version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 575 45.30 +1 645428..646012 - 194 208434551 - HPG27_591 - modulator of drug activity 576 46.49 +1 646172..647326 + 384 208434552 hydA HPG27_592 - quinone-reactive Ni/Fe hydrogenase 577 42.72 0 647336..649072 + 578 208434553 hydB HPG27_593 - quinone-reactive Ni/Fe hydrogenase 578 40.44 0 649085..649759 + 224 208434554 hydC HPG27_594 - quinone-reactive Ni/Fe hydrogenase 579 42.83 0 649756..650292 + 178 208434555 hydD HPG27_595 - quinone-reactive Ni/Fe hydrogenase 580 37.56 0 650294..651832 + 512 208434556 hydE HPG27_596 - hypothetical protein 581 33.33 -1 651837..652193 - 118 208434557 - HPG27_597 - hypothetical protein 582 42.38 0 652268..652720 - 150 208434558 - HPG27_598 - hypothetical protein 583 38.20 0 652914..653837 + 307 208434559 hopH HPG27_599 - outer membrane protein 584 39.35 0 653883..654563 - 226 208434560 - HPG27_600 - ExsB trans-regulatory protein 585 35.57 0 654626..655834 + 402 208434561 - HPG27_601 - poly(A) polymerase 586 39.68 0 655848..656351 + 167 208434562 - HPG27_602 - hypothetical protein 587 41.72 0 656366..657223 + 285 208434563 - HPG27_603 - putative 3-hydroxy acid dehydrogenase 588 41.07 0 657244..657876 + 210 208434564 - HPG27_604 - NAD(P)H-flavinoxido reductase 589 37.12 0 658041..659360 + 439 208434565 - HPG27_605 - glutamyl-tRNA synthetase 590 40.14 0 659357..659650 + 97 208434566 - HPG27_606 - hypothetical protein 591 37.85 0 659664..661346 + 560 208434567 - HPG27_607 - soluble lytic murein transglycosylase 592 41.97 0 661343..662164 + 273 208434568 - HPG27_608 - UDP-glucosepyrophosphorylase 593 35.54 0 662176..662583 + 135 208434569 - HPG27_609 - hypothetical protein 594 44.52 +1 662586..663854 + 422 208434570 - HPG27_610 - UDP-N-acetylglucosamine enolpyruvyl transferase 595 43.07 +1 663912..665318 + 468 208434571 - HPG27_611 - aspartate ammonia-lyase 596 40.44 0 665363..665953 + 196 208434572 - HPG27_612 - hypothetical protein 597 36.72 0 665962..667350 - 462 208434573 - HPG27_613 - alpha1,3-fucosyl transferase 598 42.31 0 667389..668012 - 207 208434574 - HPG27_614 - phospho serine phosphatase 599 38.49 0 668028..668531 - 167 208434575 - HPG27_615 - non heme iron-containing ferritin 600 38.60 0 668828..669910 + 360 208434576 - HPG27_616 - hypothetical protein 601 43.25 +1 670032..672743 + 903 208434577 - HPG27_617 - protective surface antigen D15 602 40.87 0 672745..673806 + 353 208434578 - HPG27_618 - hypothetical protein 603 38.01 0 673812..675116 + 434 208434579 - HPG27_619 - processing protease 604 41.82 0 675116..676540 + 474 208434580 - HPG27_620 - Glu-tRNA(Gln) amido transferase subunit B 605 39.42 0 676540..677787 + 415 208434581 - HPG27_621 - hypothetical protein 606 34.61 -1 677799..678815 + 338 208434582 - HPG27_622 - hypothetical protein 607 40.40 0 678937..679233 + 98 208434583 - HPG27_623 - ribonuclease H 608 40.00 0 679245..679964 + 239 208434584 - HPG27_624 - ribonuclease III 609 42.17 0 679961..681058 + 365 208434585 - HPG27_625 - chorismate synthase 610 33.91 -1 681096..681611 + 171 208434586 - HPG27_626 - hypothetical protein 611 39.81 0 681611..682984 + 457 208434587 - HPG27_627 - oxygen-independent coproporphyrinogen III oxidase 612 39.17 0 682981..684282 + 433 208434588 - HPG27_628 - glycerol-3-phosphate dehydrogenase 613 39.83 0 686461..689124 + 887 208434589 - HPG27_630 - hypothetical protein 614 42.56 0 689366..690178 + 270 208434590 horF HPG27_631 - outer membrane protein 615 43.05 +1 690337..691509 + 390 208434591 - HPG27_632 - aspartate amino transferase 616 31.52 -2 691653..691982 + 109 208434592 - HPG27_633 - hypothetical protein 617 38.10 0 691989..693080 + 363 208434593 - HPG27_634 - integrase-recombinase protein 618 36.69 0 693142..693648 - 168 208434594 - HPG27_635 - methylated-DNA--protein-cysteine methyl transferase 619 38.02 0 693652..694419 - 255 208434595 - HPG27_636 - hypothetical protein 620 40.19 0 694532..695479 - 315 208434596 - HPG27_637 - putative lipopolysaccharide biosynthesis protein 621 40.90 0 695541..697907 - 788 208434597 - HPG27_638 - ribonucleoside-diphosphatereductase 1 alpha subunit 622 42.46 0 698100..698570 - 156 208434598 - HPG27_639 - hypothetical protein 623 48.96 +2 698594..698881 - 95 208434599 - HPG27_640 - hypothetical protein 624 41.37 0 699152..700483 - 443 208434600 glmU HPG27_641 - UDP-N-acetylglucosamine pyrophosphorylase 625 37.68 0 700499..701281 + 260 208434601 fliP HPG27_642 - flagellar biosynthetic protein 626 39.67 0 701320..703623 - 767 208434602 fecA HPG27_643 - iron (III) dicitrate transport protein 627 39.64 0 703884..705818 - 644 208434603 feoB HPG27_644 - iron (II) transport protein 628 36.90 0 705951..706763 + 270 208434604 - HPG27_645 - hypothetical protein 629 45.49 +1 707044..708219 + 391 208434605 - HPG27_646 - acetyl coenzyme A acetyltransferase 630 42.92 +1 708230..708928 + 232 208434606 - HPG27_647 - succinyl-CoA-transferase subunit A 631 44.87 +1 708925..709548 + 207 208434607 - HPG27_648 - succinyl-CoA-transferase subunit B 632 41.83 0 709568..710932 + 454 208434608 - HPG27_649 - short-chain fatty acids transporter 633 40.06 0 711060..712070 + 336 208434609 - HPG27_650 - putative outer membrane protein 634 43.65 +1 714441..716738 + 765 208434610 - HPG27_652 - N-methyl hydantoinase 635 41.52 0 716755..717255 + 166 208434611 - HPG27_653 - acetone carboxylase, gamma subunit 636 31.25 -2 717454..717645 + 63 208434612 - HPG27_654 - hypothetical protein 637 36.64 0 717657..718685 + 342 208434613 - HPG27_655 - hypothetical protein 638 41.38 0 718804..719064 + 86 208434614 - HPG27_656 - diacyl glycerol kinase 639 41.41 0 719084..721585 + 833 208434615 gyrA HPG27_657 - DNA gyrase subunit A 640 39.72 0 721636..722058 + 140 208434616 - HPG27_658 - hypothetical protein 641 40.66 0 722055..723200 + 381 208434617 - HPG27_659 - transcriptional activator of flagella proteins 642 34.08 -1 723373..723639 + 88 208434618 - HPG27_660 - hypothetical protein 643 39.84 0 723733..724116 + 127 208434619 - HPG27_661 - hypothetical protein 644 41.24 0 727514..728335 + 273 208434620 hopE HPG27_663 - outer membrane protein 645 39.16 0 728515..729441 + 308 208434621 - HPG27_664 - hypothetical protein 646 32.17 -1 729462..729806 + 114 208434622 - HPG27_665 - hypothetical protein 647 42.86 0 730009..730911 + 300 208434623 - HPG27_666 - hypothetical protein 648 38.90 0 733359..734579 + 406 208434624 - HPG27_668 - hypothetical protein 649 35.57 0 734658..735284 + 208 208434625 - HPG27_669 - hypothetical protein 650 36.06 0 735296..736540 - 414 208434626 rpoN HPG27_670 - RNA polymerase sigma-54 factor 651 42.05 0 736543..737265 - 240 208434627 - HPG27_671 - ABC transporter. ATP-binding protein 652 39.30 0 737278..737679 - 133 208434628 - HPG27_672 - hypothetical protein 653 38.86 0 739467..740099 - 210 208434629 - HPG27_674 - hypothetical protein 654 40.53 0 740304..740789 + 161 208434630 - HPG27_675 - hypothetical protein 655 40.26 0 740818..741279 + 153 208434631 - HPG27_676 - hypothetical protein 656 40.32 0 741597..743513 + 638 208434632 sabB HPG27_677 - outer membrane protein 657 44.52 +1 743589..744920 - 443 208434633 - HPG27_678 - anaerobic C4-dicarboxylate transport protein 658 46.06 +1 744997..746049 + 350 208434634 - HPG27_679 - L-asparaginaseII 659 41.51 0 746189..748144 - 651 208434635 sabA HPG27_680 - outer membrane protein 660 40.62 0 748365..749228 - 287 208434636 - HPG27_681 - outer membrane protein 661 41.44 0 749252..750238 - 328 208434637 - HPG27_682 - transcriptional regulator 662 35.99 0 750329..751345 - 338 208434638 - HPG27_683 - hypothetical protein 663 34.59 -1 751381..752415 - 344 208434639 - HPG27_684 - hypothetical protein 664 36.27 0 752424..752729 - 101 208434640 - HPG27_685 - hypothetical protein 665 34.39 -1 752839..753693 - 284 208434641 - HPG27_686 - labile enterotoxin outputA 666 37.72 0 755691..756488 - 265 208434642 - HPG27_687 - labile enterotoxin outputA 667 36.07 0 756485..757141 - 218 208434643 - HPG27_688 - hypothetical protein 668 33.95 -1 757361..758335 - 324 208434644 - HPG27_689 - hypothetical protein 669 40.68 0 758447..759766 - 439 208434645 - HPG27_690 - hypothetical protein 670 38.96 0 759768..760229 - 153 208434646 - HPG27_691 - xanthine guanine phosphoribosyl transferase 671 41.30 0 760238..761392 - 384 208434647 - HPG27_692 - phosphoserine amino transferase 672 38.78 0 761496..761972 + 158 208434648 - HPG27_693 - phosphatidyl glycerophosphatase A 673 35.14 -1 762044..763093 + 349 208434649 - HPG27_694 - D-alanine: D-alanine ligase A 674 36.23 0 763093..763818 + 241 208434650 - HPG27_695 - 2-hydroxy-6-oxohepta-2,4-dienoatehydrolase 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0