version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 789 38.10 0 825304..826143 - 279 108563213 - HPAG1_0788 - hypothetical protein 790 41.16 0 826230..827264 - 344 108563214 - HPAG1_0789 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 791 36.16 0 827458..828342 - 294 108563215 - HPAG1_0790 - lipooligosaccharide 5G8 epitope biosynthesis-associated protein 792 37.04 0 828391..829011 + 206 108563216 - HPAG1_0791 - hypothetical protein 793 42.16 0 829014..831392 - 792 108563217 - HPAG1_0792 - iron(III) dicitrate transport protein 794 39.72 0 831590..831949 - 119 108563218 acpS HPAG1_0793 - 4'-phosphopantetheinyl transferase 795 38.41 0 831956..832507 - 183 108563219 fliL HPAG1_0794 - flagellar basal body-associated protein FliL 796 36.65 0 832516..833118 - 200 108563220 - HPAG1_0795 - hypothetical protein 797 34.25 -1 833097..833423 - 108 108563221 - HPAG1_0796 - hypothetical protein 798 38.18 0 833888..834898 - 336 108563222 - HPAG1_0797 - hypothetical protein 799 39.00 0 835032..835649 + 205 108563223 - HPAG1_0798 - hypothetical protein 800 41.02 0 835650..836417 + 255 108563224 - HPAG1_0799 - thiamine biosynthesis protein 801 43.80 +1 836433..837206 + 257 108563225 - HPAG1_0800 - flagellar motor protein MotA 802 41.34 0 837209..837982 + 257 108563226 motB HPAG1_0801 - flagellar motor protein MotB 803 41.83 0 837979..838425 + 148 108563227 - HPAG1_0802 - hypothetical protein 804 36.36 0 838485..838616 + 43 108563228 - HPAG1_0803 - osmoprotection protein 805 40.42 0 838618..840156 + 512 108563229 - HPAG1_0804 - osmoprotection protein 806 38.94 0 840158..840799 + 213 108563230 - HPAG1_0805 - osmoprotection protein 807 35.28 -1 840982..841443 + 153 108563231 - HPAG1_0806 - hypothetical protein 808 37.87 0 841444..843228 + 594 108563232 uvrC HPAG1_0807 - excinuclease ABC subunit C 809 41.07 0 843239..844504 + 421 108563233 - HPAG1_0808 - homoserine dehydrogenase 810 34.78 -1 844504..844848 + 114 108563234 - HPAG1_0809 - hypothetical protein 811 38.63 0 844937..845257 + 106 108563235 - HPAG1_0810 - thioredoxin 812 44.66 +1 845262..846197 + 311 108563236 - HPAG1_0811 - thioredoxin reductase 813 39.42 0 846407..847228 + 273 108563237 - HPAG1_0812 - beta-1,4-galactosyltransferase 814 37.75 0 847431..847679 - 82 108563238 - HPAG1_0813 - RNA binding protein 815 41.26 0 848002..848682 - 226 108563239 - HPAG1_0814 - F0F1 ATP synthase subunit A 816 44.26 +1 848804..850249 - 481 108563240 - HPAG1_0815 - inositol-5-monophosphate dehydrogenase 817 43.32 +1 850259..851620 - 453 108563241 gatA HPAG1_0816 - aspartyl/glutamyl-tRNA amidotransferase subunit A 818 38.41 0 851680..852270 - 196 108563242 coaE HPAG1_0817 - dephospho-CoA kinase 819 35.99 0 852272..853060 - 262 108563243 speE HPAG1_0818 - spermidine synthase 820 34.58 -1 853152..854036 - 294 108563244 - HPAG1_0819 - hypothetical protein 821 39.97 0 854113..855498 + 461 108563245 engA HPAG1_0820 - GTP-binding protein EngA 822 41.40 0 855640..855924 + 94 108563246 - HPAG1_0821 - DNA-binding protein HU 823 46.24 +1 856513..857124 + 203 108563247 - HPAG1_0822 - hypothetical protein 824 38.03 0 857144..857761 + 205 108563248 - HPAG1_0823 - hypothetical protein 825 44.67 +1 857758..859521 + 587 108563249 - HPAG1_0824 - outer membrane protein P1 826 43.19 +1 859527..860510 + 327 108563250 - HPAG1_0825 - UDP-GlcNAc C6 dehydratase 827 39.36 0 860507..861784 + 425 108563251 - HPAG1_0826 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 828 37.80 0 861784..862521 + 245 108563252 - HPAG1_0827 - hypothetical protein 829 42.27 0 862576..863235 - 219 108563253 - HPAG1_0828 - thiamine phosphate pyrophosphorylase 830 43.09 +1 863228..864037 - 269 108563254 - HPAG1_0829 - thiamine biosynthesis protein 831 42.66 0 864034..864816 - 260 108563255 - HPAG1_0830 - hydroxyethylthiazole kinase 832 37.25 0 864901..867912 - 1003 108563256 - HPAG1_0831 - type I restriction enzyme R protein 833 37.29 0 868049..869287 - 412 108563257 - HPAG1_0832 - HP0790-like protein 834 41.01 0 869298..870821 - 507 108563258 - HPAG1_0833 - type I restriction enzyme M protein 835 41.63 0 871053..871739 + 228 108563259 - HPAG1_0834 - hypothetical protein 836 38.85 0 871762..872160 - 132 108563260 - HPAG1_0835 - hypothetical protein 837 37.41 0 872157..872696 - 179 108563261 - HPAG1_0836 - hypothetical protein 838 41.64 0 872693..874294 - 533 108563262 - HPAG1_0837 - ABC transporter, ATP-binding protein 839 41.92 0 874492..875469 + 