version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 942 39.00 0 981970..983151 - 393 108563366 - HPAG1_0941 - 3-deoxy-D-manno-octulosonic-acid transferase 943 37.39 0 983152..983916 - 254 108563367 - HPAG1_0942 - hypothetical protein 944 38.66 0 983926..984657 - 243 108563368 - HPAG1_0943 - hypothetical protein 945 42.03 0 984659..985555 - 298 108563369 glyQ HPAG1_0944 - glycyl-tRNA synthetase subunit alpha 946 45.05 +1 985569..986507 - 312 108563370 gpsA HPAG1_0945 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 947 37.82 0 986648..988231 - 527 108563371 - HPAG1_0946 - hypothetical protein 948 39.20 0 988228..990564 - 778 108563372 - HPAG1_0947 - hypothetical protein 949 37.52 0 990561..992087 - 508 108563373 - HPAG1_0948 - hypothetical protein 950 34.04 -1 992653..992934 - 93 108563374 - HPAG1_0949 - hypothetical protein 951 41.90 0 992950..996009 - 1019 108563375 - HPAG1_0950 - cobalt-zinc-cadmium resistance protein 952 40.09 0 996009..997088 - 359 108563376 - HPAG1_0951 - cobalt-zinc-cadmium resistance protein 953 39.12 0 997085..998380 - 431 108563377 - HPAG1_0952 - hypothetical protein 954 38.03 0 998370..1000475 - 701 108563378 glyS HPAG1_0953 - glycyl-tRNA synthetase subunit beta 955 39.69 0 1000587..1001672 + 361 108563379 - HPAG1_0954 - hypothetical protein 956 42.07 0 1001685..1003160 + 491 108563380 - HPAG1_0955 - phosphoglyceromutase 957 39.01 0 1003175..1003456 + 93 108563381 gatC HPAG1_0956 - aspartyl/glutamyl-tRNA amidotransferase subunit C 958 39.21 0 1003576..1004886 - 436 108563382 - HPAG1_0957 - adenosylmethionine--8-amino-7-oxononanoate transaminase 959 36.95 0 1005016..1006479 + 487 108563383 - HPAG1_0958 - peptidyl-prolyl cis-trans isomerase D 960 42.33 0 1006495..1007973 + 492 108563384 - HPAG1_0959 - cell division protein 961 43.87 +1 1008104..1009261 + 385 108563385 - HPAG1_0960 - cell division protein FtsZ 962 40.95 0 1009714..1009818 - 34 108563386 - HPAG1_0961 - hypothetical protein 963 37.57 0 1009929..1010117 - 62 108563387 - HPAG1_0962 - hypothetical protein 964 38.06 0 1010280..1011104 - 274 108563388 - HPAG1_0963 - hypothetical protein 965 41.15 0 1011239..1011430 - 63 108563389 - HPAG1_0964 - hypothetical protein 966 38.98 0 1012207..1012578 - 123 108563390 - HPAG1_0965 - hypothetical protein 967 38.94 0 1012641..1012961 - 106 108563391 - HPAG1_0966 - hypothetical protein 968 29.59 -2 1017340..1017606 + 88 108563392 - HPAG1_0967 - hypothetical protein 969 42.86 +1 1017993..1018433 + 146 108563393 - HPAG1_0968 - hypothetical protein 970 37.16 0 1018474..1020303 + 609 108563394 - HPAG1_0969 - hypothetical protein 971 35.37 -1 1020454..1020699 + 81 108563395 - HPAG1_0970 - hypothetical protein 972 39.97 0 1020701..1021363 + 220 108563396 - HPAG1_0971 - hypothetical protein 973 40.21 0 1021469..1023316 - 615 108563397 - HPAG1_0972 - arginine decarboxylase 974 38.03 0 1023331..1024500 - 389 108563398 - HPAG1_0973 - type 1 capsular polysaccharide biosynthesis protein J 975 38.46 0 1024505..1024933 - 142 108563399 - HPAG1_0974 - hypothetical protein 976 