version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1281 37.75 0 1411802..1413115 - 437 208435257 - HPG27_1309 - competence locus E 1282 40.90 0 1413112..1414578 - 488 208435258 dnaB HPG27_1310 - replicative DNA helicase 1283 40.83 0 1414589..1415989 - 466 208435259 - HPG27_1311 - hypothetical protein 1284 37.27 0 1415992..1417110 - 372 208435260 - HPG27_1312 - putative histidine kinase sensor protein 1285 38.79 0 1417160..1417801 - 213 208435261 - HPG27_1313 - response regulator 1286 35.43 0 1417870..1419297 + 475 208435262 - HPG27_1314 - type III restriction enzyme M protein 1287 39.11 0 1419432..1420331 + 299 208435263 - HPG27_1315 - adenine-specific DNA methylase 1288 34.88 -1 1420342..1423242 + 966 208435264 - HPG27_1316 - type III restriction enzyme R protein 1289 38.15 0 1423293..1424039 - 248 208435265 mreC HPG27_1317 - rod shape-determining protein 1290 47.13 +2 1424043..1425086 - 347 208435266 mreB HPG27_1318 - rod shape-determining protein 1291 40.68 0 1425129..1426475 - 448 208435267 - HPG27_1319 - ATP-dependent protease ATPase subunit 1292 42.44 0 1426477..1427289 - 270 208435268 - HPG27_1320 - UDP-N-acetylglucosamine acyltransferase 1293 42.29 0 1427292..1427771 - 159 208435269 - HPG27_1321 - (3R)-hydroxymyristoyl-(acylcarrierprotein) dehydratase 1294 41.58 0 1427942..1428244 - 100 208435270 - HPG27_1322 - hypothetical protein 1295 37.25 0 1428732..1429394 + 220 208435271 comL HPG27_1323 - competence lipoprotein 1296 41.44 0 1429437..1431914 + 825 208435272 - HPG27_1324 - ATP-dependent protease 1297 41.91 0 1431923..1432750 + 275 208435273 - HPG27_1325 - prephenate dehydrogenase 1298 37.38 0 1433078..1433941 - 287 208435274 - HPG27_1326 - putative endonuclease G 1299 32.59 -1 1434221..1435825 - 534 208435275 - HPG27_1327 - putative type III restriction enzyme M protein 1300 35.13 -1 1435927..1438266 - 779 208435276 - HPG27_1328 - putative type III restriction enzyme R protein 1301 44.17 +1 1438681..1439529 + 282 208435277 - HPG27_1329 - biotin synthetase 1302 36.52 0 1439529..1440407 + 292 208435278 - HPG27_1330 - putative ribonuclease N 1303 26.09 -2 1440460..1440666 - 68 208435279 - HPG27_1331 - hypothetical protein 1304 24.04 -2 1444716..1444898 - 60 208435280 - HPG27_1332 - hypothetical protein 1305 38.89 0 1445305..1445790 + 161 208435281 - HPG27_1333 - hypothetical protein 1306 36.83 0 1445790..1447589 + 599 208435282 - HPG27_1334 - hypothetical protein 1307 39.85 0 1447740..1448645 + 301 208435283 - HPG27_1335 - hypothetical protein 1308 40.04 0 1448758..1449204 - 148 208435284 - HPG27_1336 - hypothetical protein 1309 37.72 0 1449264..1449605 + 113 208435285 - HPG27_1337 - hypothetical protein 1310 38.03 0 1449676..1450506 + 276 208435286 - HPG27_1338 - tRNA delta(2)-isopentenyl pyrophosphate transferase 1311 38.22 0 1450511..1451614 + 367 208435287 - HPG27_1339 - lipopolysaccharide1,2-glucosyltransferase 1312 41.15 0 1453342..1454121 - 259 208435288 - HPG27_1341 - UDP-N-acetylenolpyruvoyl glucosamine reductase 1313 38.95 0 1454125..1454391 - 88 208435289 fliQ HPG27_1342 - flagellar biosynthetic protein 1314 45.36 +1 1454402..1455706 - 434 208435290 fliI HPG27_1343 - flagellum-specific ATP synthase 1315 43.28 +1 1455707..1456621 - 304 208435291 - HPG27_1344 - type IV secretion system ATPase 1316 40.17 0 1456638..1459400 - 920 208435292 - HPG27_1345 - isoleucyl-tRNA synthetase 1317 40.39 0 1459425..1459679 - 84 208435293 - HPG27_1346 - hypothetical protein 1318 42.90 +1 1459781..1460407 + 208 208435294 - HPG27_1347 - hypothetical protein 1319 51.35 +2 1460456..1460677 - 73 208435295 - HPG27_1348 - hypothetical protein 1320 38.64 0 1460831..1461904 - 357 208435296 - HPG27_1349 - hypothetical protein 1321 43.05 +1 1461901..1462734 - 277 208435297 - HPG27_1350 - polysialicacid capsule expression protein 1322 43.04 +1 1462874..1464943 - 689 208435298 - HPG27_1351 - ATP/GTP binding protein 1323 39.71 0 1464983..1465798 - 271 208435299 - HPG27_1352 - 16S rRNA (adenosine-N6,N6-)-dimethyltransferase 1324 48.06 +2 1466062..1466319 + 85 208435300 - HPG27_1353 - hypothetical protein 1325 39.80 0 1469369..1470250 - 293 208435301 - HPG27_1355 - formyl tetrahydrofolate hydrolase 1326 40.84 0 1470253..1471131 - 292 208435302 - HPG27_1356 - signal peptide protease IV 1327 37.80 0 1471202..1471447 + 81 208435303 - HPG27_1357 - hypothetical protein 1328 34.37 -1 1471686..1472363 + 225 208435304 - HPG27_1358 - hypothetical protein 1329 38.12 0 1472372..1472851 + 159 208435305 - HPG27_1359 - conserved hypothetical lipoprotein 1330 37.82 0 1472862..1473329 + 155 208435306 - HPG27_1360 - hypothetical protein 1331 33.92 -1 1473895..1474236 - 113 208435307 - HPG27_1361 - hypothetical protein 1332 39.16 0 1476630..1477418 - 262 208435308 - HPG27_1362 - hypothetical protein 1333 45.81 +1 1477542..1478030 + 162 208435309 - HPG27_1363 - peptidyl-prolylcis-transisomeraseB, cyclosporin- type rotamase 1334 42.86 0 1478048..1478278 + 76 208435310 - HPG27_1364 - carbon storage regulator 1335 39.68 0 1478278..1479081 + 267 208435311 - HPG27_1365 - 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase 1336 31.81 -1 1479078..1479536 + 152 208435312 - HPG27_1366 - SsrA-binding protein 1337 41.94 0 1479539..1479991 + 150 208435313 - HPG27_1367 - biopolymer transport protein 1338 34.83 -1 1480002..1480403 + 133 208435314 - HPG27_1368 - biopolymer transport protein 1339 43.33 +1 1481064..1481393 + 109 208435315 - HPG27_1370 - hypothetical protein 1340 40.50 0 1481399..1483045 + 548 208435316 - HPG27_1371 - 60 kDa inner-membrane protein 1341 36.59 0 1483045..1483842 + 265 208435317 - HPG27_1372 - hypothetical protein 1342 38.35 0 1483973..1485187 + 404 208435318 - HPG27_1373 - putative thiophene/furanoxidation protein 1343 41.99 0 1485406..1487658 + 750 208435319 homD HPG27_1374 - outer membrane protein 1344 38.97 0 1487675..1487869 - 64 208435320 - HPG27_1375 - hypothetical protein 1345 46.30 +1 1487928..1488089 - 53 208435321 - HPG27_1376 - hypothetical protein 1346 39.25 0 1488480..1489391 - 303 208435322 - HPG27_1377 - hypothetical protein 1347 41.45 0 1489400..1489744 - 114 