version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1226 37.63 0 1366554..1366949 - 131 208435202 rpsH HPG27_1254 - ribosomal protein S8 1227 43.55 +1 1366959..1367144 - 61 208435203 - HPG27_1255 - ribosomal protein S14 1228 39.93 0 1367154..1367699 - 181 208435204 rplE HPG27_1256 - ribosomal protein L5 1229 43.08 +1 1367712..1367906 - 64 208435205 rplX HPG27_1257 - ribosomal protein L24 1230 44.17 +1 1367934..1368302 - 122 208435206 rplN HPG27_1258 - ribosomal protein L14 1231 37.93 0 1368305..1368565 - 86 208435207 rpsQ HPG27_1259 - ribosomal protein S17 1232 38.17 0 1368579..1368764 - 61 208435208 rpmC HPG27_1260 - ribosomal protein L29 1233 42.25 0 1368766..1369191 - 141 208435209 rplP HPG27_1261 - ribosomal protein L16 1234 44.54 +1 1369194..1369898 - 234 208435210 rpsC HPG27_1262 - ribosomal protein S3 1235 44.44 +1 1369902..1370270 - 122 208435211 rplV HPG27_1263 - ribosomal protein L22 1236 39.01 0 1370280..1370561 - 93 208435212 rpsS HPG27_1264 - ribosomal protein S19 1237 47.05 +2 1370572..1371402 - 276 208435213 rplB HPG27_1265 - ribosomal protein L2 1238 39.01 0 1371418..1371699 - 93 208435214 rplW HPG27_1266 - ribosomal protein L23 1239 43.06 +1 1371703..1372350 - 215 208435215 rplD HPG27_1267 - ribosomal protein L4 1240 45.83 +1 1372385..1372960 - 191 208435216 rplC HPG27_1268 - ribosomal protein L3 1241 45.08 +1 1372997..1373311 - 104 208435217 rpsJ HPG27_1269 - ribosomal protein S10 1242 38.20 0 1373521..1374609 + 362 208435218 - HPG27_1270 - conserved hypothetical ATP-binding protein 1243 40.76 0 1374851..1375429 + 192 208435219 - HPG27_1271 - hypothetical protein 1244 42.93 +1 1375403..1376017 - 204 208435220 - HPG27_1272 - ribonuclease HII 1245 44.32 +1 1376190..1377581 - 463 208435221 - HPG27_1273 - fumerase 1246 42.86 0 1377756..1378133 + 125 208435222 - HPG27_1274 - hypothetical protein 1247 34.35 -1 1378198..1379376 + 392 208435223 - HPG27_1275 - hypothetical protein 1248 38.00 0 1379373..1380380 + 335 208435224 - HPG27_1276 - cation efflux system protein 1249 41.65 0 1380381..1383494 + 1037 208435225 - HPG27_1277 - cation efflux system protein 1250 38.01 0 1383497..1383838 - 113 208435226 - HPG27_1278 - branched-chain amino acid transport protein 1251 41.19 0 1383838..1384524 - 228 208435227 - HPG27_1279 - branched-chain amino acid transport protein 1252 41.80 0 1384535..1385644 - 369 208435228 dnaJ HPG27_1280 - co-chaperone and heat shock protein 1253 37.05 0 1385768..1386898 + 376 208435229 - HPG27_1281 - hypothetical protein 1254 34.09 -1 1387124..1387786 + 220 208435230 - HPG27_1282 - hypothetical protein 1255 39.55 0 1387850..1388878 - 342 208435231 - HPG27_1283 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1256 38.98 0 1389016..1389777 + 253 208435232 - HPG27_1284 - hypothetical protein 1257 40.51 0 1389774..1390163 - 129 208435233 - HPG27_1285 - nicotinate-nucleotide adenyltransferase 1258 40.72 0 1390282..1390728 - 148 208435234 - HPG27_1286 - nickel uptake regulation protein 1259 39.73 0 1391051..1391488 + 145 208435235 - HPG27_1287 - biopolymer transport protein 1260 38.21 