version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 137 40.23 0 162742..163698 + 318 208434113 - HPG27_145 - hypothetical protein 138 36.14 0 163695..164798 - 367 208434114 rfaJ-1 HPG27_146 - lipopolysaccharide1,2-glycosyltransferase 139 40.93 0 164950..165870 + 306 208434115 - HPG27_147 - cysteine-rich protein D 140 41.77 0 166658..167380 - 240 208434116 - HPG27_148 - hypothetical protein 141 39.61 0 167381..168352 - 323 208434117 - HPG27_149 - delta-amino levulinicacid dehydratase 142 35.86 0 168362..169708 - 448 208434118 - HPG27_150 - putative histidine kinase sensor protein 143 38.35 0 169732..170409 - 225 208434119 - HPG27_151 - response regulator 144 38.93 0 170644..171072 - 142 208434120 - HPG27_152 - hypothetical protein 145 33.71 -1 171111..171374 - 87 208434121 - HPG27_153 - hypothetical protein 146 42.47 0 171408..172688 - 426 208434122 - HPG27_154 - collagenase 147 40.85 0 172691..173422 - 243 208434123 - HPG27_155 - hypothetical protein 148 41.76 0 173493..174584 - 363 208434124 - HPG27_156 - peptide chain release factor RF-2 149 37.67 0 174645..175820 - 391 208434125 - HPG27_157 - molybdopterin biosynthesis protein 150 41.15 0 175830..176597 - 255 208434126 fliR HPG27_158 - flagellar biosynthetic protein 151 32.92 -1 176591..177319 - 242 208434127 - HPG27_159 - hypothetical protein 152 38.22 0 177806..178705 + 299 208434128 - HPG27_160 - peptidyl-prolylcis-transisomerase C 153 42.86 0 178723..179646 + 307 208434129 - HPG27_161 - fructose-bisphosphate aldolase 154 45.04 +1 179668..180231 + 187 208434130 - HPG27_162 - translation elongation factor EF-P 155 40.27 0 180871..181893 - 340 208434131 - HPG27_163 - sialic acid synthase 156 41.28 0 181896..182537 - 213 208434132 - HPG27_164 - ABC transporter 157 37.72 0 182534..183811 - 425 208434133 - HPG27_165 - apolipoprotein N-acyltransferase 158 34.55 -1 183880..184044 + 54 208434134 - HPG27_166 - hypothetical protein 159 38.60 0 184048..184749 + 233 208434135 - HPG27_167 - hypothetical protein 160 40.11 0 184759..186264 + 501 208434136 - HPG27_168 - lysyl-tRNA synthetase 161 40.69 0 186264..187514 + 416 208434137 - HPG27_169 - serine hydroxy methyltransferase 162 40.88 0 187525..188067 + 180 208434138 - HPG27_170 - hypothetical protein 163 39.88 0 188090..188899 + 269 208434139 - HPG27_171 - hypothetical protein 164 41.20 0 191141..191674 + 177 208434140 - HPG27_173 - hypothetical protein 165 38.17 0 191680..193188 - 502 208434141 - HPG27_174 - phospholipase D-family protein 166 45.67 +1 193210..193914 - 234 208434142 frdB HPG27_175 - fumarate reductase, iron-sulfur subunit 167 45.83 +1 193940..196084 - 714 208434143 frdA HPG27_176 - fumarate reductase. flavo protein subunit 168 40.62 0 196094..196861 - 255 208434144 frdC HPG27_177 - fumarate reductase, cytochrome b subunit 169 35.46 0 197079..197783 + 234 208434145 - HPG27_178 - triose phosphate isomerase 170 43.00 +1 197793..198620 + 275 208434146 - HPG27_179 - enoyl-(acyl-carrier-protein) reductase 171 42.53 0 198630..199640 + 336 208434147 - HPG27_180 - UDP-3-0-(3-hydroxymyristoyl) glucosamine N-acyltransferase 172 44.39 +1 199705..200862 + 385 208434148 - HPG27_181 - S-adenosyl methionine synthetase 173 42.51 0 200929..201342 + 137 208434149 - HPG27_182 - nucleoside diphosphate kinase 174 39.78 0 201367..201723 + 118 208434150 - HPG27_183 - hypothetical protein 175 43.43 +1 201963..202982 + 339 208434151 - HPG27_184 - fatty acid/phospholipid synthesis protein 176 42.90 +1 203007..203999 + 330 208434152 - HPG27_185 - beta-ketoacyl-acylcarrier protein synthase III 177 36.92 0 204127..204321 + 64 208434153 - HPG27_186 - hypothetical protein 178 39.06 0 204785..205168 - 127 208434154 - HPG27_187 - hypothetical protein 179 31.80 -1 205242..208370 - 1042 208434155 - HPG27_188 - hypothetical protein 180 43.90 +1 208467..209573 + 368 208434156 - HPG27_189 - ATP-binding protein 181 37.34 0 209588..210610 - 340 208434157 rfaJ-2 HPG27_190 - lipopolysaccharide 1,2-glycosyltransferase 182 39.86 0 210843..212267 + 474 208434158 hofA HPG27_191 - outer membrane protein 183 38.00 0 212370..214235 + 621 208434159 - HPG27_192 - chaperone and heatshock protein 90 184 40.24 0 214433..215185 - 250 208434160 - HPG27_193 - cysteine-rich protein A 185 40.96 0 215266..216432 - 388 208434161 - HPG27_194 - succinyl-diaminopimelate desuccinylase 186 41.96 0 216443..218308 - 621 208434162 - HPG27_195 - glucose inhibited division