version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 897 43.52 +1 933150..934739 + 529 108563321 - HPAG1_0896 - outer membrane protein HopB 898 40.78 0 935447..936991 - 514 108563322 - HPAG1_0897 - outer membrane protein HopG 899 41.97 0 937238..939679 - 813 108563323 - HPAG1_0898 - iron-regulated outer membrane protein 900 41.44 0 939938..940369 - 143 108563324 - HPAG1_0899 - hypothetical protein 901 42.17 0 940374..943631 - 1085 108563325 carB HPAG1_0900 - carbamoyl phosphate synthase large subunit 902 40.12 0 943729..944421 - 230 108563326 - HPAG1_0901 - hypothetical protein 903 40.26 0 944565..945560 + 331 108563327 - HPAG1_0902 - glyceraldehyde-3-phosphate dehydrogenase 904 38.57 0 945641..952894 + 2417 108563328 - HPAG1_0903 - vacuolating cytotoxin (VacA)-like protein 905 37.40 0 952945..954051 + 368 108563329 - HPAG1_0904 - outer membrane protein HopK 906 37.68 0 954119..954325 - 68 108563330 - HPAG1_0905 - 4-oxalocrotonate tautomerase 907 37.80 0 954472..955053 + 193 108563331 recR HPAG1_0906 - recombination protein RecR 908 35.34 -1 955050..956195 + 381 108563332 truD HPAG1_0907 - tRNA pseudouridine synthase D 909 39.65 0 956134..957114 + 326 108563333 - HPAG1_0908 - heat shock protein HtpX 910 37.94 0 957115..957657 + 180 108563334 folE HPAG1_0909 - GTP cyclohydrolase I 911 37.17 0 957673..958584 + 303 108563335 - HPAG1_0910 - geranyltranstransferase 912 41.29 0 958581..959384 + 267 108563336 surE HPAG1_0911 - stationary phase survival protein SurE 913 40.61 0 959381..960040 + 219 108563337 - HPAG1_0912 - hypothetical protein 914 40.26 0 960041..960646 + 201 108563338 - HPAG1_0913 - hypothetical protein 915 36.51 0 960643..961398 + 251 108563339 - HPAG1_0914 - hypothetical protein 916 41.77 0 961409..961894 + 161 108563340 - HPAG1_0915 - hypothetical protein 917 35.74 0 961898..962230 + 110 108563341 - HPAG1_0916 - putative outer membrane protein 918 39.15 0 962417..963586 - 389 108563342 - HPAG1_0917 - proline and betaine transporter 919 31.22 -2 964057..964860 - 267 108563343 - HPAG1_0918 - hypothetical protein 920 34.03 -1 964836..964979 - 47 108563344 - HPAG1_0919 - hypothetical protein 921 37.68 0 965033..965377 - 114 108563345 - HPAG1_0920 - hypothetical protein 922 36.67 0 965355..965744 - 129 108563346 - HPAG1_0921 - hypothetical protein 923 41.04 0 965813..966526 - 237 108563347 - HPAG1_0922 - amino acid ABC transporter, permease protein 924 40.99 0 966510..967280 - 256 108563348 - HPAG1_0923 - amino acid ABC transporter, periplasmic binding protein 925 41.27 0 967351..968484 - 377 108563349 - HPAG1_0924 - alanine racemase, biosynthetic 926 43.02 +1 968491..969843 - 450 108563350 - HPAG1_0925 - D-alanine glycine permease 927 40.47 0 969884..971116 - 410 108563351 - HPAG1_0926 - D-amino acid dehydrogenase 928 41.27 0 971138..971515 - 125 108563352 - HPAG1_0927 - hypothetical protein 929 38.50 0 971693..971905 - 70 108563353 - HPAG1_0928 - hypothetical protein 930 45.67 +1 971936..972235 + 99 108563354 - HPAG1_0929 - protein