version 1.0
Helicobacter pylori G27, complete genome - 1..1652982 1493 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1087 39.45 0 1221673..1222326 + 217 208435063 - HPG27_1113 - glutamine ABC transporter, permease protein 1088 39.43 0 1222328..1222999 + 223 208435064 - HPG27_1114 - glutamine ABC transporter, permease protein 1089 38.82 0 1223001..1223747 + 248 208435065 - HPG27_1115 - glutamine ABC transporter, ATP-binding protein 1090 37.77 0 1223796..1224629 + 277 208435066 - HPG27_1116 - glutamine ABC transporter, periplasmic glutamine-binding protein 1091 40.04 0 1224750..1225301 + 183 208435067 - HPG27_1117 - hypothetical protein 1092 43.22 +1 1225563..1226786 - 407 208435068 - HPG27_1118 - glucose/galactose transporter 1093 44.04 +1 1226915..1228222 - 435 208435069 - HPG27_1119 - hypothetical protein 1094 40.24 0 1228696..1230621 - 641 208435070 hopQ HPG27_1120 - outer membrane protein 1095 42.17 0 1231083..1231784 - 233 208435071 - HPG27_1121 - purine-nucleoside phosphorylase 1096 38.89 0 1231781..1233022 - 413 208435072 - HPG27_1122 - phosphopentomutase 1097 44.63 +1 1233034..1234290 - 418 208435073 - HPG27_1123 - pyrimidine nucleoside transport protein 1098 40.39 0 1234724..1235941 + 405 208435074 - HPG27_1124 - multidrug-efflux transporter 1099 43.57 +1 1235960..1236721 + 253 208435075 - HPG27_1125 - hypothetical protein 1100 38.11 0 1236730..1237881 - 383 208435076 - HPG27_1126 - Na+/H+ antiporter 1101 38.99 0 1237907..1239286 - 459 208435077 - HPG27_1127 - hypothetical protein 1102 43.62 +1 1239455..1240630 - 391 208435078 - HPG27_1128 - sugar efflux transporter protein 1103 41.80 0 1240904..1241647 + 247 208435079 - HPG27_1129 - alpha-carbonic anhydrase 1104 35.21 -1 1241877..1242836 - 319 208435080 - HPG27_1130 - hypothetical protein 1105 33.82 -1 1243113..1244351 - 412 208435081 - HPG27_1131 - hypothetical protein 1106 34.23 -1 1244628..1245737 - 369 208435082 - HPG27_1132 - hypothetical protein 1107 33.76 -1 1246014..1247198 - 394 208435083 - HPG27_1133 - hypothetical protein 1108 42.75 0 1247631..1248437 - 268 208435084 - HPG27_1134 - aspartate-semialdehyde dehydrogenase 1109 39.28 0 1248658..1249986 - 442 208435085 - HPG27_1135 - histidyl-tRNA synthetase 1110 40.67 0 1250048..1251097 + 349 208435086 - HPG27_1136 - ADP-heptose-lpsheptosyltransferase II 1111 36.78 0 1251286..1251720 - 144 208435087 - HPG27_1137 - hypothetical protein 1112 41.11 0 1251938..1252927 + 329 208435088 - HPG27_1138 - aldo-ketoreductase, putative 1113 44.93 +1 1253443..1255521 - 692 208435089 - HPG27_1139 - translation elongation factor EF-G 1114 43.22 +1 1255533..1255967 - 144 208435090 - HPG27_1140 - ribosomal protein S7 1115 42.65 0 1256016..1256423 - 135 208435091 - HPG27_1141 - ribosomal protein S12 1116 43.73 +1 1256512..1264929 - 2805 208435092 - HPG27_1142 - DNA-directed RNA polymerase, beta subunit 1117 35.78 0 1264980..1265183 - 67 208435093 - HPG27_1143 - DNA-directed RNA polymerase, beta subunit 1118 35.27 -1 1265195..1265401 + 68 208435094 - HPG27_1144 - hypothetical protein 1119 42.59 0 1265405..1265782 - 125 208435095 