly protein, flagella 837 42.68 0 924898..926715 + 605 208434813 flgE-2 HPG27_859 - flagellar hook protein 838 32.99 -1 926767..927354 + 195 208434814 - HPG27_860 - restriction endonuclease 839 36.65 0 927364..928509 + 381 208434815 - HPG27_861 - adenine specific DNA methyltransferase 840 39.69 0 928518..930545 + 675 208434816 - HPG27_862 - rephelicase, single-stranded DNA-dependent ATPase 841 45.82 +1 931085..932638 + 517 208434817 hopC HPG27_863 - outer membrane protein 842 43.59 +1 932660..934258 + 532 208434818 hopB HPG27_864 - outer membrane protein 843 39.93 0 935039..936661 - 540 208434819 hopG-2 HPG27_865 - outer membrane protein 844 42.28 0 936831..939266 - 811 208434820 - HPG27_866 - iron-regulated outer membrane protein 845 39.35 0 939443..939874 - 143 208434821 - HPG27_867 - hypothetical protein 846 41.90 0 939879..943136 - 1085 208434822 - HPG27_868 - carbamoyl-phosphate synthase 847 40.84 0 943237..943929 - 230 208434823 - HPG27_869 - hypothetical protein 848 41.04 0 944074..945072 + 332 208434824 gapA HPG27_870 - glyceraldehyde-3-phosphate dehydrogenase 849 38.41 0 945152..952672 + 2506 208434825 - HPG27_871 - vacuolating cytotoxin (VacA)-like protein 850 36.78 0 952724..953827 + 367 208434826 hopK-2 HPG27_872 - outer membrane protein 851 39.13 0 953894..954100 - 68 208434827 - HPG27_873 - 4-oxalocrotonate tautomerase 852 36.94 0 954241..954822 + 193 208434828 recR HPG27_874 - recombinational DNA repair protein 853 35.08 -1 954819..955964 + 381 208434829 - HPG27_875 - hypothetical protein 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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