208435323 - HPG27_1378 - hypothetical protein 1348 39.77 0 1489752..1490279 - 175 208435324 - HPG27_1379 - membrane-associated lipoprotein 1349 42.02 0 1490303..1490935 - 210 208435325 - HPG27_1380 - hypothetical protein 1350 40.95 0 1491352..1491666 - 104 208435326 - HPG27_1381 - thioredoxin 1351 41.73 0 1491721..1492494 - 257 208435327 - HPG27_1382 - ribosomal large subunit pseudouridinesynthase B 1352 41.94 0 1492491..1496126 - 1211 208435328 - HPG27_1383 - DNA polymerase III alpha-subunit 1353 41.79 0 1496274..1497326 + 350 208435329 - HPG27_1384 - cytochrome c551 peroxidase 1354 36.90 0 1497506..1498093 - 195 208435330 - HPG27_1385 - putative secreted motility protein 1355 40.56 0 1498112..1498789 - 225 208435331 - HPG27_1386 - hypothetical protein 1356 40.30 0 1498792..1499595 - 267 208435332 - HPG27_1387 - ABC transport system substrate binding protein 1357 43.00 +1 1499592..1500377 - 261 208435333 - HPG27_1388 - ABC transporter ATP-binding protein 1358 40.48 0 1500377..1501510 - 377 208435334 - HPG27_1389 - ABC transport system permease 1359 40.37 0 1501644..1502339 + 231 208435335 - HPG27_1390 - outer membrane protein 1360 45.65 +1 1502344..1503366 - 340 208435336 - HPG27_1391 - branched-chain-amino-acid aminotransferase 1361 42.84 0 1503418..1504164 - 248 208435337 horJ HPG27_1392 - outer membrane protein 1362 39.18 0 1504279..1506996 - 905 208435338 polA HPG27_1393 - DNA polymerase I 1363 37.02 0 1507062..1508282 - 406 208435339 - HPG27_1394 - type II restriction enzyme 1364 38.04 0 1508279..1510318 - 679 208435340 - HPG27_1395 - restriction enzyme BcgI alpha chain-like protein 1365 41.76 0 1510351..1510908 - 185 208435341 - HPG27_1396 - hypothetical protein 1366 39.76 0 1510914..1511489 - 191 208435342 - HPG27_1397 - thymidylate kinase 1367 40.93 0 1511491..1511964 - 157 208435343 - HPG27_1398 - lipopolysaccharide core biosynthesis protein 1368 44.86 +1 1511964..1512527 - 187 208435344 - HPG27_1399 - aromatic acid decarboxylase 1369 38.66 0 1512537..1513193 - 218 208435345 - HPG27_1400 - hypothetical protein 1370 39.97 0 1513190..1515238 - 682 208435346 uvrD HPG27_1401 - DNA helicase II 1371 39.80 0 1515235..1517769 - 844 208435347 - HPG27_1402 - hypothetical protein 1372 41.59 0 1517779..1519026 - 415 208435348 - HPG27_1403 - seryl-tRNA synthetase 1373 41.10 0 1519027..1519824 - 265 208435349 - HPG27_1404 - hypothetical protein 1374 37.55 0 1519828..1520088 - 86 208435350 - HPG27_1405 - exodeoxyribonuclease VII small subunit 1375 39.14 0 1520098..1520838 - 246 208435351 - HPG27_1406 - methyl transferase 1376 38.48 0 1520865..1521311 - 148 208435352 - HPG27_1407 - hypothetical protein 1377 40.28 0 1521322..1521825 - 167 208435353 - HPG27_1408 - hypothetical protein 1378 39.17 0 1521881..1523011 - 376 208435354 - HPG27_1409 - hypothetical protein 1379 39.53 0 1523008..1524105 - 365 208435355 - HPG27_1410 - hypothetical protein 1380 44.34 +1 1524117..1525106 - 329 208435356 - HPG27_1411 - conserved hypothetical secreted protein 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0