0 1391485..1391874 + 129 208435236 - HPG27_1288 - biopolymer transport protein 1261 41.80 0 1391966..1392697 + 243 208435237 - HPG27_1289 - siderophore-mediated iron transport protein 1262 39.63 0 1392974..1393354 + 126 208435238 - HPG27_1290 - outer membrane protein 1263 38.41 0 1393498..1394226 - 242 208435239 - HPG27_1291 - hypothetical protein 1264 37.20 0 1394232..1395188 - 318 208435240 - HPG27_1292 - magnesium and cobalt transport protein 1265 41.60 0 1395204..1396412 - 402 208435241 - HPG27_1293 - phosphoglycerate kinase 1266 42.80 0 1396428..1397420 - 330 208435242 gapB HPG27_1294 - glyceraldehyde-3-phosphate dehydrogenase 1267 42.59 0 1397509..1398210 - 233 208435243 - HPG27_1295 - uracil-DNA glycosylase 1268 41.18 0 1398207..1398869 - 220 208435244 - HPG27_1296 - 1-acyl-glycerol-3-phosphate acyl transferase 1269 37.63 0 1398907..1400022 - 371 208435245 - HPG27_1297 - hypothetical protein 1270 42.42 0 1400086..1401450 - 454 208435246 - HPG27_1298 - carboxyl-terminal protease 1271 33.06 -1 1401672..1402394 - 240 208435247 - HPG27_1299 - type II restriction endonuclease 1272 29.41 -2 1402391..1402543 - 50 208435248 - HPG27_1300 - hypothetical protein 1273 33.15 -1 1402544..1403623 - 359 208435249 - HPG27_1301 - adenine specific DNA methyltransferase 1274 38.56 0 1403873..1407241 - 1122 208435250 - HPG27_1302 - adenine specific DNA methyltransferase 1275 40.63 0 1407266..1408087 - 273 208435251 - HPG27_1303 - nicotinate-nucleotide pyrophosphorylase 1276 40.80 0 1408087..1409064 - 325 208435252 - HPG27_1304 - quinolinate synthetase A 1277 38.98 0 1409087..1409848 - 253 208435253 - HPG27_1305 - phosphatidyl serine decarboxylase proenzyme 1278 34.71 -1 1409884..1410390 - 168 208435254 - HPG27_1306 - hypothetical protein 1279 36.47 0 1410403..1410912 - 169 208435255 - HPG27_1307 - hypothetical protein 1280 41.78 0 1410912..1411775 - 287 208435256 - HPG27_1308 - 4-hydroxybenzoate octaprenyl transferase 1281 37.75 0 1411802..1413115 - 437 208435257 - HPG27_1309 - competence locus E 1282 40.90 0 1413112..1414578 - 488 208435258 dnaB HPG27_1310 - replicative DNA helicase 1283 40.83 0 1414589..1415989 - 466 208435259 - HPG27_1311 - hypothetical protein 1284 37.27 0 1415992..1417110 - 372 208435260 - HPG27_1312 - putative histidine kinase sensor protein 1285 38.79 0 1417160..1417801 - 213 208435261 - HPG27_1313 - response regulator 1286 35.43 0 1417870..1419297 + 475 208435262 - HPG27_1314 - type III restriction enzyme M protein 1287 39.11 0 1419432..1420331 + 299 208435263 - HPG27_1315 - adenine-specific DNA methylase 1288 34.88 -1 1420342..1423242 + 966 208435264 - HPG27_1316 - type III restriction enzyme R protein 1289 38.15 0 1423293..1424039 - 248 208435265 mreC HPG27_1317 - rod shape-determining protein 1290 47.13 +2 1424043..1425086 - 347 208435266 mreB HPG27_1318 - rod shape-determining protein 1291 40.68 0 1425129..1426475 - 448 208435267 - HPG27_1319 - ATP-dependent protease ATPase subunit 1292 42.44 0 1426477..1427289 - 270 208435268 - HPG27_1320 - UDP-N-acetylglucosamine acyltransferase 1293 42.29 0 1427292..1427771 - 159 208435269 - HPG27_1321 - (3R)-hydroxymyristoyl-(acylcarrierprotein) dehydratase 1294 41.58 0 1427942..1428244 - 100 208435270 - HPG27_1322 - hypothetical protein 1295 37.25 0 1428732..1429394 + 220 208435271 comL HPG27_1323 - competence lipoprotein 1296 41.44 0 1429437..1431914 + 825 208435272 - HPG27_1324 - ATP-dependent protease 1297 41.91 0 1431923..1432750 + 275 208435273 - HPG27_1325 - prephenate dehydrogenase 1298 37.38 0 1433078..1433941 - 287 208435274 - HPG27_1326 - putative endonuclease G 1299 32.59 -1 1434221..1435825 - 534 208435275 - HPG27_1327 - putative type III restriction enzyme M protein 1300 35.13 -1 1435927..1438266 - 779 208435276 - HPG27_1328 - putative type III restriction enzyme R protein 1301 44.17 +1 1438681..1439529 + 282 208435277 - HPG27_1329 - biotin synthetase 1302 36.52 0 1439529..1440407 + 292 208435278 - HPG27_1330 - putative ribonuclease N 1303 26.09 -2 1440460..1440666 - 68 208435279 - HPG27_1331 - hypothetical protein 1304 24.04 -2 1444716..1444898 - 60 208435280 - HPG27_1332 - hypothetical protein 1305 38.89 0 1445305..1445790 + 161 208435281 - HPG27_1333 - hypothetical protein 1306 36.83 0 1445790..1447589 + 599 208435282 - HPG27_1334 - hypothetical protein 1307 39.85 0 1447740..1448645 + 301 208435283 - HPG27_1335 - hypothetical protein 1308 40.04 0 1448758..1449204 - 148 208435284 - HPG27_1336 - hypothetical protein 1309 37.72 0 1449264..1449605 + 113 208435285 - HPG27_1337 - hypothetical protein 1310 38.03 0 1449676..1450506 + 276 208435286 - HPG27_1338 - tRNA delta(2)-isopentenyl pyrophosphate transferase 1311 38.22 0 1450511..1451614 + 367 208435287 - HPG27_1339 - lipopolysaccharide1,2-glucosyltransferase 1312 41.15 0 1453342..1454121 - 259 208435288 - HPG27_1341 - UDP-N-acetylenolpyruvoyl glucosamine reductase 1313 38.95 0 1454125..1454391 - 88 208435289 fliQ HPG27_1342 - flagellar biosynthetic protein 1314 45.36 +1 1454402..1455706 - 434 208435290 fliI HPG27_1343 - flagellum-specific ATP synthase 1315 43.28 +1 1455707..1456621 - 304 208435291 - HPG27_1344 - type IV secretion system ATPase 1316 40.17 0 1456638..1459400 - 920 208435292 - HPG27_1345 - isoleucyl-tRNA synthetase 1317 40.39 0 1459425..1459679 - 84 208435293 - HPG27_1346 - hypothetical protein 1318 42.90 +1 1459781..1460407 + 208 208435294 - HPG27_1347 - hypothetical protein 1319 51.35 +2 1460456..1460677 - 73 208435295 - HPG27_1348 - hypothetical protein 1320 38.64 0 1460831..1461904 - 357 208435296 - HPG27_1349 - hypothetical protein 1321 43.05 +1 1461901..1462734 - 277 208435297 - HPG27_1350 - polysialicacid capsule expression protein 1322 43.04 +1 1462874..1464943 - 689 208435298 - HPG27_1351 - ATP/GTP binding protein 1323 39.71 0 1464983..1465798 - 271 208435299 - HPG27_1352 - 16S rRNA (adenosine-N6,N6-)-dimethyltransferase 1324 48.06 +2 1466062..1466319 + 85 208435300 - HPG27_1353 - hypothetical protein 1325 39.80 0 1469369..1470250 - 293 208435301 - HPG27_1355 - formyl tetrahydrofolate hydrolase 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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