version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 106 38.73 0 133114..133725 + 203 208434082 - HPG27_113 - translation initiation factor IF-3 107 41.54 0 133706..133900 + 64 208434083 rpmI HPG27_114 - ribosomal protein L35 108 41.88 0 133995..134345 + 116 208434084 rplT HPG27_115 - ribosomalprotein L20 109 41.81 0 134546..135406 + 286 208434085 horB HPG27_116 - outer membrane protein 110 37.04 0 135754..136185 + 143 208434086 - HPG27_117 - hypothetical protein 111 33.93 -1 136332..136499 + 55 208434087 - HPG27_118 - hypothetical protein 112 38.10 0 136595..137455 + 286 208434088 - HPG27_119 - hypothetical protein 113 42.98 +1 138106..139473 - 455 208434089 sdaA HPG27_120 - L-serine deaminase 114 38.65 0 139473..140714 - 413 208434090 sdaC HPG27_121 - L-serine transporter 115 44.67 +1 140895..142244 + 449 208434091 - HPG27_122 - tyrosine-regulated 3-deoxy-D-arabino-heptulosonate 7-phosphatesynthase 116 40.74 0 142895..143353 - 152 208434092 - HPG27_123 - bacterioferritin comigratory protein 117 40.15 0 143363..143905 - 180 208434093 - HPG27_124 - hypothetical protein 118 43.15 +1 143991..145436 - 481 208434094 - HPG27_125 - conserved hypothetical iron-sulfur protein 119 39.64 0 145466..146194 - 242 208434095 - HPG27_126 - conserved hypothetical secreted protein 120 43.33 +1 146425..148074 + 549 208434096 - HPG27_127 - L-lactate permease 121 42.81 0 148123..149778 + 551 208434097 - HPG27_128 - L-lactate permease 122 36.20 0 149802..150674 - 290 208434098 mutY HPG27_129 - A/G-specific adenine glycosylase 123 42.65 0 150789..152237 - 482 208434099 - HPG27_130 - C(4)-dicarboxylates and tricarboxylates/succinate antiporter 124 42.60 0 152407..153873 + 488 208434100 - HPG27_131 - cytochrome coxidase heme b and copper-binding subunit 125 43.35 +1 153886..154584 + 232 208434101 - HPG27_132 - cytochrome coxidase monoheme subunit 126 34.70 -1 154595..154813 + 72 208434102 - HPG27_133 - cytochrome coxidase subunit Q 127 42.66 0 154815..155693 + 292 208434103 - HPG27_134 - cytochrome coxidase diheme subunit 128 34.78 -1 155704..155910 + 68 208434104 - HPG27_135 - hypothetical protein 129 36.36 0 156011..156604 + 197 208434105 - HPG27_136 - hypothetical protein 130 37.76 0 157286..158053 + 255 208434106 - HPG27_138 - hypothetical protein 131 40.16 0 158050..158913 - 287 208434107 - HPG27_139 - hypothetical protein 132 44.25 +1 159012..160055 + 347 208434108 recA HPG27_140 - recombinase 133 43.72 +1 160067..161347 + 426 208434109 - HPG27_141 - enolase 134 41.33 0 161466..161615 + 49 208434110 - HPG27_142 - hypothetical protein 135 38.53 0 161632..162228 + 198 208434111 - HPG27_143 - hypothetical protein 136 39.47 0 162233..162721 + 162 208434112 - HPG27_144 - shikimic acid kinase I 137 40.23 0 162742..163698 + 318 208434113 - HPG27_145 - hypothetical protein 138 36.14 0 163695..164798 - 367 208434114 rfaJ-1 HPG27_146 - lipopolysaccharide1,2-glycosyltransferase 139 40.93 0 164950..165870 + 306 208434115 - HPG27_147 - cysteine-rich protein D 140 41.77 0 166658..167380 - 240 208434116 - HPG27_148 - hypothetical protein 141 39.61 0 167381..168352 - 323 208434117 - HPG27_149 - delta-amino levulinicacid dehydratase 142 35.86 0 168362..169708 - 448 208434118 - HPG27_150 - putative histidine kinase sensor protein 143 38.35 0 169732..170409 - 225 208434119 - HPG27_151 - response regulator 144 38.93 0 170644..171072 - 142 208434120 - HPG27_152 - hypothetical protein 145 33.71 -1 171111..171374 - 87 208434121 - HPG27_153 - hypothetical protein 146 42.47 0 171408..172688 - 426 208434122 - HPG27_154 - collagenase 147 40.85 0 172691..173422 - 243 208434123 - HPG27_155 - hypothetical protein 148 41.76 0 173493..174584 - 363 208434124 - HPG27_156 - peptide chain release factor RF-2 149 37.67 0 174645..175820 - 391 208434125 - HPG27_157 - molybdopterin biosynthesis protein 150 41.15 0 175830..176597 - 255 208434126 fliR HPG27_158 - flagellar biosynthetic protein 151 32.92 -1 176591..177319 - 242 208434127 - HPG27_159 - hypothetical protein 152 38.22 0 177806..178705 + 299 208434128 - HPG27_160 - peptidyl-prolylcis-transisomerase C 153 42.86 0 178723..179646 + 307 208434129 - HPG27_161 - fructose-bisphosphate aldolase 154 45.04 +1 179668..180231 + 187 208434130 - HPG27_162 - translation elongation factor EF-P 155 40.27 0 180871..181893 - 340 208434131 - HPG27_163 - sialic acid synthase 156 41.28 0 181896..182537 - 