version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 519 42.35 0 573809..574507 - 232 208434495 - HPG27_534 - hypothetical protein 520 39.40 0 574516..575388 - 290 208434496 lepB HPG27_535 - signal peptidase I 521 42.61 0 575388..576260 - 290 208434497 - HPG27_536 - methylene-tetra hydrofolate dehydrogenase 522 37.05 0 576339..578384 - 681 208434498 - HPG27_537 - hypothetical protein 523 35.14 -1 578390..578944 - 184 208434499 - HPG27_538 - hypothetical protein 524 38.81 0 578951..580027 - 358 208434500 - HPG27_539 - hypothetical protein 525 39.41 0 580045..581064 - 339 208434501 - HPG27_540 - dihydroorotase 526 37.12 0 582017..582913 - 298 208434502 - HPG27_542 - hypothetical protein 527 36.83 0 582910..583281 - 123 208434503 fliY-2 HPG27_543 - flagellar switch protein 528 40.49 0 583363..584019 - 218 208434504 - HPG27_544 - endonuclease III 529 39.83 0 584016..584246 - 76 208434505 - HPG27_545 - hypothetical protein 530 35.04 -1 584248..587181 - 977 208434506 - HPG27_546 - hypothetical protein 531 39.58 0 587225..588088 + 287 208434507 - HPG27_547 - amino deoxy chorismate lyase 532 45.03 +1 588273..588614 + 113 208434508 - HPG27_548 - 2-oxoglutarate oxidoreductase OorD subunit 533 44.50 +1 588614..589741 + 375 208434509 korA HPG27_549 - 2-oxoglutarate oxidoreductase OorA subunit 534 44.16 +1 589744..590565 + 273 208434510 korB HPG27_550 - 2-oxoglutarate oxidoreductase OorB subunit 535 42.42 0 590565..591125 + 186 208434511 korC HPG27_551 - 2-oxoglutarate oxidoreductase OorC subunit 536 37.55 0 591285..594227 + 980 208434512 - HPG27_552 - type IIIR-M system restriction enzyme 537 37.81 0 594224..596098 + 624 208434513 - HPG27_553 - type III R-M system modification enzyme 538 36.36 0 596206..596370 + 54 208434514 - HPG27_554 - hypothetical protein 539 40.19 0 596379..597851 + 490 208434515 - HPG27_555 - DsbB-like protein 540 38.03 0 598266..598904 + 212 208434516 - HPG27_556 - hypothetical protein 541 40.90 0 598907..600889 - 660 208434517 - HPG27_557 - penicillin-binding protein 1A 542 37.68 0 600890..602038 - 382 208434518 bioF HPG27_558 - 8-amino-7-oxononanoate synthase 543 38.71 0 602035..603336 - 433 208434519 - HPG27_559 - hemolysin secretion protein 544 31.01 -2 603408..604355 - 315 208434520 - HPG27_560 - multi drug resistance protein 545 31.19 -2 604396..605190 - 264 208434521 - HPG27_561 - hypothetical protein 546 44.03 +1 605351..606883 + 510 208434522 flaA HPG27_562 - flagellin A 547 34.55 -1 607011..607667 + 218 208434523 - HPG27_563 - 3-methyladenine DNA glycosylase 548 38.83 0 607664..608281 + 205 208434524 - HPG27_564 - hypothetical protein 549 41.18 0 608350..609369 + 339 208434525 - HPG27_565 - uroporphyrinogen decarboxylase 550 38.91 0 609379..610812 + 477 208434526 hefA HPG27_566 - outer-membrane protein of the hefABC efflux system 551 40.43 0 610822..611526 + 234 208434527 hefB HPG27_567 - membrane fusion protein of the hefABC efflux system 552 42.47 0 611539..614625 + 1028 208434528 hefC HPG27_568 - cytoplasmic pump protein of the hefABC efflux system 553 39.47 0 614622..615191 + 189 208434529 - HPG27_569 - hypothetical protein 554 39.29 0 615343..624921 + 3192 208434530 - HPG27_570 - putative vacuolating cytotoxin(VacA)-like protein 555 30.54 -2 624980..625480 - 166 208434531 - HPG27_571 - ABC transporter, permease 556 30.83 -2 625497..625736 - 79 208434532 - HPG27_572 - ABC transporter, permease 557 32.76 -1 625736..626437 - 233 208434533 - HPG27_573 - ABC transporter. ATP-binding protein 558 38.74 0 626748..627080 - 110 208434534 - HPG27_574 - hypothetical protein 559 38.95 0 627181..629157 - 658 208434535 ligA HPG27_575 - DNA ligase 560 38.85 0 629236..630177 + 313 208434536 cheV-1 HPG27_576 - chemotaxis protein 561 40.60 0 630212..631945 + 577 208434537 - HPG27_577 - aspartyl-tRNA synthetase 562 38.89 0 631962..632537 + 191 208434538 - HPG27_578 - adenylate kinase 563 38.86 0 632562..633122 + 186 208434539 - HPG27_579 - putative lipopolysaccharide biosynthesis protein 564 36.18 0 633193..633825 + 210 208434540 - HPG27_580 - putative lipopolysaccharide biosynthesis protein 565 41.19 0 633877..634398 + 173 208434541 - HPG27_581 - inorganic pyrophosphatase 566 39.06 0 634540..636636 - 698 208434542 mutS2 HPG27_582 - DNA mismatch repair protein 567 36.48 0 636788..637168 - 126 208434543 - HPG27_583 - hypothetical protein 568 38.08 0 637168..638430 - 420 208434544 - HPG27_584 - UDP-N-acetylmuramate-alanine