version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1254 34.09 -1 1387124..1387786 + 220 208435230 - HPG27_1282 - hypothetical protein 1255 39.55 0 1387850..1388878 - 342 208435231 - HPG27_1283 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1256 38.98 0 1389016..1389777 + 253 208435232 - HPG27_1284 - hypothetical protein 1257 40.51 0 1389774..1390163 - 129 208435233 - HPG27_1285 - nicotinate-nucleotide adenyltransferase 1258 40.72 0 1390282..1390728 - 148 208435234 - HPG27_1286 - nickel uptake regulation protein 1259 39.73 0 1391051..1391488 + 145 208435235 - HPG27_1287 - biopolymer transport protein 1260 38.21 0 1391485..1391874 + 129 208435236 - HPG27_1288 - biopolymer transport protein 1261 41.80 0 1391966..1392697 + 243 208435237 - HPG27_1289 - siderophore-mediated iron transport protein 1262 39.63 0 1392974..1393354 + 126 208435238 - HPG27_1290 - outer membrane protein 1263 38.41 0 1393498..1394226 - 242 208435239 - HPG27_1291 - hypothetical protein 1264 37.20 0 1394232..1395188 - 318 208435240 - HPG27_1292 - magnesium and cobalt transport protein 1265 41.60 0 1395204..1396412 - 402 208435241 - HPG27_1293 - phosphoglycerate kinase 1266 42.80 0 1396428..1397420 - 330 208435242 gapB HPG27_1294 - glyceraldehyde-3-phosphate dehydrogenase 1267 42.59 0 1397509..1398210 - 233 208435243 - HPG27_1295 - uracil-DNA glycosylase 1268 41.18 0 1398207..1398869 - 220 208435244 - HPG27_1296 - 1-acyl-glycerol-3-phosphate acyl transferase 1269 37.63 0 1398907..1400022 - 371 208435245 - HPG27_1297 - hypothetical protein 1270 42.42 0 1400086..1401450 - 454 208435246 - HPG27_1298 - carboxyl-terminal protease 1271 33.06 -1 1401672..1402394 - 240 208435247 - HPG27_1299 - type II restriction endonuclease 1272 29.41 -2 1402391..1402543 - 50 208435248 - HPG27_1300 - hypothetical protein 1273 33.15 -1 1402544..1403623 - 359 208435249 - HPG27_1301 - adenine specific DNA methyltransferase 1274 38.56 0 1403873..1407241 - 1122 208435250 - HPG27_1302 - adenine specific DNA methyltransferase 1275 40.63 0 1407266..1408087 - 273 208435251 - HPG27_1303 - nicotinate-nucleotide pyrophosphorylase 1276 40.80 0 1408087..1409064 - 325 208435252 - HPG27_1304 - quinolinate synthetase A 1277 38.98 0 1409087..1409848 - 253 208435253 - HPG27_1305 - phosphatidyl serine decarboxylase proenzyme 1278 34.71 -1 1409884..1410390 - 168 208435254 - HPG27_1306 - hypothetical protein 1279 36.47 0 1410403..1410912 - 169 208435255 - HPG27_1307 - hypothetical protein 1280 41.78 0 1410912..1411775 - 287 208435256 - HPG27_1308 - 4-hydroxybenzoate octaprenyl transferase 1281 37.75 0 1411802..1413115 - 437 208435257 - HPG27_1309 - competence locus E 1282 40.90 0 1413112..1414578 - 488 208435258 dnaB HPG27_1310 - replicative DNA helicase 1283 40.83 0 1414589..1415989 - 466 208435259 - HPG27_1311 - hypothetical protein 1284 37.27 0 1415992..1417110 - 372 208435260 - HPG27_1312 - putative histidine kinase sensor protein 1285 38.79 0 1417160..1417801 - 213 208435261 - HPG27_1313 - response regulator 1286 35.43 0 1417870..1419297 + 475 208435262 - HPG27_1314 - type III