213 208434132 - HPG27_164 - ABC transporter 157 37.72 0 182534..183811 - 425 208434133 - HPG27_165 - apolipoprotein N-acyltransferase 158 34.55 -1 183880..184044 + 54 208434134 - HPG27_166 - hypothetical protein 159 38.60 0 184048..184749 + 233 208434135 - HPG27_167 - hypothetical protein 160 40.11 0 184759..186264 + 501 208434136 - HPG27_168 - lysyl-tRNA synthetase 161 40.69 0 186264..187514 + 416 208434137 - HPG27_169 - serine hydroxy methyltransferase 162 40.88 0 187525..188067 + 180 208434138 - HPG27_170 - hypothetical protein 163 39.88 0 188090..188899 + 269 208434139 - HPG27_171 - hypothetical protein 164 41.20 0 191141..191674 + 177 208434140 - HPG27_173 - hypothetical protein 165 38.17 0 191680..193188 - 502 208434141 - HPG27_174 - phospholipase D-family protein 166 45.67 +1 193210..193914 - 234 208434142 frdB HPG27_175 - fumarate reductase, iron-sulfur subunit 167 45.83 +1 193940..196084 - 714 208434143 frdA HPG27_176 - fumarate reductase. flavo protein subunit 168 40.62 0 196094..196861 - 255 208434144 frdC HPG27_177 - fumarate reductase, cytochrome b subunit 169 35.46 0 197079..197783 + 234 208434145 - HPG27_178 - triose phosphate isomerase 170 43.00 +1 197793..198620 + 275 208434146 - HPG27_179 - enoyl-(acyl-carrier-protein) reductase 171 42.53 0 198630..199640 + 336 208434147 - HPG27_180 - UDP-3-0-(3-hydroxymyristoyl) glucosamine N-acyltransferase 172 44.39 +1 199705..200862 + 385 208434148 - HPG27_181 - S-adenosyl methionine synthetase 173 42.51 0 200929..201342 + 137 208434149 - HPG27_182 - nucleoside diphosphate kinase 174 39.78 0 201367..201723 + 118 208434150 - HPG27_183 - hypothetical protein 175 43.43 +1 201963..202982 + 339 208434151 - HPG27_184 - fatty acid/phospholipid synthesis protein 176 42.90 +1 203007..203999 + 330 208434152 - HPG27_185 - beta-ketoacyl-acylcarrier protein synthase III 177 36.92 0 204127..204321 + 64 208434153 - HPG27_186 - hypothetical protein 178 39.06 0 204785..205168 - 127 208434154 - HPG27_187 - hypothetical protein 179 31.80 -1 205242..208370 - 1042 208434155 - HPG27_188 - hypothetical protein 180 43.90 +1 208467..209573 + 368 208434156 - HPG27_189 - ATP-binding protein 181 37.34 0 209588..210610 - 340 208434157 rfaJ-2 HPG27_190 - lipopolysaccharide 1,2-glycosyltransferase 182 39.86 0 210843..212267 + 474 208434158 hofA HPG27_191 - outer membrane protein 183 38.00 0 212370..214235 + 621 208434159 - HPG27_192 - chaperone and heatshock protein 90 184 40.24 0 214433..215185 - 250 208434160 - HPG27_193 - cysteine-rich protein A 185 40.96 0 215266..216432 - 388 208434161 - HPG27_194 - succinyl-diaminopimelate desuccinylase 186 41.96 0 216443..218308 - 621 208434162 - HPG27_195 - glucose inhibited division protein A 187 43.16 +1 218404..220062 + 552 208434163 - HPG27_196 - sodium-dependent transporter 188 44.69 +1 220075..220875 + 266 208434164 - HPG27_197 - CDP-diacylglycerol synthetase 189 40.87 0 220876..221976 + 366 208434165 - HPG27_198 - 1-deoxy-D-xylulose5-phosphate reducto isomerase 190 42.39 0 222157..222708 - 183 208434166 - HPG27_199 - phospholipid-binding protein 191 38.96 0 222854..223315 + 153 208434167 - HPG27_200 - hypothetical protein 192 41.95 0 223328..224650 + 440 208434168 - HPG27_201 - cysteine desulfurase 193 44.24 +1 224672..225652 + 326 208434169 - HPG27_202 - nifU-like protein 194 36.32 0 225808..226041 + 77 208434170 - HPG27_203 - hypothetical protein 195 43.36 +1 226154..227500 + 448 208434171 - HPG27_204 - DNA repair protein 196 40.09 0 227624..228703 + 359 208434172 - HPG27_205 - bifunctional methioninesulfoxide reductaseA/B protein 197 42.45 0 229070..229903 - 277 208434173 - HPG27_206 - hypothetical protein 198 42.51 0 230115..232196 - 693 208434174 - HPG27_207 - outer membrane protein 199 41.45 0 232431..233588 + 385 208434175 - HPG27_208 - putative sulfate permease 200 42.30 0 233816..235276 - 486 208434176 hopA HPG27_209 - outer membrane protein 201 39.21 0 235470..236201 - 243 208434177 - HPG27_210 - 3-deoxy-manno-octulosonate cytidylyl transferase 202 39.85 0 236309..237106 + 265 208434178 - HPG27_211 - disulphide isomerase 203 45.93 +1 237122..237772 + 216 208434179 - HPG27_212 - motility protein 204 39.81 0 237796..238968 + 390 208434180 - HPG27_213 - glutathione spermidine synthetase 205 39.92 0 238968..239498 + 176 208434181 - HPG27_214 - hypothetical protein 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0