rplL HPG27_1145 - ribosomal protein L7/L12 1120 40.40 0 1265824..1266318 - 164 208435096 rplJ HPG27_1146 - ribosomal protein L10 1121 43.83 +1 1266427..1267131 - 234 208435097 rplA HPG27_1147 - ribosomal protein L1 1122 42.72 0 1267176..1267601 - 141 208435098 rplK HPG27_1148 - ribosomal protein L11 1123 40.11 0 1267619..1268149 - 176 208435099 nusG HPG27_1149 - transcription termination factor 1124 38.33 0 1268176..1268355 - 59 208435100 - HPG27_1150 - preprotein translocase subunit 1125 35.85 0 1268612..1268770 - 52 208435101 rpmG HPG27_1151 - ribosomal protein L33 1126 43.75 +1 1268804..1270003 - 399 208435102 - HPG27_1152 - translation elongation factor EF-Tu 1127 38.34 0 1270700..1272436 + 578 208435103 - HPG27_1153 - ABC-transporter, ATP-binding domain 1128 37.07 0 1272445..1273113 - 222 208435104 - HPG27_1154 - hypothetical protein 1129 37.47 0 1273216..1274205 - 329 208435105 - HPG27_1155 - type II adenine specific DNA methyltransferase 1130 35.44 0 1274533..1274817 - 94 208435106 - HPG27_1156 - hypothetical protein 1131 51.53 +2 1275032..1275520 - 162 208435107 - HPG27_1157 - serine acetyl transferase 1132 45.60 +1 1276166..1276483 - 105 208435108 - HPG27_1158 - ATP synthase F0, subunit c 1133 40.78 0 1276616..1278682 - 688 208435109 - HPG27_1159 - polynucleotide phosphorylase 1134 38.01 0 1278685..1279389 - 234 208435110 - HPG27_1160 - hypothetical protein 1135 37.53 0 1279404..1281665 - 753 208435111 - HPG27_1161 - organic solvent tolerance protein 1136 37.08 0 1281668..1282147 - 159 208435112 - HPG27_1162 - hypothetical protein 1137 39.06 0 1282196..1283470 - 424 208435113 - HPG27_1163 - glycinamide ribonucleotide synthetase 1138 38.59 0 1283783..1284448 - 221 208435114 - HPG27_1164 - ABC transporter, ATP-binding protein 1139 37.59 0 1284463..1285167 - 234 208435115 - HPG27_1165 - putative undecaprenylpyrophosphate synthase 1140 39.56 0 1285207..1288047 - 946 208435116 - HPG27_1166 - D-lactate dehydrogenase 1141 39.94 0 1288119..1288451 + 110 208435117 - HPG27_1167 - hypothetical protein 1142 38.33 0 1288454..1289134 + 226 208435118 - HPG27_1168 - uroporphyrinogen III cosynthase 1143 39.44 0 1289181..1289573 + 130 208435119 - HPG27_1169 - crcB integral membrane protein 1144 38.63 0 1289620..1290657 - 345 208435120 - HPG27_1170 - oxygen-independent coproporphyrinogen III oxidase 1145 40.21 0 1290754..1291044 + 96 208435121 - HPG27_1171 - cytochrome c 553 1146 41.24 0 1291205..1291672 + 155 208435122 - HPG27_1172 - diadenosine polyphosphate hydrolase 1147 44.83 +1 1291674..1292891 + 405 208435123 - HPG27_1173 - aspartokinase 1148 39.23 0 1292888..1293430 + 180 208435124 - HPG27_1174 - hypothetical protein 1149 37.29 0 1293427..1294083 + 218 208435125 - HPG27_1175 - DNApolymerase III delta prime subunit 1150 39.98 0 1294080..1295222 + 380 208435126 - HPG27_1176 - dihydropteroate synthase 1151 43.07 +1 1295244..1295705 - 153 208435127 - HPG27_1177 - hypothetical protein 1152 41.25 0 1296100..1296996 + 298 208435128 - HPG27_1178 - hypothetical protein 1153 38.30 0 1297000..1298247 + 415 208435129 - HPG27_1179 - hypothetical