protein A 187 43.16 +1 218404..220062 + 552 208434163 - HPG27_196 - sodium-dependent transporter 188 44.69 +1 220075..220875 + 266 208434164 - HPG27_197 - CDP-diacylglycerol synthetase 189 40.87 0 220876..221976 + 366 208434165 - HPG27_198 - 1-deoxy-D-xylulose5-phosphate reducto isomerase 190 42.39 0 222157..222708 - 183 208434166 - HPG27_199 - phospholipid-binding protein 191 38.96 0 222854..223315 + 153 208434167 - HPG27_200 - hypothetical protein 192 41.95 0 223328..224650 + 440 208434168 - HPG27_201 - cysteine desulfurase 193 44.24 +1 224672..225652 + 326 208434169 - HPG27_202 - nifU-like protein 194 36.32 0 225808..226041 + 77 208434170 - HPG27_203 - hypothetical protein 195 43.36 +1 226154..227500 + 448 208434171 - HPG27_204 - DNA repair protein 196 40.09 0 227624..228703 + 359 208434172 - HPG27_205 - bifunctional methioninesulfoxide reductaseA/B protein 197 42.45 0 229070..229903 - 277 208434173 - HPG27_206 - hypothetical protein 198 42.51 0 230115..232196 - 693 208434174 - HPG27_207 - outer membrane protein 199 41.45 0 232431..233588 + 385 208434175 - HPG27_208 - putative sulfate permease 200 42.30 0 233816..235276 - 486 208434176 hopA HPG27_209 - outer membrane protein 201 39.21 0 235470..236201 - 243 208434177 - HPG27_210 - 3-deoxy-manno-octulosonate cytidylyl transferase 202 39.85 0 236309..237106 + 265 208434178 - HPG27_211 - disulphide isomerase 203 45.93 +1 237122..237772 + 216 208434179 - HPG27_212 - motility protein 204 39.81 0 237796..238968 + 390 208434180 - HPG27_213 - glutathione spermidine synthetase 205 39.92 0 238968..239498 + 176 208434181 - HPG27_214 - hypothetical protein 206 41.20 0 240264..241331 - 355 208434182 - HPG27_215 - cysteine-rich protein E 207 37.37 0 241424..241795 - 123 208434183 - HPG27_216 - hypothetical protein 208 42.67 0 241795..242715 - 306 208434184 - HPG27_217 - porphobilinogen deaminase 209 41.12 0 242726..244459 - 577 208434185 - HPG27_218 - prolyl-tRNA synthetase 210 37.70 0 244463..245812 - 449 208434186 - HPG27_219 - glutamyl-tRNA reductase 211 36.26 0 245812..246735 - 307 208434187 - HPG27_220 - putative octaprenyl-diphosphate synthase 212 33.87 -1 246745..247116 - 123 208434188 - HPG27_221 - hypothetical protein 213 36.14 0 247133..247417 - 94 208434189 - HPG27_222 - hypothetical protein 214 37.70 0 247438..247872 - 144 208434190 - HPG27_223 - neutrophil activating protein 215 37.00 0 248079..249224 - 381 208434191 - HPG27_224 - histidine kinase sensor protein 216 35.53 0 249221..249538 - 105 208434192 - HPG27_225 - hypothetical protein 217 41.59 0 249535..250563 - 342 208434193 flgI HPG27_226 - flagellar basal-body P-ring protein 218 42.73 0 250762..252240 + 492 208434194 - HPG27_227 - ATP-dependent RNA helicase 219 44.17 +1 252261..253349 + 362 208434195 - HPG27_228 - hypothetical protein 220 37.41 0 253356..253895 + 179 208434196 - HPG27_229 - hypothetical protein 221 40.62 0 253978..255528 - 516 208434197 - HPG27_230 - oligopeptide permease ATPase protein 222 43.79 +1 255538..256560 - 340 208434198 - HPG27_231 - oligopeptide permease integral membrane protein 223 41.37 0 256896..258326 + 476 208434199 hopF HPG27_232 - outer membrane protein 224 42.04 0 258339..259751 + 470 208434200 hopG-1 HPG27_233 - outer membrane protein 225 43.69 +1 259850..261085 + 411 208434201 - HPG27_234 - adenylosuccinate synthetase 226 34.73 -1 261082..261510 + 142 208434202 - HPG27_235 - hypothetical protein 227 38.34 0 261521..262159 + 212 208434203 - HPG27_236 - conserved hypothetical secreted protein 228 40.74 0 262159..263211 + 350 208434204 - HPG27_237 - hypothetical protein 229 40.78 0 263224..264486 + 420 208434205 - HPG27_238 - exonuclease VII, large subunit 230 31.43 -2 264505..265659 - 384 208434206 - HPG27_239 - type III adenine methyltransferase 231 31.06 -2 265670..266284 - 204 208434207 - HPG27_240 - hypothetical protein 232 34.96 -1 266397..267134 + 245 208434208 - HPG27_241 - type II DNA modification enzyme 233 38.68 0 267131..267916 + 261 208434209 - HPG27_242 - typeII DNA modification enzyme 234 41.19 0 267988..270558 + 856 208434210 clpB HPG27_243 - ATP-dependent protease binding subunit / heatshock protein 235 40.56 0 270616..271335 + 239 208434211 - HPG27_244 - cytochrome c biogenesis protein 236 37.99 0 271345..272481 + 378 208434212 pyrC HPG27_245 - dihydroorotase 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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