version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1343 41.99 0 1485406..1487658 + 750 208435319 homD HPG27_1374 - outer membrane protein 1344 38.97 0 1487675..1487869 - 64 208435320 - HPG27_1375 - hypothetical protein 1345 46.30 +1 1487928..1488089 - 53 208435321 - HPG27_1376 - hypothetical protein 1346 39.25 0 1488480..1489391 - 303 208435322 - HPG27_1377 - hypothetical protein 1347 41.45 0 1489400..1489744 - 114 208435323 - HPG27_1378 - hypothetical protein 1348 39.77 0 1489752..1490279 - 175 208435324 - HPG27_1379 - membrane-associated lipoprotein 1349 42.02 0 1490303..1490935 - 210 208435325 - HPG27_1380 - hypothetical protein 1350 40.95 0 1491352..1491666 - 104 208435326 - HPG27_1381 - thioredoxin 1351 41.73 0 1491721..1492494 - 257 208435327 - HPG27_1382 - ribosomal large subunit pseudouridinesynthase B 1352 41.94 0 1492491..1496126 - 1211 208435328 - HPG27_1383 - DNA polymerase III alpha-subunit 1353 41.79 0 1496274..1497326 + 350 208435329 - HPG27_1384 - cytochrome c551 peroxidase 1354 36.90 0 1497506..1498093 - 195 208435330 - HPG27_1385 - putative secreted motility protein 1355 40.56 0 1498112..1498789 - 225 208435331 - HPG27_1386 - hypothetical protein 1356 40.30 0 1498792..1499595 - 267 208435332 - HPG27_1387 - ABC transport system substrate binding protein 1357 43.00 +1 1499592..1500377 - 261 208435333 - HPG27_1388 - ABC transporter ATP-binding protein 1358 40.48 0 1500377..1501510 - 377 208435334 - HPG27_1389 - ABC transport system permease 1359 40.37 0 1501644..1502339 + 231 208435335 - HPG27_1390 - outer membrane protein 1360 45.65 +1 1502344..1503366 - 340 208435336 - HPG27_1391 - branched-chain-amino-acid aminotransferase 1361 42.84 0 1503418..1504164 - 248 208435337 horJ HPG27_1392 - outer membrane protein 1362 39.18 0 1504279..1506996 - 905 208435338 polA HPG27_1393 - DNA polymerase I 1363 37.02 0 1507062..1508282 - 406 208435339 - HPG27_1394 - type II restriction enzyme 1364 38.04 0 1508279..1510318 - 679 208435340 - HPG27_1395 - restriction enzyme BcgI alpha chain-like protein 1365 41.76 0 1510351..1510908 - 185 208435341 - HPG27_1396 - hypothetical protein 1366 39.76 0 1510914..1511489 - 191 208435342 - HPG27_1397 - thymidylate kinase 1367 40.93 0 1511491..1511964 - 157 208435343 - HPG27_1398 - lipopolysaccharide core biosynthesis protein 1368 44.86 +1 1511964..1512527 - 187 208435344 - HPG27_1399 - aromatic acid decarboxylase 1369 38.66 0 1512537..1513193 - 218 208435345 - HPG27_1400 - hypothetical protein 1370 39.97 0 1513190..1515238 - 682 208435346 uvrD HPG27_1401 - DNA helicase II 1371 39.80 0 1515235..1517769 - 844 208435347 - HPG27_1402 - hypothetical protein 1372 41.59 0 1517779..1519026 - 415 208435348 - HPG27_1403 - seryl-tRNA synthetase 1373 41.10 0 1519027..1519824 - 265 208435349 - HPG27_1404 - hypothetical protein 1374 37.55 0 1519828..1520088 - 86 208435350 - HPG27_1405 - exodeoxyribonuclease VII small subunit 1375 39.14 0 1520098..1520838 - 246 208435351 - HPG27_1406 - methyl transferase 1376 38.48 0 1520865..1521311 - 148 208435352 - HPG27_1407 - hypothetical protein 1377 40.28 0 1521322..1521825 - 167 208435353 - HPG27_1408 - hypothetical protein 1378 39.17 0 1521881..1523011 - 376 208435354 - HPG27_1409 - hypothetical protein 1379 39.53 0 1523008..1524105 - 365 208435355 - HPG27_1410 - hypothetical protein 1380 44.34 +1 1524117..1525106 - 329 208435356 - HPG27_1411 - conserved hypothetical secreted protein 1381 40.44 0 1525117..1526649 - 510 208435357 - HPG27_1412 - lipase-like protein 1382 42.70 0 1526646..1527947 - 433 208435358 - HPG27_1413 - putative integral membrane protein with a TlyC-like hemolysin domain 1383 43.01 +1 1528099..1529700 - 533 208435359 - HPG27_1414 - phosphate permease 1384 38.52 0 1529841..1530110 + 89 208435360 - HPG27_1415 - conserved hypothetical nifU-like protein 1385 36.44 0 1530122..1530733 + 203 208435361 - HPG27_1416 - hypothetical protein 1386 37.87 0 1530737..1532080 + 447 208435362 - HPG27_1417 - UDP-MurNac-tripeptide synthetase 1387 37.96 0 1532084..1533034 + 316 208435363 - HPG27_1418 - transaldolase 1388 38.55 0 1533089..1533625 + 178 208435364 rplY HPG27_1419 - ribosomal protein L25 1389 38.15 0 1533635..1534195 + 186 208435365 - HPG27_1420 - peptidyl-tRNA hydrolase 1390 38.20 0 1534205..1535272 + 355 208435366 - HPG27_1421 - hypothetical protein 1391 31.24 -2 1535329..1536330 + 333 208435367 - HPG27_1422 - type II methylase 1392 27.67 -2 1536327..1537226 + 299 208435368 - HPG27_1423 - type II adenine specific DNA methyltransferase 1393 43.32 +1 1538902..1540032 - 376 208435369 hopK-3 HPG27_1425 - outer membrane protein 1394 36.99 0 1540247..1540684 + 145 208435370 - HPG27_1426 - hypothetical protein 1395 38.45 0 1543057..1543584 - 175 208435371 - HPG27_1428 - hypothetical protein 1396 39.71 0 1543755..1544789 - 344 208435372 - HPG27_1429 - riboflavin biosynthesis protein 1397 43.36 +1 1544793..1546019 - 408 208435373 gltS HPG27_1430 - sodium/glutamate symport carrier protein/glutamate permease 1398 40.94 0 1546162..1547304 + 380 208435374 - HPG27_1431 - hypothetical protein 1399 41.68 0 1547314..1548690 - 458 208435375 - HPG27_1432 - ferrodoxin-like protein 1400 40.26 0 1548766..1549458 + 230 208435376 - HPG27_1433 - hypothetical protein 1401 35.31 -1 1549455..1549808 + 117 208435377 - HPG27_1434 - dihydroneopterin aldolase 1402 39.58 0 1549831..1550118 + 95 208435378 - HPG27_1435 - FrpB-like protein 1403 45.08 +1 1550272..1552911 + 879 208435379 - HPG27_1436 - iron-regulated outer membrane protein 1404 38.16 0 1553139..1554299 + 386 208435380 - HPG27_1437 - seleno cysteine synthase 1405 40.15 0 1554401..1555588 + 395 208435381 - HPG27_1438 - transcription termination factor 1406 29.40 -2 1555810..1556520 - 236 208435382 - HPG27_1439 - hypothetical protein 1407 33.11 -1 1556561..1556998 - 145 208435383 - HPG27_1440 - hypothetical protein 1408 33.25 -1 1557796..1561350 - 1184 208435384 - HPG27_1441 - type II S restriction-modification protein 1409 38.78 0 1564374..1564961 - 195 208435385 - HPG27_1443 - type III R-M system modification enzyme 1410 32.97 -1 1564966..1566351 - 461 208435386 - HPG27_1444 - type III R-M system modification enzyme 1411 37.50 0 1566402..1568273 - 623 208435387 recG HPG27_1445 - DNA recombinase 1412 31.92 -1 1568355..1568708 + 117 208435388 - HPG27_1446 - hypothetical protein 1413 40.64 0 1568813..1569346 + 177 208435389 - HPG27_1447 - hypothetical protein 1414 38.38 0 1569343..1570095 - 250 208435390 - HPG27_1448 - exodeoxyribonuclease 1415 39.58 0 1570275..1571714 - 479 208435391 comH HPG27_1449 - periplasmic competence protein 1416 39.55 0 1571935..1573302 - 455 208435392 dnaA HPG27_1450 - chromosomal replication initiator protein 1417 37.38 0 1573454..1573996 + 180 208435393 - HPG27_1451 - purine nucleoside phosphorylase 1418 35.83 0 1574032..1574271 + 79 208435394 - HPG27_1452 - hypothetical protein 1419 40.80 0 1574272..1576065 + 597 208435395 - HPG27_1453 - glutamine fructose-6-phosphate aminotransferase 1420 39.39 0 1576089..1576715 + 208 208435396 - HPG27_1454 - thymidylate synthase 1421 32.55 -1 1576971..1577609 - 212 208435397 - HPG27_1455 - typeI R-M system specificity subunit 1422 38.12 0 1577620..1580064 - 814 208435398 - HPG27_1456 - typeI restriction enzyme M protein 1423 36.42 0 1580134..1583109 + 991 208435399 - HPG27_1457 - typeI restriction enzyme R protein 1424 37.01 0 1583109..1583816 + 235 208435400 - HPG27_1458 - hypothetical protein 1425 46.24 +1 1583885..1586410 - 841 208435401 - HPG27_1459 - iron (III) dicitrate transport protein 1426 39.32 0 1586762..1587730 - 322 208435402 rocF HPG27_1460 - arginase 1427 45.14 +1 1587935..1589077 + 380 208435403 - HPG27_1461 - alanine dehydrogenase 1428 35.83 0 1589200..1590921 + 573 208435404 - HPG27_1462 - hypothetical protein 1429 42.66 0 1590932..1591660 - 242 208435405 horL HPG27_1463 - outer membrane protein 1430 20.24 -2 1591657..1591824 - 55 208435406 - HPG27_1464 - hypothetical protein 1431 41.17 0 1591846..1592700 + 284 208435407 - HPG27_1465 - inorganic polyphosphate/ATP-NAD kinase 1432 40.06 0 1592714..1594288 + 524 208435408 recN HPG27_1466 - DNA repair protein 1433 33.03 -1 1594285..1595592 + 435 208435409 - HPG27_1467 - fibronectin/fibrinogen-binding protein 1434 41.75 0 1595612..1595908 + 98 208435410 - HPG27_1468 - hypothetical protein 1435 35.77 0 1596046..1597029 + 327 208435411 - HPG27_1469 - cysteine-rich protein C 1436 39.75 0 1597068..1597862 - 264 208435412 polC HPG27_1470 - DNA polymerase III epsilon subunit 1437 43.27 +1 1597909..1598562 - 217 208435413 - HPG27_1471 - D-ribulose-5-phosphate 3 epimerase 1438 37.57 0 1598633..1599505 + 290 208435414 - HPG27_1472 - fructose-1,6-bisphosphatase 1439 39.71 0 1599505..1599708 + 67 208435415 - HPG27_1473 - hypothetical protein 1440 35.23 -1 1599721..1600617 + 298 208435416 - HPG27_1474 - putative type II methylase protein 1441 34.31 -1 1600622..1601341 + 239 208435417 - HPG27_1475 - hypothetical protein 1442 43.82 +1 1601463..1602320 - 285 208435418 - HPG27_1476 - ubiquinol cytochrome c oxidoreductase, cytochrome c1 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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