version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1389 38.15 0 1533635..1534195 + 186 208435365 - HPG27_1420 - peptidyl-tRNA hydrolase 1390 38.20 0 1534205..1535272 + 355 208435366 - HPG27_1421 - hypothetical protein 1391 31.24 -2 1535329..1536330 + 333 208435367 - HPG27_1422 - type II methylase 1392 27.67 -2 1536327..1537226 + 299 208435368 - HPG27_1423 - type II adenine specific DNA methyltransferase 1393 43.32 +1 1538902..1540032 - 376 208435369 hopK-3 HPG27_1425 - outer membrane protein 1394 36.99 0 1540247..1540684 + 145 208435370 - HPG27_1426 - hypothetical protein 1395 38.45 0 1543057..1543584 - 175 208435371 - HPG27_1428 - hypothetical protein 1396 39.71 0 1543755..1544789 - 344 208435372 - HPG27_1429 - riboflavin biosynthesis protein 1397 43.36 +1 1544793..1546019 - 408 208435373 gltS HPG27_1430 - sodium/glutamate symport carrier protein/glutamate permease 1398 40.94 0 1546162..1547304 + 380 208435374 - HPG27_1431 - hypothetical protein 1399 41.68 0 1547314..1548690 - 458 208435375 - HPG27_1432 - ferrodoxin-like protein 1400 40.26 0 1548766..1549458 + 230 208435376 - HPG27_1433 - hypothetical protein 1401 35.31 -1 1549455..1549808 + 117 208435377 - HPG27_1434 - dihydroneopterin aldolase 1402 39.58 0 1549831..1550118 + 95 208435378 - HPG27_1435 - FrpB-like protein 1403 45.08 +1 1550272..1552911 + 879 208435379 - HPG27_1436 - iron-regulated outer membrane protein 1404 38.16 0 1553139..1554299 + 386 208435380 - HPG27_1437 - seleno cysteine synthase 1405 40.15 0 1554401..1555588 + 395 208435381 - HPG27_1438 - transcription termination factor 1406 29.40 -2 1555810..1556520 - 236 208435382 - HPG27_1439 - hypothetical protein 1407 33.11 -1 1556561..1556998 - 145 208435383 - HPG27_1440 - hypothetical protein 1408 33.25 -1 1557796..1561350 - 1184 208435384 - HPG27_1441 - type II S restriction-modification protein 1409 38.78 0 1564374..1564961 - 195 208435385 - HPG27_1443 - type III R-M system modification enzyme 1410 32.97 -1 1564966..1566351 - 461 208435386 - HPG27_1444 - type III R-M system modification enzyme 1411 37.50 0 1566402..1568273 - 623 208435387 recG HPG27_1445 - DNA recombinase 1412 31.92 -1 1568355..1568708 + 117 208435388 - HPG27_1446 - hypothetical protein 1413 40.64 0 1568813..1569346 + 177 208435389 - HPG27_1447 - hypothetical protein 1414 38.38 0 1569343..1570095 - 250 208435390 - HPG27_1448 - exodeoxyribonuclease 1415 39.58 0 1570275..1571714 - 479 208435391 comH HPG27_1449 - periplasmic competence protein 1416 39.55 0 1571935..1573302 - 455 208435392 dnaA HPG27_1450 - chromosomal replication initiator protein 1417 37.38 0 1573454..1573996 + 180 208435393 - HPG27_1451 - purine nucleoside phosphorylase 1418 35.83 0 1574032..1574271 + 79 208435394 - HPG27_1452 - hypothetical protein 1419 40.80 0 1574272..1576065 + 597 208435395 - HPG27_1453 - glutamine fructose-6-phosphate aminotransferase 1420 39.39 0 1576089..1576715 + 208 208435396 - HPG27_1454 - thymidylate synthase 1421 32.55 -1 1576971..1577609 - 212 208435397 - HPG27_1455 - typeI R-M system specificity subunit 1422 38.12 0 1577620..1580064 - 814 