version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 174 39.78 0 201367..201723 + 118 208434150 - HPG27_183 - hypothetical protein 175 43.43 +1 201963..202982 + 339 208434151 - HPG27_184 - fatty acid/phospholipid synthesis protein 176 42.90 +1 203007..203999 + 330 208434152 - HPG27_185 - beta-ketoacyl-acylcarrier protein synthase III 177 36.92 0 204127..204321 + 64 208434153 - HPG27_186 - hypothetical protein 178 39.06 0 204785..205168 - 127 208434154 - HPG27_187 - hypothetical protein 179 31.80 -1 205242..208370 - 1042 208434155 - HPG27_188 - hypothetical protein 180 43.90 +1 208467..209573 + 368 208434156 - HPG27_189 - ATP-binding protein 181 37.34 0 209588..210610 - 340 208434157 rfaJ-2 HPG27_190 - lipopolysaccharide 1,2-glycosyltransferase 182 39.86 0 210843..212267 + 474 208434158 hofA HPG27_191 - outer membrane protein 183 38.00 0 212370..214235 + 621 208434159 - HPG27_192 - chaperone and heatshock protein 90 184 40.24 0 214433..215185 - 250 208434160 - HPG27_193 - cysteine-rich protein A 185 40.96 0 215266..216432 - 388 208434161 - HPG27_194 - succinyl-diaminopimelate desuccinylase 186 41.96 0 216443..218308 - 621 208434162 - HPG27_195 - glucose inhibited division protein A 187 43.16 +1 218404..220062 + 552 208434163 - HPG27_196 - sodium-dependent transporter 188 44.69 +1 220075..220875 + 266 208434164 - HPG27_197 - CDP-diacylglycerol synthetase 189 40.87 0 220876..221976 + 366 208434165 - HPG27_198 - 1-deoxy-D-xylulose5-phosphate reducto isomerase 190 42.39 0 222157..222708 - 183 208434166 - HPG27_199 - phospholipid-binding protein 191 38.96 0 222854..223315 + 153 208434167 - HPG27_200 - hypothetical protein 192 41.95 0 223328..224650 + 440 208434168 - HPG27_201 - cysteine desulfurase 193 44.24 +1 224672..225652 + 326 208434169 - HPG27_202 - nifU-like protein 194 36.32 0 225808..226041 + 77 208434170 - HPG27_203 - hypothetical protein 195 43.36 +1 226154..227500 + 448 208434171 - HPG27_204 - DNA repair protein 196 40.09 0 227624..228703 + 359 208434172 - HPG27_205 - bifunctional methioninesulfoxide reductaseA/B protein 197 42.45 0 229070..229903 - 277 208434173 - HPG27_206 - hypothetical protein 198 42.51 0 230115..232196 - 693 208434174 - HPG27_207 - outer membrane protein 199 41.45 0 232431..233588 + 385 208434175 - HPG27_208 - putative sulfate permease 200 42.30 0 233816..235276 - 486 208434176 hopA HPG27_209 - outer membrane protein 201 39.21 0 235470..236201 - 243 208434177 - HPG27_210 - 3-deoxy-manno-octulosonate cytidylyl transferase 202 39.85 0 236309..237106 + 265 208434178 - HPG27_211 - disulphide isomerase 203 45.93 +1 237122..237772 + 216 208434179 - HPG27_212 - motility protein 204 39.81 0 237796..238968 + 390 208434180 - HPG27_213 - glutathione spermidine synthetase 205 39.92 0 238968..239498 + 176 208434181 - HPG27_214 - hypothetical protein 206 41.20 0 240264..241331 - 355 208434182 - HPG27_215 - cysteine-rich protein E 207 37.37 0 241424..241795 - 123 208434183 - HPG27_216 - hypothetical protein 208 42.67 0 241795..242715 - 306 208434184 - HPG27_217 - porphobilinogen deaminase 209 41.12 0 242726..244459 - 577 208434185 - HPG27_218 - prolyl-tRNA synthetase 210 37.70 0 244463..245812 - 449 208434186 - HPG27_219 - glutamyl-tRNA reductase 211 36.26 0 245812..246735 - 307 208434187 - HPG27_220 - putative octaprenyl-diphosphate synthase 212 33.87 -1 246745..247116 - 123 208434188 - HPG27_221 - hypothetical protein 213 36.14 0 247133..247417 - 94 208434189 - HPG27_222 - hypothetical protein 214 37.70 0 247438..247872 - 144 208434190 - HPG27_223 - neutrophil activating protein 215 37.00 0 248079..249224 - 381 208434191 - HPG27_224 - histidine kinase sensor protein 216 35.53 0 249221..249538 - 105 208434192 - HPG27_225 - hypothetical protein 217 41.59 0 249535..250563 - 342 208434193 flgI HPG27_226 - flagellar basal-body P-ring protein 218 42.73 0 250762..252240 + 492 208434194 - HPG27_227 - ATP-dependent RNA helicase 219 44.17 +1 252261..253349 + 362 208434195 - HPG27_228 - hypothetical protein 220 37.41 0 253356..253895 + 179 208434196 - HPG27_229 - hypothetical protein 221 40.62 0 253978..255528 - 516 208434197 - HPG27_230 - oligopeptide permease ATPase protein 222 43.79 +1 255538..256560 - 340 208434198 - HPG27_231 - oligopeptide permease integral membrane protein 223 41.37 0 256896..258326 + 476 208434199 hopF HPG27_232 - outer membrane