version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1174 40.68 0 1319597..1320154 + 185 208435150 - HPG27_1201 - ribosome releasing factor 1175 43.56 +1 1320158..1320763 + 201 208435151 - HPG27_1202 - orotate phosphoribosyl transferase 1176 39.44 0 1320825..1321217 + 130 208435152 - HPG27_1203 - hypothetical protein 1177 43.48 +1 1321214..1321903 + 229 208435153 - HPG27_1204 - NAD-dependent deacetylase 1178 38.06 0 1322011..1322412 + 133 208435154 - HPG27_1205 - NADH-ubiquinone oxidoreductase chain A 1179 46.67 +2 1322412..1322891 + 159 208435155 nuoB HPG27_1206 - NADH-ubiquinone oxidoreductase chain B 1180 41.23 0 1322891..1323688 + 265 208435156 nuoC HPG27_1207 - NADH-ubiquinone oxidoreductase chain C 1181 43.66 +1 1323690..1324919 + 409 208435157 nuoD HPG27_1208 - NADH-ubiquinone oxidoreductase chain D 1182 38.53 0 1324916..1325146 + 76 208435158 - HPG27_1209 - NADH-ubiquinone oxidoreductase chain E 1183 37.18 0 1325149..1326135 + 328 208435159 - HPG27_1210 - NADH-ubiquinone oxidoreductase chain F 1184 41.56 0 1326132..1328696 + 854 208435160 - HPG27_1211 - NADH-ubiquinone oxidoreductase chain G 1185 43.23 +1 1328693..1329682 + 329 208435161 - HPG27_1212 - NADH-ubiquinone oxidoreductase chain H 1186 44.95 +1 1329693..1330355 + 220 208435162 - HPG27_1213 - NADH-ubiquinone oxidoreductase chain I 1187 43.71 +1 1330396..1330896 + 166 208435163 nuoJ HPG27_1214 - NADH-ubiquinone oxidoreductase chain J 1188 39.93 0 1330893..1331195 + 100 208435164 nuoK HPG27_1215 - NADH-ubiquinone oxidoreductase chain K 1189 42.41 0 1331198..1333036 + 612 208435165 nuoL HPG27_1216 - NADH-ubiquinone oxidoreductase chain L 1190 42.99 +1 1334628..1336046 + 472 208435166 nuoN2 HPG27_1218 - NADH-ubiquinone oxidoreductase chain N 1191 38.55 0 1336066..1338441 + 791 208435167 - HPG27_1219 - paralysed flagella protein 1192 40.58 0 1338443..1339822 + 459 208435168 - HPG27_1220 - phosphomannomutase 1193 34.10 -1 1339999..1340259 + 86 208435169 - HPG27_1221 - hypothetical protein 1194 36.00 0 1340612..1340836 - 74 208435170 - HPG27_1222 - hypothetical protein 1195 41.44 0 1341065..1341853 - 262 208435171 - HPG27_1223 - tryptophansynthase, alpha subunit 1196 43.49 +1 1341850..1343031 - 393 208435172 - HPG27_1224 - tryptophansynthase, beta subunit 1197 36.81 0 1343033..1344382 - 449 208435173 - HPG27_1225 - N-(5'-phospho-ribosyl) anthranilate isomerase 1198 40.97 0 1344384..1345391 - 335 208435174 - HPG27_1226 - anthranilate phosphoribosyl transferase 1199 38.63 0 1345388..1345972 - 194 208435175 - HPG27_1227 - anthranilate synthasecomponent II. glutamineamido-transferase 1200 40.13 0 1345969..1347528 - 519 208435176 - HPG27_1228 - anthranilate synthase component I 1201 41.27 0 1347703..1347954 - 83 208435177 - HPG27_1229 - hypothetical protein 1202 37.69 0 1348125..1349387 + 420 208435178 - HPG27_1230 - hypothetical protein 1203 34.11 -1 1349606..1350511 - 301 208435179 - HPG27_1231 - type II adenine specific DNA methyltransferase 1204 31.24 -2 1350836..1351360 - 174 208435180 - HPG27_1232 - hypothetical protein 1205 41.07 0 1351455..1351622 - 55 208435181 - HPG27_1233 - adenine-specific