208435398 - HPG27_1456 - typeI restriction enzyme M protein 1423 36.42 0 1580134..1583109 + 991 208435399 - HPG27_1457 - typeI restriction enzyme R protein 1424 37.01 0 1583109..1583816 + 235 208435400 - HPG27_1458 - hypothetical protein 1425 46.24 +1 1583885..1586410 - 841 208435401 - HPG27_1459 - iron (III) dicitrate transport protein 1426 39.32 0 1586762..1587730 - 322 208435402 rocF HPG27_1460 - arginase 1427 45.14 +1 1587935..1589077 + 380 208435403 - HPG27_1461 - alanine dehydrogenase 1428 35.83 0 1589200..1590921 + 573 208435404 - HPG27_1462 - hypothetical protein 1429 42.66 0 1590932..1591660 - 242 208435405 horL HPG27_1463 - outer membrane protein 1430 20.24 -2 1591657..1591824 - 55 208435406 - HPG27_1464 - hypothetical protein 1431 41.17 0 1591846..1592700 + 284 208435407 - HPG27_1465 - inorganic polyphosphate/ATP-NAD kinase 1432 40.06 0 1592714..1594288 + 524 208435408 recN HPG27_1466 - DNA repair protein 1433 33.03 -1 1594285..1595592 + 435 208435409 - HPG27_1467 - fibronectin/fibrinogen-binding protein 1434 41.75 0 1595612..1595908 + 98 208435410 - HPG27_1468 - hypothetical protein 1435 35.77 0 1596046..1597029 + 327 208435411 - HPG27_1469 - cysteine-rich protein C 1436 39.75 0 1597068..1597862 - 264 208435412 polC HPG27_1470 - DNA polymerase III epsilon subunit 1437 43.27 +1 1597909..1598562 - 217 208435413 - HPG27_1471 - D-ribulose-5-phosphate 3 epimerase 1438 37.57 0 1598633..1599505 + 290 208435414 - HPG27_1472 - fructose-1,6-bisphosphatase 1439 39.71 0 1599505..1599708 + 67 208435415 - HPG27_1473 - hypothetical protein 1440 35.23 -1 1599721..1600617 + 298 208435416 - HPG27_1474 - putative type II methylase protein 1441 34.31 -1 1600622..1601341 + 239 208435417 - HPG27_1475 - hypothetical protein 1442 43.82 +1 1601463..1602320 - 285 208435418 - HPG27_1476 - ubiquinol cytochrome c oxidoreductase, cytochrome c1 1443 42.94 +1 1602317..1603555 - 412 208435419 - HPG27_1477 - ubiquinol cytochrome c oxidoreductase,cytochrome b subunit 1444 46.03 +1 1603566..1604069 - 167 208435420 - HPG27_1478 - ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit 1445 39.67 0 1604193..1607192 - 999 208435421 - HPG27_1479 - transcription-repair coupling factor 1446 45.40 +1 1607196..1607510 - 104 208435422 - HPG27_1480 - hypothetical protein 1447 40.79 0 1607525..1608463 - 312 208435423 - HPG27_1481 - toxR-activated protein 1448 39.37 0 1608472..1609398 - 308 208435424 - HPG27_1482 - toxR-activated protein 1449 38.08 0 1609398..1610429 - 343 208435425 folC HPG27_1483 - folylpoly glutamate synthase 1450 39.18 0 1610557..1611069 - 170 208435426 - HPG27_1484 - hypothetical protein 1451 40.40 0 1611066..1613486 - 806 208435427 - HPG27_1485 - leucyl-tRNA synthetase 1452 42.48 0 1613497..1613835 - 112 208435428 - HPG27_1486 - hypothetical protein 1453 40.43 0 1613845..1614816 - 323 208435429 - HPG27_1487 - protein-export membrane protein 1454 43.39 +1 1614825..1616336 - 503 208435430 - HPG27_1488 - protein-export membrane protein 1455 37.91 0 1616389..1616781 - 130 208435431 - HPG27_1489 - conserved hypothetical secreted protein 1456 41.91 0 