tRNA-associated locus protein 931 40.58 0 972795..974285 + 496 108563355 - HPAG1_0930 - hypothetical protein 932 39.67 0 974602..974964 + 120 108563356 - HPAG1_0931 - hypothetical protein 933 35.40 -1 975377..976390 - 337 108563357 - HPAG1_0932 - hypothetical protein 934 36.64 0 976400..976852 - 150 108563358 - HPAG1_0933 - SPOUT methyltransferase superfamily protein 935 42.76 0 976866..977735 - 289 108563359 - HPAG1_0934 - acetyl-CoA carboxylase subunit beta 936 38.86 0 977816..978430 + 204 108563360 - HPAG1_0935 - hypothetical protein 937 39.57 0 978441..979097 + 218 108563361 - HPAG1_0936 - hypothetical protein 938 39.68 0 979100..979666 - 188 108563362 - HPAG1_0937 - hypothetical protein 939 40.92 0 979731..980363 - 210 108563363 - HPAG1_0938 - oxygen-insensitive NADPH nitroreductase 940 39.88 0 980374..981213 - 279 108563364 - HPAG1_0939 - prolipoprotein diacylglyceryl transferase 941 38.82 0 981223..981951 - 242 108563365 - HPAG1_0940 - hypothetical protein 942 39.00 0 981970..983151 - 393 108563366 - HPAG1_0941 - 3-deoxy-D-manno-octulosonic-acid transferase 943 37.39 0 983152..983916 - 254 108563367 - HPAG1_0942 - hypothetical protein 944 38.66 0 983926..984657 - 243 108563368 - HPAG1_0943 - hypothetical protein 945 42.03 0 984659..985555 - 298 108563369 glyQ HPAG1_0944 - glycyl-tRNA synthetase subunit alpha 946 45.05 +1 985569..986507 - 312 108563370 gpsA HPAG1_0945 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 947 37.82 0 986648..988231 - 527 108563371 - HPAG1_0946 - hypothetical protein 948 39.20 0 988228..990564 - 778 108563372 - HPAG1_0947 - hypothetical protein 949 37.52 0 990561..992087 - 508 108563373 - HPAG1_0948 - hypothetical protein 950 34.04 -1 992653..992934 - 93 108563374 - HPAG1_0949 - hypothetical protein 951 41.90 0 992950..996009 - 1019 108563375 - HPAG1_0950 - cobalt-zinc-cadmium resistance protein 952 40.09 0 996009..997088 - 359 108563376 - HPAG1_0951 - cobalt-zinc-cadmium resistance protein 953 39.12 0 997085..998380 - 431 108563377 - HPAG1_0952 - hypothetical protein 954 38.03 0 998370..1000475 - 701 108563378 glyS HPAG1_0953 - glycyl-tRNA synthetase subunit beta 955 39.69 0 1000587..1001672 + 361 108563379 - HPAG1_0954 - hypothetical protein 956 42.07 0 1001685..1003160 + 491 108563380 - HPAG1_0955 - phosphoglyceromutase 957 39.01 0 1003175..1003456 + 93 108563381 gatC HPAG1_0956 - aspartyl/glutamyl-tRNA amidotransferase subunit C 958 39.21 0 1003576..1004886 - 436 108563382 - HPAG1_0957 - adenosylmethionine--8-amino-7-oxononanoate transaminase 959 36.95 0 1005016..1006479 + 487 108563383 - HPAG1_0958 - peptidyl-prolyl cis-trans isomerase D 960 42.33 0 1006495..1007973 + 492 108563384 - HPAG1_0959 - cell division protein 961 43.87 +1 1008104..1009261 + 385 108563385 - HPAG1_0960 - cell division protein FtsZ 962 40.95 0 1009714..1009818 - 34 108563386 - HPAG1_0961 - hypothetical protein 963 37.57 0 1009929..1010117 - 62 108563387 - HPAG1_0962 - hypothetical protein 964 38.06 0 1010280..1011104 - 274 108563388 - HPAG1_0963 - hypothetical protein 965 41.15 0 1011239..1011430 - 63 108563389 - HPAG1_0964 - hypothetical protein 966 38.98 0 1012207..1012578 - 123 108563390 - HPAG1_0965 - hypothetical protein 967 38.94 0 1012641..1012961 - 106 108563391 - HPAG1_0966 - hypothetical protein 968 29.59 -2 1017340..1017606 + 88 108563392 - HPAG1_0967 - hypothetical protein 969 42.86 +1 1017993..1018433 + 146 108563393 - HPAG1_0968 - hypothetical protein 970 37.16 0 1018474..1020303 + 609 108563394 - HPAG1_0969 - hypothetical protein 971 35.37 -1 1020454..1020699 + 81 108563395 - HPAG1_0970 - hypothetical protein 972 39.97 0 1020701..1021363 + 220 108563396 - HPAG1_0971 - hypothetical protein 973 40.21 0 1021469..1023316 - 615 108563397 - HPAG1_0972 - arginine decarboxylase 974 38.03 0 1023331..1024500 - 389 108563398 - HPAG1_0973 - type 1 capsular polysaccharide biosynthesis protein J 975 38.46 0 1024505..1024933 - 142 108563399 - HPAG1_0974 - hypothetical protein 976 37.53 0 1024950..1025735 - 261 108563400 - HPAG1_0975 - hypothetical protein 977 36.18 0 1025739..1026758 - 339 108563401 - HPAG1_0976 - hypothetical protein 978 38.35 0 1026759..1028690 - 643 108563402 - HPAG1_0977 - methionyl-tRNA synthetase 979 41.45 0 1028860..1030029 + 389 108563403 - HPAG1_0978 - cyclopropane fatty acid synthase 980 37.66 0 1030032..1031903 - 623 108563404 - HPAG1_0979 - hypothetical protein 981 31.31 -2 1032378..1032476 - 32 108563405 - HPAG1_0980 - hypothetical protein 982 51.47 +2 1032502..1032705 + 67 108563406 - HPAG1_0981 - hypothetical protein 983 37.33 0 1033136..1033885 - 249 108563407 - HPAG1_0982 - putative neuraminyllactose-binding hemagglutinin-like protein 984 41.58 0 1033970..1035496 - 508 108563408 guaA HPAG1_0983 - bifunctional GMP synthase/glutamine amidotransferase protein 985 36.20 0 1035507..1035995 - 162 108563409 - HPAG1_0984 - hypothetical protein 986 41.49 0 1036156..1038546 - 796 108563410 - HPAG1_0985 - biotin sulfoxide reductase 987 37.73 0 1038650..1039240 - 196 108563411 - HPAG1_0986 - hypothetical protein 988 41.50 0 1039266..1040588 - 440 108563412 - HPAG1_0987 - nifS-like protein 989 35.56 -1 1040607..1040921 - 104 108563413 - HPAG1_0988 - ADP hydrolase 990 41.03 0 1041003..1041989 + 328 108563414 pheS HPAG1_0989 - phenylalanyl-tRNA synthetase subunit alpha 991 39.39 0 1041989..1044283 + 764 108563415 pheT HPAG1_0990 - phenylalanyl-tRNA synthetase subunit beta 992 39.53 0 1044287..1045576 + 429 108563416 - HPAG1_0991 - 3-phosphoshikimate 1-carboxyvinyltransferase 993 39.52 0 1045566..1046390 + 274 108563417 ispH HPAG1_0992 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 994 40.45 0 1046511..1048181 + 556 108563418 rpsA HPAG1_0993 - 30S ribosomal protein S1 995 35.34 -1 1048210..1048758 + 182 108563419 - HPAG1_0994 - hypothetical protein 996 40.63 0 1048774..1050348 + 524 108563420 - HPAG1_0995 - D-3-phosphoglycerate dehydrogenase 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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