37.53 0 1024950..1025735 - 261 108563400 - HPAG1_0975 - hypothetical protein 977 36.18 0 1025739..1026758 - 339 108563401 - HPAG1_0976 - hypothetical protein 978 38.35 0 1026759..1028690 - 643 108563402 - HPAG1_0977 - methionyl-tRNA synthetase 979 41.45 0 1028860..1030029 + 389 108563403 - HPAG1_0978 - cyclopropane fatty acid synthase 980 37.66 0 1030032..1031903 - 623 108563404 - HPAG1_0979 - hypothetical protein 981 31.31 -2 1032378..1032476 - 32 108563405 - HPAG1_0980 - hypothetical protein 982 51.47 +2 1032502..1032705 + 67 108563406 - HPAG1_0981 - hypothetical protein 983 37.33 0 1033136..1033885 - 249 108563407 - HPAG1_0982 - putative neuraminyllactose-binding hemagglutinin-like protein 984 41.58 0 1033970..1035496 - 508 108563408 guaA HPAG1_0983 - bifunctional GMP synthase/glutamine amidotransferase protein 985 36.20 0 1035507..1035995 - 162 108563409 - HPAG1_0984 - hypothetical protein 986 41.49 0 1036156..1038546 - 796 108563410 - HPAG1_0985 - biotin sulfoxide reductase 987 37.73 0 1038650..1039240 - 196 108563411 - HPAG1_0986 - hypothetical protein 988 41.50 0 1039266..1040588 - 440 108563412 - HPAG1_0987 - nifS-like protein 989 35.56 -1 1040607..1040921 - 104 108563413 - HPAG1_0988 - ADP hydrolase 990 41.03 0 1041003..1041989 + 328 108563414 pheS HPAG1_0989 - phenylalanyl-tRNA synthetase subunit alpha 991 39.39 0 1041989..1044283 + 764 108563415 pheT HPAG1_0990 - phenylalanyl-tRNA synthetase subunit beta 992 39.53 0 1044287..1045576 + 429 108563416 - HPAG1_0991 - 3-phosphoshikimate 1-carboxyvinyltransferase 993 39.52 0 1045566..1046390 + 274 108563417 ispH HPAG1_0992 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 994 40.45 0 1046511..1048181 + 556 108563418 rpsA HPAG1_0993 - 30S ribosomal protein S1 995 35.34 -1 1048210..1048758 + 182 108563419 - HPAG1_0994 - hypothetical protein 996 40.63 0 1048774..1050348 + 524 108563420 - HPAG1_0995 - D-3-phosphoglycerate dehydrogenase 997 40.41 0 1050358..1052208 + 616 108563421 - HPAG1_0996 - hypothetical protein 998 38.12 0 1052232..1052900 + 222 108563422 - HPAG1_0997 - hypothetical protein 999 36.36 0 1052902..1053660 + 252 108563423 - HPAG1_0998 - hypothetical protein 1000 38.78 0 1053664..1054599 + 311 108563424 - HPAG1_0999 - CheA-MCP interaction modulator 1001 43.21 +1 1054656..1057064 + 802 108563425 - HPAG1_1000 - autophosphorylating histidine kinase 1002 38.15 0 1057061..1057558 + 165 108563426 - HPAG1_1001 - CheA-MCP coupling protein 1003 41.72 0 1057818..1058318 - 166 108563427 - HPAG1_1002 - adhesin-thiol peroxidase 1004 38.94 0 1058541..1059182 + 213 108563428 - HPAG1_1003 - iron-dependent superoxide dismutase 1005 38.61 0 1059235..1059954 + 239 108563429 - HPAG1_1004 - hypothetical protein 1006 38.49 0 1059987..1061846 - 619 108563430 - HPAG1_1005 - primosome assembly protein PriA 1007 34.18 -1 1061831..1062067 - 78 108563431 - HPAG1_1006 - hypothetical protein 1008 32.89 -1 1062080..1062307 - 75 108563432 - HPAG1_1007 - hypothetical protein 1009 35.88 0 1062489..1063235 + 248 108563433 - HPAG1_1008 - hypothetical protein 1010 