1616829..1618145 - 438 208435432 nhaA HPG27_1490 - Na+/H+ antiporter 1457 37.34 0 1618169..1621060 - 963 208435433 - HPG27_1491 - ATP-dependent nuclease 1458 38.55 0 1621341..1622126 + 261 208435434 rpsB HPG27_1492 - ribosomal protein S2 1459 40.54 0 1622126..1623193 + 355 208435435 - HPG27_1493 - translation elongation factor EF-Ts 1460 39.61 0 1623638..1625485 - 615 208435436 - HPG27_1494 - cell division protein 1461 42.12 0 1625641..1625970 - 109 208435437 fliE HPG27_1495 - flagellar basal-body protein 1462 45.68 +1 1626100..1626585 - 161 208435438 flgC HPG27_1496 - flagellar basal-body rod protein 1463 38.77 0 1626598..1627020 - 140 208435439 flgB HPG27_1497 - flagellar basal-body rod protein 1464 44.56 +1 1627224..1628390 + 388 208435440 - HPG27_1498 - cell division protein 1465 39.12 0 1628410..1629411 - 333 208435441 - HPG27_1499 - iron (III) ABC transporter, periplasmic iron-bindin gprotein 1466 41.04 0 1629651..1630247 + 198 208435442 - HPG27_1500 - alkylhydroperoxide reductase 1467 38.65 0 1630282..1631202 + 306 208435443 - HPG27_1501 - putative outer membrane lipoprotein 1468 41.31 0 1631701..1633443 - 580 208435444 - HPG27_1502 - penicillin-binding protein 2 1469 31.98 -1 1633448..1633891 - 147 208435445 - HPG27_1503 - hypothetical protein 1470 38.28 0 1633903..1634529 - 208 208435446 - HPG27_1504 - conserved hypothetical GTP-binding protein 1471 40.50 0 1634526..1635083 - 185 208435447 - HPG27_1505 - hypothetical protein 1472 36.07 0 1635083..1635631 - 182 208435448 - HPG27_1506 - hypothetical protein 1473 42.22 0 1635651..1636145 - 164 208435449 - HPG27_1507 - ABC transporter system inner membrane protein 1474 41.46 0 1636142..1637089 - 315 208435450 rlpA HPG27_1508 - rare lipoprotein A 1475 39.26 0 1637089..1638201 - 370 208435451 - HPG27_1509 - regulatory protein DniR 1476 39.87 0 1638295..1639059 - 254 208435452 - HPG27_1510 - DNAse 1477 39.94 0 1639134..1639754 + 206 208435453 - HPG27_1511 - riboflavin synthase alpha subunit 1478 44.32 +1 1639755..1640027 + 90 208435454 - HPG27_1512 - FlhB-related flagellar biosynthesis protein 1479 40.14 0 1640049..1641032 + 327 208435455 - HPG27_1513 - ABC transporter, ATP-binding protein 1480 40.90 0 1641034..1641681 + 215 208435456 - HPG27_1514 - ABC transporter, permease protein 1481 37.09 0 1641713..1642831 - 372 208435457 - HPG27_1515 - putative lipopolysaccharide biosynthesis protein 1482 34.50 -1 1642880..1643308 - 142 208435458 - HPG27_1516 - hypothetical protein 1483 47.91 +2 1643318..1643914 - 198 208435459 - HPG27_1517 - hypothetical protein 1484 40.12 0 1643911..1644912 - 333 208435460 - HPG27_1518 - undecaprenylphosphate N-acetylglucosaminyl transferase 1485 38.02 0 1645057..1645845 + 262 208435461 - HPG27_1519 - pyridoxal phosphate biosynthetic protein J 1486 41.88 0 1645847..1646770 + 307 208435462 - HPG27_1520 - pyridoxal phosphate biosynthetic protein A 1487 40.27 0 1646834..1647856 + 340 208435463 - HPG27_1521 - sialoglycoprotease 1488 27.78 -2 1648464..1648661 + 65 208435464 - HPG27_1522 - hypothetical protein 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0