protein 1154 36.05 0 1298327..1298878 + 183 208435130 - HPG27_1180 - hypothetical protein 1155 43.26 +1 1298878..1300005 + 375 208435131 - HPG27_1181 - carbamoyl-phosphate synthetase 1156 45.77 +1 1300170..1301174 + 334 208435132 - HPG27_1182 - formamidase 1157 38.37 0 1301253..1301510 - 85 208435133 - HPG27_1183 - hypothetical protein 1158 41.19 0 1301625..1302197 - 190 208435134 - HPG27_1184 - maf protein 1159 42.67 0 1302199..1304652 - 817 208435135 - HPG27_1185 - alanyl-tRNA synthetase 1160 35.93 0 1304861..1305091 + 76 208435136 - HPG27_1186 - hypothetical protein 1161 44.09 +1 1305877..1307847 - 656 208435137 - HPG27_1187 - outer membrane protein 1162 30.39 -2 1307962..1308165 + 67 208435138 - HPG27_1188 - hypothetical protein 1163 41.47 0 1308521..1308778 - 85 208435139 rpsR HPG27_1189 - ribosomal protein S18 1164 42.67 0 1308801..1309346 - 181 208435140 - HPG27_1190 - single-strand DNA-binding protein 1165 38.46 0 1309356..1309784 - 142 208435141 rpsF HPG27_1191 - ribosomal protein S6 1166 36.90 0 1309937..1310944 - 335 208435142 - HPG27_1192 - DNA polymerase III holoenzyme delta subunit 1167 37.93 0 1310949..1312883 - 644 208435143 - HPG27_1193 - 3'-5'exoribonuclease R 1168 42.05 0 1312883..1313674 - 263 208435144 - HPG27_1194 - shikimate 5-dehydrogenase 1169 40.10 0 1313682..1314272 - 196 208435145 - HPG27_1195 - hypothetical protein 1170 41.45 0 1314281..1315327 - 348 208435146 - HPG27_1196 - oligopeptide ABC transporter, permease protein 1171 40.16 0 1317107..1318087 - 326 208435147 - HPG27_1198 - tryptophanyl-tRNA synthetase 1172 36.24 0 1318158..1318880 - 240 208435148 - HPG27_1199 - biotin synthesis protein 1173 42.09 0 1319004..1319597 + 197 208435149 - HPG27_1200 - protein translocation protein 1174 40.68 0 1319597..1320154 + 185 208435150 - HPG27_1201 - ribosome releasing factor 1175 43.56 +1 1320158..1320763 + 201 208435151 - HPG27_1202 - orotate phosphoribosyl transferase 1176 39.44 0 1320825..1321217 + 130 208435152 - HPG27_1203 - hypothetical protein 1177 43.48 +1 1321214..1321903 + 229 208435153 - HPG27_1204 - NAD-dependent deacetylase 1178 38.06 0 1322011..1322412 + 133 208435154 - HPG27_1205 - NADH-ubiquinone oxidoreductase chain A 1179 46.67 +2 1322412..1322891 + 159 208435155 nuoB HPG27_1206 - NADH-ubiquinone oxidoreductase chain B 1180 41.23 0 1322891..1323688 + 265 208435156 nuoC HPG27_1207 - NADH-ubiquinone oxidoreductase chain C 1181 43.66 +1 1323690..1324919 + 409 208435157 nuoD HPG27_1208 - NADH-ubiquinone oxidoreductase chain D 1182 38.53 0 1324916..1325146 + 76 208435158 - HPG27_1209 - NADH-ubiquinone oxidoreductase chain E 1183 37.18 0 1325149..1326135 + 328 208435159 - HPG27_1210 - NADH-ubiquinone oxidoreductase chain F 1184 41.56 0 1326132..1328696 + 854 208435160 - HPG27_1211 - NADH-ubiquinone oxidoreductase chain G 1185 43.23 +1 1328693..1329682 + 329 208435161 - HPG27_1212 - NADH-ubiquinone oxidoreductase chain H 1186 44.95 +1 1329693..1330355 + 220 208435162 - HPG27_1213 - NADH-ubiquinone oxidoreductase chain I 39.14 MEAN 3.74 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0