37.48 0 1063243..1063773 - 176 108563434 - HPAG1_1009 - hypothetical protein 1011 39.54 0 1063947..1065170 + 407 108563435 - HPAG1_1010 - zinc-metalloprotease 1012 39.03 0 1065167..1065991 + 274 108563436 - HPAG1_1011 - S-adenosylmethionine-dependent methyltransferase 1013 44.25 +1 1066063..1067409 + 448 108563437 - HPAG1_1012 - glutamate dehydrogenase 1014 37.11 0 1067423..1068799 - 458 108563438 - HPAG1_1013 - alpha 1,3-fucosyltransferase 1015 40.55 0 1068809..1071619 - 936 108563439 - HPAG1_1014 - cytochrome c-type biogenesis protein 1016 36.24 0 1071606..1072292 - 228 108563440 - HPAG1_1015 - thiol:disulfide interchange protein 1017 37.30 0 1072366..1073373 - 335 108563441 hemH HPAG1_1016 - ferrochelatase 1018 35.42 -1 1073429..1073860 + 143 108563442 - HPAG1_1017 - hypothetical protein 1019 39.35 0 1073861..1074541 + 226 108563443 - HPAG1_1018 - hypothetical protein 1020 38.99 0 1074565..1076667 - 700 108563444 - HPAG1_1019 - outer membrane protein 1021 41.71 0 1076827..1077399 - 190 108563445 dcd HPAG1_1020 - deoxycytidine triphosphate deaminase 1022 42.24 0 1077517..1077999 + 160 108563446 - HPAG1_1021 - biotin carboxyl carrier protein 1023 43.72 +1 1078005..1079381 + 458 108563447 - HPAG1_1022 - biotin carboxylase 1024 34.06 -1 1079474..1080295 + 273 108563448 - HPAG1_1023 - putative type II DNA modification enzyme 1025 30.41 -2 1080265..1080435 + 56 108563449 - HPAG1_1024 - putative type II DNA modification enzyme 1026 32.69 -1 1080435..1080743 + 102 108563450 - HPAG1_1025 - hypothetical protein 1027 28.27 -2 1080748..1080984 + 78 108563451 - HPAG1_1026 - hypothetical protein 1028 38.05 0 1081077..1081670 + 197 108563452 - HPAG1_1027 - hypothetical protein 1029 38.08 0 1081667..1082803 + 378 108563453 - HPAG1_1028 - spore coat polysaccharide biosynthesis protein C 1030 39.08 0 1083113..1084138 + 341 108563454 nrdF HPAG1_1029 - ribonucleotide-diphosphate reductase subunit beta 1031 42.54 0 1084148..1084777 + 209 108563455 pcm HPAG1_1030 - protein-L-isoaspartate O-methyltransferase 1032 36.90 0 1084788..1085825 + 345 108563456 - HPAG1_1031 - hypothetical protein 1033 41.56 0 1085826..1086554 + 242 108563457 truA HPAG1_1032 - tRNA pseudouridine synthase A 1034 39.42 0 1086548..1087582 - 344 108563458 - HPAG1_1033 - UDP-glucose 4-epimerase 1035 37.37 0 1088114..1089649 + 511 108563459 - HPAG1_1034 - putative outer membrane protein 1036 43.03 +1 1089671..1090423 + 250 108563460 - HPAG1_1035 - short chain alcohol dehydrogenase 1037 42.84 0 1090636..1091508 - 290 108563461 - HPAG1_1036 - cysteine-rich protein C 1038 41.79 0 1091578..1092204 - 208 108563462 - HPAG1_1037 - 2-keto-3-deoxy-6-phosphogluconate aldolase 1039 42.69 0 1092223..1094049 - 608 108563463 - HPAG1_1038 - phosphogluconate dehydratase 1040 37.17 0 1094115..1095392 + 425 108563464 - HPAG1_1039 - glucose-6-phosphate 1-dehydrogenase 1041 39.04 0 1095403..1096086 + 227 108563465 - HPAG1_1040 - glucose-6-phosphate 1-dehydrogenase 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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