version 1.0
Helicobacter pylori Shi470, complete genome - 1..1608548 1569 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 287 36.55 0 294053..295732 + 559 188527099 - HPSH_01520 - para-aminobenzoate synthetase (pabB) 288 44.80 +1 295918..296937 + 339 188527100 amiE HPSH_01525 - acylamide amidohydrolase 289 39.77 0 297020..299506 - 828 188527101 flgL HPSH_01530 - flagellar hook-associated protein FlgL 290 40.63 0 299726..300040 + 104 188527102 rplU HPSH_01535 - 50S ribosomal protein L21 291 46.07 +1 300055..300321 + 88 188527103 rpmA HPSH_01540 - 50S ribosomal protein L27 292 41.15 0 300438..302087 + 549 188527104 - HPSH_01545 - periplasmic dipeptide-binding protein 293 44.38 +1 302098..303102 + 334 188527105 - HPSH_01550 - dipeptide permease protein 294 45.22 +1 303102..303959 + 285 188527106 - HPSH_01555 - dipeptide permease protein 295 42.82 0 303971..304834 + 287 188527107 - HPSH_01560 - dipeptide ABC transporter, ATP-binding protein (dppD) 296 42.13 0 304831..305637 + 268 188527108 - HPSH_01565 - dipeptide transport system atp-binding protein 297 43.86 +1 305657..306739 + 360 188527109 obgE HPSH_01570 - GTPase ObgE 298 42.47 0 306781..307776 + 331 188527110 - HPSH_01575 - hypothetical protein 299 38.20 0 308024..308578 + 184 188527111 - HPSH_01580 - hypothetical protein 300 43.46 +1 308588..309880 + 430 188527112 - HPSH_01585 - glutamate-1-semialdehyde aminotransferase 301 39.15 0 309885..310142 + 85 188527113 - HPSH_01590 - hypothetical protein 302 37.04 0 310158..310562 + 134 188527114 - HPSH_01595 - hypothetical protein 303 42.26 0 310646..311530 + 294 188527115 - HPSH_01600 - hypothetical protein 304 32.76 -1 312479..313171 - 230 188527116 - HPSH_01615 - type II restriction enzyme 305 35.05 0 313182..314291 - 369 188527117 - HPSH_01620 - DNA methylase 306 43.14 +1 314387..314743 + 118 188527118 - HPSH_01625 - hypothetical protein 307 41.02 0 314743..315705 + 320 188527119 - HPSH_01630 - conserved hypothetical ATP-binding protein 308 39.70 0 315711..316856 - 381 188527120 - HPSH_01635 - nitrite extrusion protein (narK) 309 27.16 -2 317180..317260 + 26 188527121 - HPSH_01640 - hypothetical protein 310 40.61 0 317346..318101 - 251 188527122 - HPSH_01645 - hypothetical protein 311 38.25 0 318162..319787 - 541 188527123 argS HPSH_01650 - arginyl-tRNA synthetase 312 38.75 0 319790..320029 - 79 188527124 - HPSH_01655 - sec-independent protein translocase protein 313 38.33 0 320099..320719 - 206 188527125 gmk HPSH_01660 - guanylate kinase 314 39.16 0 320712..322187 - 491 188527126 - HPSH_01665 - poly E-rich protein 315 23.81 -2 322200..322325 - 41 188527127 - HPSH_01670 - hypothetical protein 316 38.12 0 322329..322871 + 180 188527128 - HPSH_01675 - membrane bound endonuclease (nuc) 317 39.57 0 322878..323615 - 245 188527129 - HPSH_01680 - outer membrane protein HorC 318 41.46 0 323745..324458 + 237 188527130 flgH HPSH_01685 - flagellar basal body L-ring protein 319 37.87 0 324476..325159 + 227 188527131 - HPSH_01690 - CMP-N-acetylneuraminic acid synthetase 320 35.85 0 325150..326022 + 290 188527132 - HPSH_01695 - CMP-N-acetylneuraminic acid synthetase (neuA) 321 32.41 -1 326019..326561 + 180 188527133 - HPSH_01700 - flagellar biosynthesis protein G 322 38.13 0 326494..327432 - 312 188527134 lpxK HPSH_01705 - tetraacyldisaccharide 4'-kinase 323 38.83 0 327429..328211 - 260 188527135 - HPSH_01710 - NH(3)-dependent NAD+ synthetase (nadE) 324 41.59 0 328458..329450 + 330 188527136 - HPSH_01715 - ketol-acid reductoisomerase 325 42.13 0 329469..330275 + 268 188527137 - HPSH_01720 - cell division inhibitor (minD) 326 36.32 0 330272..330505 + 77 188527138 minE HPSH_01725 - cell division topological specificity factor MinE 327 41.82 0 330517..331317 + 266 188527139 - HPSH_01730 - hypothetical protein 328 44.20 +1 331314..331718 + 134 188527140 - HPSH_01735 - Holliday junction resolvase-like protein 329 40.00 0 331775..331849 + 24 188527141 - HPSH_01740 - hypothetical protein 330 36.73 0 331849..332319 + 156 188527142 - HPSH_01745 - cysteine-rich protein H 331 37.76 0 332509..332847 + 112 188527143 - HPSH_01750 - hypothetical protein 332 42.68 0 332831..333397 + 188 188527144 - HPSH_01755 - hypothetical protein 333 44.18 +1 333409..333657 + 82 188527145 - HPSH_01760 - hypothetical protein 334 39.68 0 333663..334040 + 125 188527146 - HPSH_01765 - hypothetical protein 335 40.83 0 334131..334250 + 39 188527147 - HPSH_01770 - hypothetical protein 336 30.67 -1 334247..334321 + 24 188527148 - HPSH_01775 - hypothetical protein 337 38.96 0 334312..334773 + 153 188527149 - HPSH_01780 - hypothetical protein 338 40.46 0 334789..335574 + 261 188527150 - HPSH_01785 - hypothetical protein 339 36.47 0 335564..336646 + 360 188527151 - HPSH_01790 - hypothetical protein 340 41.72 0 336702..337583 - 293 188527152 - HPSH_01795 - hypothetical protein 341 40.43 0 337583..339133 - 516 188527153 - HPSH_01800 - single-stranded-DNA specific exonuclease 342 42.18 0 339142..340758 - 538 188527154 - HPSH_01805 - CTP synthetase 343 38.16 0 341014..341676 + 220 188527155 - HPSH_01810 - hypothetical protein 344 39.44 0 341720..343423 + 567 188527156 fliF HPSH_01815 - flagellar MS-ring protein 345 41.57 0 343442..344473 + 343 188527157 fliG HPSH_01820 - flagellar motor switch protein G 346 37.22 0 344466..345236 + 256 188527158 fliH HPSH_01825 - flagellar assembly protein H 347 43.06 +1 345239..347089 + 616 188527159 - HPSH_01830 - 1-deoxy-D-xylulose-5-phosphate synthase 348 42.18 0 347086..348894 + 602 188527160 - HPSH_01835 - GTP-binding protein LepA 349 33.55 -1 348903..349832 + 309 188527161 - HPSH_01840 - DNA-cytosine methyltransferase 350 40.34 0 349825..350295 + 156 188527162 - HPSH_01845 - hypothetical protein 351 42.84 0 350770..351579 - 269 188527163 - HPSH_01850 - flagellar basal-body rod protein (flgG) 352 40.48 0 351634..352920 - 428 188527164 - HPSH_01855 - alpha-ketoglutarate permease 353 39.77 0 353083..355722 - 879 188527165 - HPSH_01860 - cell division protein 354 35.56 0 355719..358055 - 778 188527166 - HPSH_01865 - hypothetical protein 355 44.76 +1 358052..359977 - 641 188527167 - HPSH_01870 - transketolase 356 36.65 0 360024..360866 - 280 188527168 - HPSH_01875 - bifunctional riboflavin kinase/FMN adenylyltransferase 357 36.30 0 360832..361539 - 235 188527169 - HPSH_01880 - hemolysin 358 38.63 0 361539..362048 - 169 188527170 - HPSH_01885 - hypothetical protein 359 41.34 0 362121..363044 + 307 188527171 pyrB HPSH_01890 - aspartate carbamoyltransferase catalytic subunit 360 25.93 -2 363054..363134 - 26 188527172 - HPSH_01895 - hypothetical protein 361 42.64 0 363339..364778 + 479 188527173 - HPSH_01900 - hypothetical protein 362 38.89 0 364870..366525 + 551 188527174 - HPSH_01905 - multidrug resistance protein (msbA) 363 37.34 0 366519..367142 + 207 188527175 - HPSH_01910 - hypothetical protein 364 39.12 0 367146..367715 + 189 188527176 - HPSH_01915 - hypothetical protein 365 32.33 -1 367826..369016 + 396 188527177 - HPSH_01920 - hypothetical protein 366 28.36 -2 369009..369671 + 220 188527178 - HPSH_01925 - hypothetical protein 367 42.02 0 369752..370741 + 329 188527179 - HPSH_01930 - high affinity nickel transport protein 368 34.88 0 370745..371260 - 171 188527180 - HPSH_01935 - hypothetical protein 369 40.24 0 371393..372709 + 438 188527181 - HPSH_01940 - hypothetical protein 370 30.43 -2 373057..373194 + 45 188527182 - HPSH_01945 - hypothetical protein 371 37.88 0 373184..373249 + 21 188527183 - HPSH_01950 - hypothetical protein 372 31.01 -1 373334..373462 + 42 188527184 - HPSH_01955 - hypothetical protein 373 42.65 0 373835..374038 - 67 188527185 - HPSH_01960 - copper ion binding protein (copP) 374 39.98 0 374039..376264 - 741 188527186 - HPSH_01965 - copper-transporting ATPase 375 40.34 0 376261..376974 - 237 188527187 - HPSH_01970 - phosphatidylserine synthase 376 43.23 +1 377220..379118 - 632 188527188 - HPSH_01975 - cell division protein (ftsH) 377 37.68 0 379127..380116 - 329 188527189 prmA HPSH_01980 - ribosomal protein L11 methyltransferase 378 42.40 0 380117..380491 - 124 188527190 - HPSH_01985 - response regulator 379 36.15 0 380783..381385 + 200 188527191 - HPSH_01990 - outer membrane protein HorD 380 33.58 -1 381517..381924 - 135 188527192 - HPSH_01995 - hypothetical protein 381 38.53 0 381927..382157 - 76 188527193 - HPSH_02000 - hypothetical protein 382 35.94 0 382151..382687 - 178 188527194 gidB HPSH_02005 - glucose-inhibited division protein B 383 38.25 0 382684..383721 - 345 188527195 queA HPSH_02010 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 384 39.63 0 383722..384483 - 253 188527196 - HPSH_02015 - hypothetical protein 385 37.06 0 384476..384958 - 160 188527197 - HPSH_02020 - sec-independent translocase 386 42.04 0 385026..386036 - 336 188527198 ruvB HPSH_02025 - Holliday junction DNA helicase B 38.76 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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