restriction enzyme M protein 1287 39.11 0 1419432..1420331 + 299 208435263 - HPG27_1315 - adenine-specific DNA methylase 1288 34.88 -1 1420342..1423242 + 966 208435264 - HPG27_1316 - type III restriction enzyme R protein 1289 38.15 0 1423293..1424039 - 248 208435265 mreC HPG27_1317 - rod shape-determining protein 1290 47.13 +2 1424043..1425086 - 347 208435266 mreB HPG27_1318 - rod shape-determining protein 1291 40.68 0 1425129..1426475 - 448 208435267 - HPG27_1319 - ATP-dependent protease ATPase subunit 1292 42.44 0 1426477..1427289 - 270 208435268 - HPG27_1320 - UDP-N-acetylglucosamine acyltransferase 1293 42.29 0 1427292..1427771 - 159 208435269 - HPG27_1321 - (3R)-hydroxymyristoyl-(acylcarrierprotein) dehydratase 1294 41.58 0 1427942..1428244 - 100 208435270 - HPG27_1322 - hypothetical protein 1295 37.25 0 1428732..1429394 + 220 208435271 comL HPG27_1323 - competence lipoprotein 1296 41.44 0 1429437..1431914 + 825 208435272 - HPG27_1324 - ATP-dependent protease 1297 41.91 0 1431923..1432750 + 275 208435273 - HPG27_1325 - prephenate dehydrogenase 1298 37.38 0 1433078..1433941 - 287 208435274 - HPG27_1326 - putative endonuclease G 1299 32.59 -1 1434221..1435825 - 534 208435275 - HPG27_1327 - putative type III restriction enzyme M protein 1300 35.13 -1 1435927..1438266 - 779 208435276 - HPG27_1328 - putative type III restriction enzyme R protein 1301 44.17 +1 1438681..1439529 + 282 208435277 - HPG27_1329 - biotin synthetase 1302 36.52 0 1439529..1440407 + 292 208435278 - HPG27_1330 - putative ribonuclease N 1303 26.09 -2 1440460..1440666 - 68 208435279 - HPG27_1331 - hypothetical protein 1304 24.04 -2 1444716..1444898 - 60 208435280 - HPG27_1332 - hypothetical protein 1305 38.89 0 1445305..1445790 + 161 208435281 - HPG27_1333 - hypothetical protein 1306 36.83 0 1445790..1447589 + 599 208435282 - HPG27_1334 - hypothetical protein 1307 39.85 0 1447740..1448645 + 301 208435283 - HPG27_1335 - hypothetical protein 1308 40.04 0 1448758..1449204 - 148 208435284 - HPG27_1336 - hypothetical protein 1309 37.72 0 1449264..1449605 + 113 208435285 - HPG27_1337 - hypothetical protein 1310 38.03 0 1449676..1450506 + 276 208435286 - HPG27_1338 - tRNA delta(2)-isopentenyl pyrophosphate transferase 1311 38.22 0 1450511..1451614 + 367 208435287 - HPG27_1339 - lipopolysaccharide1,2-glucosyltransferase 1312 41.15 0 1453342..1454121 - 259 208435288 - HPG27_1341 - UDP-N-acetylenolpyruvoyl glucosamine reductase 1313 38.95 0 1454125..1454391 - 88 208435289 fliQ HPG27_1342 - flagellar biosynthetic protein 1314 45.36 +1 1454402..1455706 - 434 208435290 fliI HPG27_1343 - flagellum-specific ATP synthase 1315 43.28 +1 1455707..1456621 - 304 208435291 - HPG27_1344 - type IV secretion system ATPase 1316 40.17 0 1456638..1459400 - 920 208435292 - HPG27_1345 - isoleucyl-tRNA synthetase 1317 40.39 0 1459425..1459679 - 84 208435293 - HPG27_1346 - hypothetical protein 1318 42.90 +1 1459781..1460407 + 208 208435294 - HPG27_1347 - hypothetical protein 1319 51.35 +2 1460456..1460677 - 73 208435295 - HPG27_1348 - hypothetical protein 1320 38.64 0 1460831..1461904 - 