DNA methylase 1206 41.01 0 1351624..1352001 - 125 208435182 - HPG27_1234 - adenine-specific DNA methylase 1207 35.60 0 1352064..1353521 - 485 208435183 - HPG27_1235 - hypothetical protein 1208 39.39 0 1353618..1354658 - 346 208435184 - HPG27_1236 - hypothetical protein 1209 38.38 0 1354726..1355418 - 230 208435185 - HPG27_1237 - acid phosphatase lipoprotein 1210 39.71 0 1355587..1356135 + 182 208435186 - HPG27_1238 - conserved hypothetical secreted protein 1211 36.83 0 1356723..1357379 + 218 208435187 - HPG27_1239 - putative transcriptional regulator 1212 36.65 0 1357501..1358163 + 220 208435188 - HPG27_1240 - nicotinamide mononucleotide transporter 1213 37.79 0 1358160..1358765 + 201 208435189 - HPG27_1241 - hypothetical protein 1214 45.58 +1 1359473..1359823 - 116 208435190 rplQ HPG27_1242 - ribosomal protein L17 1215 41.15 0 1359846..1360856 - 336 208435191 rpoA HPG27_1243 - DNA-directed RNA polymerase, alpha subunit 1216 43.86 +1 1360868..1361494 - 208 208435192 rpsD HPG27_1244 - ribosomal protein S4 1217 46.21 +1 1361504..1361899 - 131 208435193 rpsK HPG27_1245 - ribosomal protein S11 1218 40.77 0 1361922..1362284 - 120 208435194 rpsM HPG27_1246 - ribosomal protein S13 1219 42.01 0 1362479..1362697 - 72 208435195 - HPG27_1247 - translation initiation factor EF-1 1220 44.88 +1 1362697..1363458 - 253 208435196 - HPG27_1248 - methionine amino peptidase 1221 42.52 0 1363458..1364720 - 420 208435197 - HPG27_1249 - preprotein translocase subunit 1222 39.80 0 1364760..1365161 - 133 208435198 rplO HPG27_1250 - ribosomal protein L15 1223 45.05 +1 1365179..1365622 - 147 208435199 rpsE HPG27_1251 - ribosomal protein S5 1224 43.42 +1 1365637..1365993 - 118 208435200 rplR HPG27_1252 - ribosomal protein L18 1225 44.88 +1 1366007..1366543 - 178 208435201 rplF HPG27_1253 - ribosomal protein L6 1226 37.63 0 1366554..1366949 - 131 208435202 rpsH HPG27_1254 - ribosomal protein S8 1227 43.55 +1 1366959..1367144 - 61 208435203 - HPG27_1255 - ribosomal protein S14 1228 39.93 0 1367154..1367699 - 181 208435204 rplE HPG27_1256 - ribosomal protein L5 1229 43.08 +1 1367712..1367906 - 64 208435205 rplX HPG27_1257 - ribosomal protein L24 1230 44.17 +1 1367934..1368302 - 122 208435206 rplN HPG27_1258 - ribosomal protein L14 1231 37.93 0 1368305..1368565 - 86 208435207 rpsQ HPG27_1259 - ribosomal protein S17 1232 38.17 0 1368579..1368764 - 61 208435208 rpmC HPG27_1260 - ribosomal protein L29 1233 42.25 0 1368766..1369191 - 141 208435209 rplP HPG27_1261 - ribosomal protein L16 1234 44.54 +1 1369194..1369898 - 234 208435210 rpsC HPG27_1262 - ribosomal protein S3 1235 44.44 +1 1369902..1370270 - 122 208435211 rplV HPG27_1263 - ribosomal protein L22 1236 39.01 0 1370280..1370561 - 93 208435212 rpsS HPG27_1264 - ribosomal protein S19 1237 47.05 +2 1370572..1371402 - 276 208435213 rplB HPG27_1265 - ribosomal protein L2 1238 39.01 0 1371418..1371699 - 93 208435214 rplW HPG27_1266 - ribosomal protein L23 1239 43.06 +1 1371703..1372350 - 215 208435215 rplD HPG27_1267 - ribosomal protein L4 1240 45.83 +1 1372385..1372960 - 191 208435216 rplC HPG27_1268 - ribosomal protein L3 1241 