ligase 569 39.54 0 638510..639637 - 375 208434545 - HPG27_585 - amino transferase 570 42.87 0 639757..640836 + 359 208434546 - HPG27_586 - 1-hydroxy-2-methyl-2-(E)-butenyl4-diphosphate synthetase 571 40.63 0 640839..642044 + 401 208434547 - HPG27_587 - tetra hydro dipicolinateN-succinyl transferase 572 44.19 +1 642056..643114 + 352 208434548 - HPG27_588 - cysteine-rich protein F 573 29.76 -2 643197..643364 + 55 208434549 - HPG27_589 - hypothetical protein 574 40.22 0 643498..645384 + 628 208434550 - HPG27_590 - hypothetical protein 575 45.30 +1 645428..646012 - 194 208434551 - HPG27_591 - modulator of drug activity 576 46.49 +1 646172..647326 + 384 208434552 hydA HPG27_592 - quinone-reactive Ni/Fe hydrogenase 577 42.72 0 647336..649072 + 578 208434553 hydB HPG27_593 - quinone-reactive Ni/Fe hydrogenase 578 40.44 0 649085..649759 + 224 208434554 hydC HPG27_594 - quinone-reactive Ni/Fe hydrogenase 579 42.83 0 649756..650292 + 178 208434555 hydD HPG27_595 - quinone-reactive Ni/Fe hydrogenase 580 37.56 0 650294..651832 + 512 208434556 hydE HPG27_596 - hypothetical protein 581 33.33 -1 651837..652193 - 118 208434557 - HPG27_597 - hypothetical protein 582 42.38 0 652268..652720 - 150 208434558 - HPG27_598 - hypothetical protein 583 38.20 0 652914..653837 + 307 208434559 hopH HPG27_599 - outer membrane protein 584 39.35 0 653883..654563 - 226 208434560 - HPG27_600 - ExsB trans-regulatory protein 585 35.57 0 654626..655834 + 402 208434561 - HPG27_601 - poly(A) polymerase 586 39.68 0 655848..656351 + 167 208434562 - HPG27_602 - hypothetical protein 587 41.72 0 656366..657223 + 285 208434563 - HPG27_603 - putative 3-hydroxy acid dehydrogenase 588 41.07 0 657244..657876 + 210 208434564 - HPG27_604 - NAD(P)H-flavinoxido reductase 589 37.12 0 658041..659360 + 439 208434565 - HPG27_605 - glutamyl-tRNA synthetase 590 40.14 0 659357..659650 + 97 208434566 - HPG27_606 - hypothetical protein 591 37.85 0 659664..661346 + 560 208434567 - HPG27_607 - soluble lytic murein transglycosylase 592 41.97 0 661343..662164 + 273 208434568 - HPG27_608 - UDP-glucosepyrophosphorylase 593 35.54 0 662176..662583 + 135 208434569 - HPG27_609 - hypothetical protein 594 44.52 +1 662586..663854 + 422 208434570 - HPG27_610 - UDP-N-acetylglucosamine enolpyruvyl transferase 595 43.07 +1 663912..665318 + 468 208434571 - HPG27_611 - aspartate ammonia-lyase 596 40.44 0 665363..665953 + 196 208434572 - HPG27_612 - hypothetical protein 597 36.72 0 665962..667350 - 462 208434573 - HPG27_613 - alpha1,3-fucosyl transferase 598 42.31 0 667389..668012 - 207 208434574 - HPG27_614 - phospho serine phosphatase 599 38.49 0 668028..668531 - 167 208434575 - HPG27_615 - non heme iron-containing ferritin 600 38.60 0 668828..669910 + 360 208434576 - HPG27_616 - hypothetical protein 601 43.25 +1 670032..672743 + 903 208434577 - HPG27_617 - protective surface antigen D15 602 40.87 0 672745..673806 + 353 208434578 - HPG27_618 - hypothetical protein 603 38.01 0 673812..675116 + 434 208434579 - HPG27_619 - processing protease 604 41.82 0 675116..676540 + 474 208434580 - HPG27_620 - Glu-tRNA(Gln) amido transferase subunit B 605 39.42 0 676540..677787 + 415 208434581 - HPG27_621 - hypothetical protein 606 34.61 -1 677799..678815 + 338 208434582 - HPG27_622 - hypothetical protein 607 40.40 0 678937..679233 + 98 208434583 - HPG27_623 - ribonuclease H 608 40.00 0 679245..679964 + 239 208434584 - HPG27_624 - ribonuclease III 609 42.17 0 679961..681058 + 365 208434585 - HPG27_625 - chorismate synthase 610 33.91 -1 681096..681611 + 171 208434586 - HPG27_626 - hypothetical protein 611 39.81 0 681611..682984 + 457 208434587 - HPG27_627 - oxygen-independent coproporphyrinogen III oxidase 612 39.17 0 682981..684282 + 433 208434588 - HPG27_628 - glycerol-3-phosphate dehydrogenase 613 39.83 0 686461..689124 + 887 208434589 - HPG27_630 - hypothetical protein 614 42.56 0 689366..690178 + 270 208434590 horF HPG27_631 - outer membrane protein 615 43.05 +1 690337..691509 + 390 208434591 - HPG27_632 - aspartate amino transferase 616 31.52 -2 691653..691982 + 109 208434592 - HPG27_633 - hypothetical protein 617 38.10 0 691989..693080 + 363 208434593 - HPG27_634 - integrase-recombinase protein 618 36.69 0 693142..693648 - 168 208434594 - HPG27_635 - methylated-DNA--protein-cysteine methyl transferase 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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