protein 224 42.04 0 258339..259751 + 470 208434200 hopG-1 HPG27_233 - outer membrane protein 225 43.69 +1 259850..261085 + 411 208434201 - HPG27_234 - adenylosuccinate synthetase 226 34.73 -1 261082..261510 + 142 208434202 - HPG27_235 - hypothetical protein 227 38.34 0 261521..262159 + 212 208434203 - HPG27_236 - conserved hypothetical secreted protein 228 40.74 0 262159..263211 + 350 208434204 - HPG27_237 - hypothetical protein 229 40.78 0 263224..264486 + 420 208434205 - HPG27_238 - exonuclease VII, large subunit 230 31.43 -2 264505..265659 - 384 208434206 - HPG27_239 - type III adenine methyltransferase 231 31.06 -2 265670..266284 - 204 208434207 - HPG27_240 - hypothetical protein 232 34.96 -1 266397..267134 + 245 208434208 - HPG27_241 - type II DNA modification enzyme 233 38.68 0 267131..267916 + 261 208434209 - HPG27_242 - typeII DNA modification enzyme 234 41.19 0 267988..270558 + 856 208434210 clpB HPG27_243 - ATP-dependent protease binding subunit / heatshock protein 235 40.56 0 270616..271335 + 239 208434211 - HPG27_244 - cytochrome c biogenesis protein 236 37.99 0 271345..272481 + 378 208434212 pyrC HPG27_245 - dihydroorotase 237 40.27 0 272499..273695 + 398 208434213 - HPG27_246 - chlorohydrolase 238 36.21 0 273756..273998 + 80 208434214 - HPG27_247 - hypothetical protein 239 42.16 0 274008..275321 + 437 208434215 - HPG27_248 - conserved hypothetical ATP-binding protein 240 41.74 0 275361..276014 + 217 208434216 - HPG27_249 - hypothetical protein 241 35.16 -1 276055..276987 + 310 208434217 - HPG27_250 - hypothetical protein 242 36.92 0 277036..277509 + 157 208434218 - HPG27_251 - hypothetical protein 243 35.78 0 277506..277913 + 135 208434219 - HPG27_252 - hypothetical protein 244 37.09 0 278060..278458 + 132 208434220 - HPG27_253 - hypothetical protein 245 37.04 0 278495..279790 + 431 208434221 - HPG27_254 - ATP-dependent nuclease 246 37.99 0 279921..280478 + 185 208434222 - HPG27_255 - indole-3-glycerol phosphate synthase 247 43.53 +1 280535..280789 + 84 208434223 - HPG27_256 - ferrodoxin 248 41.03 0 280799..282253 + 484 208434224 - HPG27_257 - guanosine pentaphosphate phosphohydrolase 249 36.89 0 282250..283260 + 336 208434225 - HPG27_258 - lipopolysaccharide heptosyltransferase-1 250 40.02 0 283257..284243 + 328 208434226 - HPG27_259 - putative lipid A biosynthesis acyltransferase 251 42.56 0 284497..285612 - 371 208434227 - HPG27_260 - tRNA-guanine transglycosylase 252 37.01 0 285663..287105 + 480 208434228 - HPG27_261 - hypothetical protein 253 37.21 0 287110..288141 + 343 208434229 - HPG27_262 - 3-dehydroquinate synthase 254 36.87 0 288147..289703 + 518 208434230 - HPG27_263 - hypothetical protein 255 39.54 0 289700..290956 + 418 208434231 - HPG27_264 - hypothetical protein 256 38.83 0 291012..292595 + 527 208434232 ftsH-1 HPG27_265 - cell division protein 257 36.03 0 292598..293116 + 172 208434233 - HPG27_266 - hypothetical protein 258 41.77 0 293129..293602 + 157 208434234 - HPG27_267 - hypothetical protein 259 41.35 0 293670..302387 + 2905 208434235 - HPG27_268 - putative vacuolating cytotoxin(VacA)-like protein 260 41.71 0 302435..303652 + 405 208434236 - HPG27_269 - diaminopimelate decarboxylase 261 31.62 -2 303657..303947 + 96 208434237 - HPG27_270 - chorismate mutase 262 35.51 0 303960..304832 + 290 208434238 - HPG27_271 - hypothetical protein 263 36.37 0 304833..306512 + 559 208434239 - HPG27_272 - para-amino benzoate synthetase 264 44.71 +1 306706..307725 + 339 208434240 aimE HPG27_273 - aliphatic amidase 265 39.97 0 307808..310294 - 828 208434241 flgL HPG27_274 - putative flagellar-hook associated protein 3 266 40.00 0 310537..310851 + 104 208434242 - HPG27_275 - ribosomalprotein L21 267 44.57 +1 310866..311132 + 88 208434243 rpmA HPG27_276 - ribosomal protein L27 268 41.09 0 311249..312898 + 549 208434244 hbpA HPG27_277 - periplasmic dipeptide-binding protein 269 44.88 +1 312909..313913 + 334 208434245 dppB HPG27_278 - dipeptide permease protein 270 46.27 +1 313913..314770 + 285 208434246 dppC HPG27_279 - dipeptide permease protein 271 42.94 +1 314782..315645 + 287 208434247 appD HPG27_280 - dipeptide ABC transporter 272 42.01 0 315642..316448 + 268 208434248 dppF HPG27_281 - dipeptide ABC transporter 273 44.41 +1 316467..317549 + 360 208434249 - HPG27_282 - GTP-binding protein 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0