357 208435296 - HPG27_1349 - hypothetical protein 1321 43.05 +1 1461901..1462734 - 277 208435297 - HPG27_1350 - polysialicacid capsule expression protein 1322 43.04 +1 1462874..1464943 - 689 208435298 - HPG27_1351 - ATP/GTP binding protein 1323 39.71 0 1464983..1465798 - 271 208435299 - HPG27_1352 - 16S rRNA (adenosine-N6,N6-)-dimethyltransferase 1324 48.06 +2 1466062..1466319 + 85 208435300 - HPG27_1353 - hypothetical protein 1325 39.80 0 1469369..1470250 - 293 208435301 - HPG27_1355 - formyl tetrahydrofolate hydrolase 1326 40.84 0 1470253..1471131 - 292 208435302 - HPG27_1356 - signal peptide protease IV 1327 37.80 0 1471202..1471447 + 81 208435303 - HPG27_1357 - hypothetical protein 1328 34.37 -1 1471686..1472363 + 225 208435304 - HPG27_1358 - hypothetical protein 1329 38.12 0 1472372..1472851 + 159 208435305 - HPG27_1359 - conserved hypothetical lipoprotein 1330 37.82 0 1472862..1473329 + 155 208435306 - HPG27_1360 - hypothetical protein 1331 33.92 -1 1473895..1474236 - 113 208435307 - HPG27_1361 - hypothetical protein 1332 39.16 0 1476630..1477418 - 262 208435308 - HPG27_1362 - hypothetical protein 1333 45.81 +1 1477542..1478030 + 162 208435309 - HPG27_1363 - peptidyl-prolylcis-transisomeraseB, cyclosporin- type rotamase 1334 42.86 0 1478048..1478278 + 76 208435310 - HPG27_1364 - carbon storage regulator 1335 39.68 0 1478278..1479081 + 267 208435311 - HPG27_1365 - 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase 1336 31.81 -1 1479078..1479536 + 152 208435312 - HPG27_1366 - SsrA-binding protein 1337 41.94 0 1479539..1479991 + 150 208435313 - HPG27_1367 - biopolymer transport protein 1338 34.83 -1 1480002..1480403 + 133 208435314 - HPG27_1368 - biopolymer transport protein 1339 43.33 +1 1481064..1481393 + 109 208435315 - HPG27_1370 - hypothetical protein 1340 40.50 0 1481399..1483045 + 548 208435316 - HPG27_1371 - 60 kDa inner-membrane protein 1341 36.59 0 1483045..1483842 + 265 208435317 - HPG27_1372 - hypothetical protein 1342 38.35 0 1483973..1485187 + 404 208435318 - HPG27_1373 - putative thiophene/furanoxidation protein 1343 41.99 0 1485406..1487658 + 750 208435319 homD HPG27_1374 - outer membrane protein 1344 38.97 0 1487675..1487869 - 64 208435320 - HPG27_1375 - hypothetical protein 1345 46.30 +1 1487928..1488089 - 53 208435321 - HPG27_1376 - hypothetical protein 1346 39.25 0 1488480..1489391 - 303 208435322 - HPG27_1377 - hypothetical protein 1347 41.45 0 1489400..1489744 - 114 208435323 - HPG27_1378 - hypothetical protein 1348 39.77 0 1489752..1490279 - 175 208435324 - HPG27_1379 - membrane-associated lipoprotein 1349 42.02 0 1490303..1490935 - 210 208435325 - HPG27_1380 - hypothetical protein 1350 40.95 0 1491352..1491666 - 104 208435326 - HPG27_1381 - thioredoxin 1351 41.73 0 1491721..1492494 - 257 208435327 - HPG27_1382 - ribosomal large subunit pseudouridinesynthase B 1352 41.94 0 1492491..1496126 - 1211 208435328 - HPG27_1383 - DNA polymerase III alpha-subunit 1353 41.79 0 1496274..1497326 + 350 208435329 - HPG27_1384 - cytochrome c551 peroxidase 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0