45.08 +1 1372997..1373311 - 104 208435217 rpsJ HPG27_1269 - ribosomal protein S10 1242 38.20 0 1373521..1374609 + 362 208435218 - HPG27_1270 - conserved hypothetical ATP-binding protein 1243 40.76 0 1374851..1375429 + 192 208435219 - HPG27_1271 - hypothetical protein 1244 42.93 +1 1375403..1376017 - 204 208435220 - HPG27_1272 - ribonuclease HII 1245 44.32 +1 1376190..1377581 - 463 208435221 - HPG27_1273 - fumerase 1246 42.86 0 1377756..1378133 + 125 208435222 - HPG27_1274 - hypothetical protein 1247 34.35 -1 1378198..1379376 + 392 208435223 - HPG27_1275 - hypothetical protein 1248 38.00 0 1379373..1380380 + 335 208435224 - HPG27_1276 - cation efflux system protein 1249 41.65 0 1380381..1383494 + 1037 208435225 - HPG27_1277 - cation efflux system protein 1250 38.01 0 1383497..1383838 - 113 208435226 - HPG27_1278 - branched-chain amino acid transport protein 1251 41.19 0 1383838..1384524 - 228 208435227 - HPG27_1279 - branched-chain amino acid transport protein 1252 41.80 0 1384535..1385644 - 369 208435228 dnaJ HPG27_1280 - co-chaperone and heat shock protein 1253 37.05 0 1385768..1386898 + 376 208435229 - HPG27_1281 - hypothetical protein 1254 34.09 -1 1387124..1387786 + 220 208435230 - HPG27_1282 - hypothetical protein 1255 39.55 0 1387850..1388878 - 342 208435231 - HPG27_1283 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1256 38.98 0 1389016..1389777 + 253 208435232 - HPG27_1284 - hypothetical protein 1257 40.51 0 1389774..1390163 - 129 208435233 - HPG27_1285 - nicotinate-nucleotide adenyltransferase 1258 40.72 0 1390282..1390728 - 148 208435234 - HPG27_1286 - nickel uptake regulation protein 1259 39.73 0 1391051..1391488 + 145 208435235 - HPG27_1287 - biopolymer transport protein 1260 38.21 0 1391485..1391874 + 129 208435236 - HPG27_1288 - biopolymer transport protein 1261 41.80 0 1391966..1392697 + 243 208435237 - HPG27_1289 - siderophore-mediated iron transport protein 1262 39.63 0 1392974..1393354 + 126 208435238 - HPG27_1290 - outer membrane protein 1263 38.41 0 1393498..1394226 - 242 208435239 - HPG27_1291 - hypothetical protein 1264 37.20 0 1394232..1395188 - 318 208435240 - HPG27_1292 - magnesium and cobalt transport protein 1265 41.60 0 1395204..1396412 - 402 208435241 - HPG27_1293 - phosphoglycerate kinase 1266 42.80 0 1396428..1397420 - 330 208435242 gapB HPG27_1294 - glyceraldehyde-3-phosphate dehydrogenase 1267 42.59 0 1397509..1398210 - 233 208435243 - HPG27_1295 - uracil-DNA glycosylase 1268 41.18 0 1398207..1398869 - 220 208435244 - HPG27_1296 - 1-acyl-glycerol-3-phosphate acyl transferase 1269 37.63 0 1398907..1400022 - 371 208435245 - HPG27_1297 - hypothetical protein 1270 42.42 0 1400086..1401450 - 454 208435246 - HPG27_1298 - carboxyl-terminal protease 1271 33.06 -1 1401672..1402394 - 240 208435247 - HPG27_1299 - type II restriction endonuclease 1272 29.41 -2 1402391..1402543 - 50 208435248 - HPG27_1300 - hypothetical protein 1273 33.15 -1 1402544..1403623 - 359 208435249 - HPG27_1301 - adenine specific DNA methyltransferase 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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