version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 260 41.71 0 302435..303652 + 405 208434236 - HPG27_269 - diaminopimelate decarboxylase 261 31.62 -2 303657..303947 + 96 208434237 - HPG27_270 - chorismate mutase 262 35.51 0 303960..304832 + 290 208434238 - HPG27_271 - hypothetical protein 263 36.37 0 304833..306512 + 559 208434239 - HPG27_272 - para-amino benzoate synthetase 264 44.71 +1 306706..307725 + 339 208434240 aimE HPG27_273 - aliphatic amidase 265 39.97 0 307808..310294 - 828 208434241 flgL HPG27_274 - putative flagellar-hook associated protein 3 266 40.00 0 310537..310851 + 104 208434242 - HPG27_275 - ribosomalprotein L21 267 44.57 +1 310866..311132 + 88 208434243 rpmA HPG27_276 - ribosomal protein L27 268 41.09 0 311249..312898 + 549 208434244 hbpA HPG27_277 - periplasmic dipeptide-binding protein 269 44.88 +1 312909..313913 + 334 208434245 dppB HPG27_278 - dipeptide permease protein 270 46.27 +1 313913..314770 + 285 208434246 dppC HPG27_279 - dipeptide permease protein 271 42.94 +1 314782..315645 + 287 208434247 appD HPG27_280 - dipeptide ABC transporter 272 42.01 0 315642..316448 + 268 208434248 dppF HPG27_281 - dipeptide ABC transporter 273 44.41 +1 316467..317549 + 360 208434249 - HPG27_282 - GTP-binding protein 274 41.87 0 317586..318581 + 331 208434250 - HPG27_283 - hypothetical protein 275 37.48 0 318827..319381 + 184 208434251 - HPG27_284 - hypothetical protein 276 43.77 +1 319391..320683 + 430 208434252 - HPG27_285 - glutamate-1-semialdehyde 2,1-aminomutase 277 37.00 0 320680..320952 + 90 208434253 - HPG27_286 - hypothetical protein 278 37.04 0 320968..321372 + 134 208434254 - HPG27_287 - hypothetical protein 279 42.71 0 321456..322340 + 294 208434255 - HPG27_288 - putative N-carbamoyl-D-amino acid amidohydrolase 280 44.78 +1 322353..323234 + 293 208434256 - HPG27_289 - hypothetical protein 281 32.75 -1 323288..323977 - 229 208434257 - HPG27_290 - typeII restriction enzyme 282 40.65 0 325188..325556 + 122 208434258 - HPG27_292 - hypothetical protein 283 41.33 0 325556..326518 + 320 208434259 - HPG27_293 - conserved ATP/GTP binding protein 284 40.40 0 326524..327669 - 381 208434260 narK HPG27_294 - nitrite extrusion protein 285 39.22 0 327773..327925 - 50 208434261 - HPG27_295 - hypothetical protein 286 36.55 0 328012..328260 - 82 208434262 - HPG27_296 - hypothetical protein 287 33.87 -1 328325..328696 - 123 208434263 - HPG27_297 - hypothetical protein 288 44.65 +1 329099..331333 - 744 208434264 babA HPG27_298 - outer membrane protein 289 40.85 0 331602..332333 - 243 208434265 - HPG27_299 - hypothetical protein 290 38.19 0 332418..334043 - 541 208434266 argS HPG27_300 - arginyl-tRNA synthetase 291 31.69 -1 334165..334347 + 60 208434267 - HPG27_301 - hypothetical protein 292 37.52 0 334358..334978 - 206 208434268 - HPG27_302 - 5'-guanylate kinase 293 38.12 0 334971..336410 - 479 208434269 - HPG27_303 - polyE-rich protein 294 38.31 0 336554..337096 + 180 208434270 - HPG27_304 - membrane bound endonuclease 295 39.84 0 337105..337842 - 245 208434271 horC HPG27_305 - outer membrane protein 296 40.48 0 337983..338696 + 237 208434272 flgH HPG27_306 - flagellar basal-body L-ring protein 297 37.39 0 338714..339403 + 229 208434273 neuA-1 HPG27_307 - CMP-N-acetyl neuraminic acid synthetase 298 36.36 0 339409..340266 + 285 208434274 neuA-2 HPG27_308 - CMP-N-acetyl neuraminic acid synthetase 299 30.57 -2 340263..340805 + 180 208434275 flaG-1 HPG27_309 - flagellar biosynthesis protein G 300 38.34 0 340738..341676 - 312 208434276 - HPG27_310 - putative tetraacyl disaccharide-1-P4-kinase 301 38.19 0 341673..342455 - 260 208434277 - HPG27_311 - NH(3)-dependent NAD+ synthetase 302 41.37 0 342676..343695 + 339 208434278 - HPG27_312 - ketol-acid reducto isomerase 303 42.38 0 343719..344525 + 268 208434279 minD HPG27_313 - cell division inhibitor 304 37.18 0 344522..344755 + 77 208434280 minE HPG27_314 - cell division topological specificity factor 305 41.95 0 344762..345562 + 266 208434281 dprA HPG27_315 - DNA processing chain A 306 41.98 0 345559..345963 + 134 208434282 - HPG27_316 - Holliday junction resolvase-like protein 307 33.77 -1 346081..346764 + 227 208434283 - HPG27_317 - cysteine-rich protein C 308 32.15 -1 346879..347217 + 112 208434284 - HPG27_318 - hypothetical protein 309 36.93 0 347234..347761 + 175 208434285 - HPG27_319 - hypothetical protein 310 39.82 0 347894..348448 + 184 208434286 - HPG27_320 - hypothetical protein 311 40.48 0 348668..348961 - 97 208434287 - HPG27_321 - hypothetical protein 312 41.48 0 349127..349912 + 261 208434288 - HPG27_322 - hypothetical protein 313 40.16 0 350091..351071 + 326 208434289 - HPG27_323 - hypothetical protein 314 43.06 +1 351089..351982 - 297 208434290 - HPG27_324 - pseudo uridine synthase D 315 39.91 0 351982..353532 - 516 208434291 recJ HPG27_325 - single-stranded-DNA specific exonuclease 316 42.73 0 353541..355157 - 538 208434292 - HPG27_326 - CTP synthetase 317 38.42 0 355418..356086 + 222 208434293 - HPG27_327 - hypothetical protein 318 39.38 0 356130..357833 + 567 208434294 fliF HPG27_328 - flagellar basal-body M-ring protein 319 41.28 0 357851..358882 + 343 208434295 fliG HPG27_329 - flagellar motor switch protein 320 37.05 0 358893..359645 + 250 208434296 fliH HPG27_330 - flagellar export protein 321 42.33 0 359642..361498 + 618 208434297 - HPG27_331 - 1-deoxyxylulose-5-phosphate synthase 322 41.74 0 361495..363303 + 602 208434298 lepA HPG27_332 - GTP-binding membrane protein 323 33.99 -1 363318..364073 + 251 208434299 - HPG27_333 - hypothetical protein 324 31.34 -2 364427..365029 + 200 208434300 - HPG27_334 - hypothetical protein 325 30.96 -2 365126..366433 + 435 208434301 - HPG27_335 - hypothetical protein 326 35.77 0 366486..366731 + 81 208434302 - HPG27_336 - hypothetical protein 327 42.47 0 366728..367537 - 269 208434303 flgG-1 HPG27_337 - flagellar basal-body rod protein 328 40.56 0 367591..368877 - 428 208434304 - HPG27_338 - alpha-ketoglutarate permease 329 26.80 -2 368980..369132 + 50 208434305 - HPG27_339 - hypothetical protein 330 40.04 0 369142..371721 - 859 208434306 ftsK HPG27_340 - cell division protein 331 35.36 -1 371718..374039 - 773 208434307 - HPG27_341 - hypothetical protein 332 43.30 +1 374036..375961 - 641 208434308 - HPG27_342 - transketolase A 333 36.43 0 376008..376781 - 257 208434309 - HPG27_343 - FMN adenylyltransferase 334 35.88 0 376816..377523 - 235 208434310 - HPG27_344 - hemolysin 335 38.18 0 377523..378038 - 171 208434311 - HPG27_345 - hypothetical protein 336 41.88 0 378105..379028 + 307 208434312 - HPG27_346 - aspartate transcarbamoylase 337 42.57 0 379322..380761 + 479 208434313 hofB HPG27_347 - outer membrane protein 338 39.49 0 380852..382507 + 551 208434314 - HPG27_348 - multidrug resistance protein 339 38.96 0 382663..383124 + 153 208434315 - HPG27_349 - hypothetical protein 340 38.07 0 383128..383697 + 189 208434316 - HPG27_350 - hypothetical protein 341 41.67 0 383822..384817 + 331 208434317 nixA HPG27_351 - high affinity nickel transport protein 342 33.72 -1 384821..385342 - 173 208434318 - HPG27_352 - hypothetical protein 343 39.94 0 385477..386793 + 438 208434319 - HPG27_353 - conserved hypothetical secreted protein 344 38.27 0 387010..387171 + 53 208434320 - HPG27_354 - hypothetical protein 345 39.80 0 387476..387676 - 66 208434321 copP HPG27_355 - copper ion binding protein 346 40.21 0 387677..389914 - 745 208434322 copA HPG27_356 - copper-transporting ATPase 347 40.40 0 389911..390561 - 216 208434323 pssA HPG27_357 - phosphatidyl serine synthase 348 30.59 -2 390614..390868 - 84 208434324 - HPG27_358 - hypothetical protein 349 42.97 +1 390871..392769 - 632 208434325 ftsH-2 HPG27_359 - cell division protein 350 37.42 0 392778..393755 - 325 208434326 - HPG27_360 - ribosomal protein L11 methyltransferase 351 41.07 0 393768..394142 - 124 208434327 cheY HPG27_361 - chemotaxis protein 352 38.05 0 394463..395035 + 190 208434328 horD HPG27_362 - outer membrane protein 353 34.07 -1 395167..395574 - 135 208434329 - HPG27_363 - hypothetical protein 354 39.05 0 395577..395786 - 69 208434330 - HPG27_364 - hypothetical protein 355 35.38 -1 395801..396337 - 178 208434331 - HPG27_365 - glucose-inhibited division protein B 356 38.34 0 396334..397371 - 345 208434332 - HPG27_366 - S-adenosyl methionine:tRNA ribosyltransferase-isomerase 357 40.31 0 397372..398073 - 233 208434333 - HPG27_367 - sec-independent protein translocase protein 358 37.18 0 398114..398581 - 155 208434334 - HPG27_368 - sec-independent protein translocase protein 359 41.35 0 398649..399659 - 336 208434335 ruvB HPG27_369 - Holliday junction DNA helicase 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0