325 108563263 - HPAG1_0838 - guanosine 5'-monophosphate oxidoreductase 840 30.81 -2 875466..875663 - 65 108563264 - HPAG1_0839 - hypothetical protein 841 41.11 0 875635..876213 - 192 108563265 - HPAG1_0840 - phosphoheptose isomerase 842 41.31 0 876206..877597 - 463 108563266 - HPAG1_0841 - ADP-heptose synthase 843 38.67 0 877594..878586 - 330 108563267 - HPAG1_0842 - ADP-L-glycero-D-mannoheptose-6-epimerase 844 35.63 0 878595..879116 - 173 108563268 - HPAG1_0843 - hypothetical protein 845 41.57 0 879106..879846 - 246 108563269 - HPAG1_0844 - hypothetical protein 846 39.43 0 879837..880508 - 223 108563270 - HPAG1_0845 - pantothenate kinase 847 37.45 0 880513..882189 - 558 108563271 - HPAG1_0846 - hypothetical protein 848 35.01 -1 882191..882847 - 218 108563272 - HPAG1_0847 - hypothetical protein 849 42.69 0 882844..883281 - 145 108563273 dut HPAG1_0848 - deoxyuridine 5'-triphosphate nucleotidohydrolase 850 38.79 0 883271..883765 - 164 108563274 greA HPAG1_0849 - transcription elongation factor GreA 851 38.69 0 883806..884888 - 360 108563275 lpxB HPAG1_0850 - lipid-A-disaccharide synthase 852 34.20 -1 884888..885349 - 153 108563276 - HPAG1_0851 - hypothetical protein 853 39.55 0 885353..885706 - 117 108563277 hypA HPAG1_0852 - hydrogenase nickel incorporation protein 854 45.85 +1 885765..887921 - 718 108563278 flgE HPAG1_0853 - flagellar hook protein FlgE 855 41.77 0 888140..888874 - 244 108563279 - HPAG1_0854 - CDP-diacylglycerol pyrophosphatase 856 36.97 0 889234..889563 + 109 108563280 - HPAG1_0855 - alkylphosphonate uptake protein 857 36.11 0 889615..889830 - 71 108563281 - HPAG1_0856 - hypothetical protein 858 40.18 0 889912..890787 - 291 108563282 - HPAG1_0857 - hypothetical protein 859 42.23 0 890932..892449 - 505 108563283 - HPAG1_0858 - catalase 860 44.36 +1 892772..895147 + 791 108563284 - HPAG1_0859 - iron-regulated outer membrane protein 861 43.04 +1 895148..895621 - 157 108563285 ruvC HPAG1_0860 - Holliday junction resolvase 862 38.39 0 895752..896483 + 243 108563286 - HPAG1_0861 - hypothetical protein 863 35.06 -1 897594..898460 - 288 108563287 - HPAG1_0862 - hypothetical protein 864 39.67 0 898513..899064 - 183 108563288 ruvA HPAG1_0863 - Holliday junction DNA helicase motor protein 865 37.07 0 899090..900934 - 614 108563289 - HPAG1_0864 - hypothetical protein 866 38.32 0 901105..902487 + 460 108563290 - HPAG1_0865 - virulence factor mviN protein 867 38.84 0 902488..903885 + 465 108563291 cysS HPAG1_0866 - cysteinyl-tRNA synthetase 868 41.87 0 904115..908005 + 1296 108563292 - HPAG1_0867 - vacuolating cytotoxin 869 34.41 -1 908125..909150 - 341 108563293 - HPAG1_0868 - lipopolysaccharide 1,2-glycosyltransferase 870 39.58 0 909309..910076 - 255 108563294 - HPAG1_0869 - iron(III) dicitrate ABC transporter, ATP-binding protein 871 46.18 +1 910076..911056 - 326 108563295 - HPAG1_0870 - iron(III) dicitrate ABC transporter, permease protein 872 42.92 +1 911049..911903 - 284 108563296 - HPAG1_0871 - hypothetical protein 873 42.29 0 912043..912567 + 174 108563297 - HPAG1_0872 - hypothetical protein 874 32.96 -1 912673..912939 - 88 108563298 - HPAG1_0873 - hypothetical protein 875 34.66 -1 912920..913297 - 125 108563299 - HPAG1_0874 - hypothetical protein 876 29.95 -2 913376..913582 + 68 108563300 - HPAG1_0875 - hypothetical protein 877 45.37 +1 913627..915861 - 744 108563301 - HPAG1_0876 - outer membrane protein BabA 878 38.89 0 916338..917003 + 221 108563302 - HPAG1_0877 - hypothetical protein 879 44.29 +1 916954..918066 - 370 108563303 - HPAG1_0878 - hydrogenase expression/formation protein HypD 880 41.35 0 918084..918320 - 78 108563304 - HPAG1_0879 - hydrogenase expression/formation protein HypC 881 41.29 0 918320..919048 - 242 108563305 - HPAG1_0880 - hydrogenase expression/formation protein HypB 882 31.22 -2 919128..919316 + 62 108563306 - HPAG1_0881 - hypothetical protein 883 40.00 0 919291..919590 - 99 108563307 - HPAG1_0882 - hypothetical protein 884 39.33 0 919787..920053 - 88 108563308 - HPAG1_0883 - acetate kinase 885 41.19 0 920149..920670 - 173 108563309 - HPAG1_0884 - acetate kinase 886 44.81 +1 920685..921224 - 179 108563310 - HPAG1_0885 - phosphotransacetylase 887 40.12 0 921268..922122 - 284 108563311 - HPAG1_0886 - phosphotransacetylase 888 42.86 +1 922109..922234 - 41 108563312 - HPAG1_0887 - phosphotransacetylase 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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