version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 646 34.51 -1 673122..674138 + 338 108563070 - HPAG1_0645 - hypothetical protein 647 40.28 0 674125..674556 + 143 108563071 rnhA HPAG1_0646 - ribonuclease H 648 40.80 0 674565..675287 + 240 108563072 rnc HPAG1_0647 - ribonuclease III 649 42.71 0 675284..676381 + 365 108563073 - HPAG1_0648 - chorismate synthase 650 34.69 -1 676419..676934 + 171 108563074 - HPAG1_0649 - hypothetical protein 651 38.86 0 676934..678307 + 457 108563075 - HPAG1_0650 - coproporphyrinogen III oxidase 652 39.71 0 678304..679605 + 433 108563076 - HPAG1_0651 - glycerol-3-phosphate dehydrogenase 653 40.67 0 679681..680334 + 217 108563077 - HPAG1_0652 - hypothetical protein 654 39.93 0 680286..684455 + 1389 108563078 - HPAG1_0653 - hypothetical protein 655 43.42 +1 684699..685511 + 270 108563079 - HPAG1_0654 - outer membrane protein HorF 656 42.63 0 685670..686842 + 390 108563080 - HPAG1_0655 - aspartate aminotransferase 657 28.50 -2 686979..687929 + 316 108563081 - HPAG1_0656 - hypothetical protein 658 28.26 -2 687947..688813 + 288 108563082 - HPAG1_0657 - hypothetical protein 659 38.47 0 688821..689891 + 356 108563083 - HPAG1_0658 - integrase-recombinase protein 660 36.29 0 689954..690460 - 168 108563084 - HPAG1_0659 - methylated-DNA--protein-cysteine methyltransferase 661 38.02 0 690464..691231 - 255 108563085 - HPAG1_0660 - hypothetical protein 662 39.87 0 691345..692292 - 315 108563086 - HPAG1_0661 - putative lipopolysaccharide biosynthesis protein 663 40.60 0 692354..694720 - 788 108563087 - HPAG1_0662 - ribonucleotide-diphosphate reductase subunit alpha 664 42.42 0 694886..695380 - 164 108563088 - HPAG1_0663 - hypothetical protein 665 43.31 +1 695420..695860 - 146 108563089 - HPAG1_0664 - hypothetical protein 666 39.64 0 696123..696629 - 168 108563090 - HPAG1_0665 - hypothetical protein 667 43.31 +1 696669..697049 - 126 108563091 - HPAG1_0666 - hypothetical protein 668 42.24 0 697205..698506 - 433 108563092 - HPAG1_0667 - UDP-N-acetylglucosamine pyrophosphorylase 669 38.42 0 698588..699334 + 248 108563093 fliP HPAG1_0668 - flagellar biosynthesis protein FliP 670 39.97 0 699373..701676 - 767 108563094 - HPAG1_0669 - iron(III) dicitrate transport protein 671 40.10 0 701927..703861 - 644 108563095 - HPAG1_0670 - iron(II) transport protein 672 38.03 0 703975..704805 + 276 108563096 - HPAG1_0671 - hypothetical protein 673 30.45 -2 704859..706073 + 404 108563097 - HPAG1_0672 - putative type II cytosine specific methyltransferase 674 26.35 -2 706076..706948 + 290 108563098 - HPAG1_0673 - putative type II restriction enzyme 675 36.11 0 707082..707441 + 119 108563099 - HPAG1_0674 - hypothetical protein 676 46.00 +1 707722..708897 + 391 108563100 - HPAG1_0675 - acetyl coenzyme A acetyltransferase 677 43.63 +1 708908..709606 + 232 108563101 - HPAG1_0676 - succinyl-CoA-transferase subunit A 678 44.55 +1 709603..710226 + 207 108563102 - HPAG1_0677 - succinyl-CoA-transferase subunit B 679 40.81 0 710245..711609 + 454 108563103 - HPAG1_0678 - short-chain fatty acids transporter 680 39.32 0 711734..712735 + 333 108563104 - HPAG1_0679 - putative outer membrane protein 681 45.33 +1 712970..715111 + 713 108563105 - HPAG1_0680 - hydantoin utilization protein A 682 43.91 +1 715123..717420 + 765 108563106 - HPAG1_0681 - N-methylhydantoinase 683 41.81 0 717431..717937 + 168 108563107 - HPAG1_0682 - hypothetical protein 684 29.69 -2 718125..718316 + 63 108563108 - HPAG1_0683 - hypothetical protein 685 37.22 0 718326..719354 + 342 108563109 - HPAG1_0684 - hypothetical protein 686 40.31 0 719347..719733 + 128 108563110 - HPAG1_0685 - diacylglycerol kinase 687 41.10 0 719749..722232 + 827 108563111 - HPAG1_0686 - DNA gyrase subunit A 688 38.57 0 722229..722705 + 158 108563112 - HPAG1_0687 - hypothetical protein 689 40.05 0 722702..723847 + 381 108563113 - HPAG1_0688 - transcriptional activator of flagella proteins 690 38.98 0 723974..724504 + 176 108563114 - HPAG1_0689 - hypothetical protein 691 40.76 0 724748..727573 - 941 108563115 uvrA HPAG1_0690 - excinuclease ABC subunit A 692 41.48 0 727738..728559 + 273 108563116 - HPAG1_0691 - outer membrane protein HopE 693 39.48 0 728737..729663 + 308 108563117 mraW HPAG1_0692 - S-adenosyl-methyltransferase MraW 694 33.62 -1 729684..730028 + 114 108563118 - HPAG1_0693 - hypothetical protein 695 43.08 +1 730184..731086 + 300 108563119 - HPAG1_0694 - hypothetical protein 696 38.22 0 731310..733313 + 667 108563120 - HPAG1_0695 - putative outer membrane protein HomB 697 39.39 0 733504..734724 + 406 108563121 - HPAG1_0696 - hypothetical protein 698 32.13 -1 734724..734972 + 82 108563122 - HPAG1_0697 - hypothetical protein 699 35.78 0 734978..735427 + 149 108563123 - HPAG1_0698 - hypothetical protein 700 35.66 0 735439..736683 - 414 108563124 - HPAG1_0699 - RNA polymerase factor sigma-54 701 41.91 0 736686..737408 - 240 108563125 - HPAG1_0700 - ABC transporter, ATP-binding protein 702 39.05 0 737421..737822 - 133 108563126 - HPAG1_0701 - hypothetical protein 703 38.45 0 737819..739537 - 572 108563127 - HPAG1_0702 - DNA polymerase III subunits gamma and tau 704 38.23 0 739606..740238 - 210 108563128 - HPAG1_0703 - hypothetical protein 705 40.95 0 740445..740930 + 161 108563129 - HPAG1_0704 - hypothetical protein 706 39.61 0 740958..741419 + 153 108563130 - HPAG1_0705 - hypothetical protein 707 40.67 0 741785..743638 + 617 108563131 - HPAG1_0706 - outer membrane protein SabB 708 44.97 +1 743705..745036 - 443 108563132 - HPAG1_0707 - anaerobic C4-dicarboxylate transporter 709 45.85 +1 745165..746163 + 332 108563133 - HPAG1_0708 - L-asparaginase II 710 41.56 0 746303..748258 - 651 108563134 - HPAG1_0709 - outer membrane protein SabA 711 40.85 0 748468..749385 - 305 108563135 - HPAG1_0710 - outer membrane protein 712 40.73 0 749355..750341 - 328 108563136 - HPAG1_0711 - transcriptional regulator 713 37.66 0 750435..751451 - 338 108563137 - HPAG1_0712 - hypothetical protein 714 33.99 -1 751487..752554 - 355 108563138 - HPAG1_0713 - hypothetical protein 715 34.64 -1 752563..752868 - 101 108563139 - HPAG1_0714 - hypothetical protein 716 37.11 0 752960..754678 - 572 108563140 - HPAG1_0715 - hypothetical protein 717 32.94 -1 754675..755430 - 251 108563141 - HPAG1_0716 - hypothetical protein 718 34.56 -1 755492..756550 - 352 108563142 - HPAG1_0717 - hypothetical protein 719 41.52 0 756637..757956 - 439 108563143 - HPAG1_0718 - hypothetical protein 720 38.96 0 757958..758419 - 153 108563144 - HPAG1_0719 - xanthine guanine phosphoribosyl transferase 721 42.61 0 758428..759537 - 369 108563145 - HPAG1_0720 - phosphoserine aminotransferase 722 40.04 0 759687..760163 + 158 108563146 - HPAG1_0721 - phosphatidylglycerophosphatase A 723 35.06 -1 760241..761284 + 347 108563147 ddl HPAG1_0722 - D-alanyl-alanine synthetase A 724 36.64 0 761284..762009 + 241 108563148 - HPAG1_0723 - 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 725 38.60 0 761996..763477 + 493 108563149 - HPAG1_0724 - UDP-MurNac-pentapeptide presynthetase 726 39.51 0 763487..763972 + 161 108563150 - HPAG1_0725 - histidine triad (HIT) family protein 727 44.83 +1 764037..764993 + 318 108563151 - HPAG1_0726 - ribose-phosphate pyrophosphokinase 728 40.31 0 765054..766199 - 381 108563152 - HPAG1_0727 - rod shape-determining protein 729 42.03 0 766222..766842 - 206 108563153 - HPAG1_0728 - hypothetical protein 730 37.06 0 766980..767435 - 151 108563154 - HPAG1_0729 - hypothetical protein 731 38.52 0 767571..768554 + 327 108563155 - HPAG1_0730 - hypothetical protein 732 40.71 0 768505..769764 + 419 108563156 - HPAG1_0731 - hypothetical protein 733 34.69 -1 769775..770956 + 393 108563157 trmB HPAG1_0732 - tRNA (guanine-N(7))-methyltransferase 734 40.62 0 770953..771624 + 223 108563158 - HPAG1_0733 - cell division protein 735 34.57 -1 771611..772417 + 268 108563159 - HPAG1_0734 - cell division membrane protein 736 38.07 0 772410..773612 + 400 108563160 - HPAG1_0735 - hypothetical protein 737 40.83 0 773705..774064 + 119 108563161 - HPAG1_0736 - flagellar protein FlaG 738 42.27 0 774081..776138 + 685 108563162 fliD HPAG1_0737 - flagellar capping protein 739 39.37 0 776178..776558 + 126 108563163 fliS HPAG1_0738 - flagellar protein FliS 740 31.25 -2 776545..776784 + 79 108563164 - HPAG1_0739 - hypothetical protein 741 39.85 0 776837..777496 + 219 108563165 - HPAG1_0740 - molybdopterin biosynthesis protein 742 32.84 -1 777468..777671 + 67 108563166 - HPAG1_0741 - hypothetical protein 743 41.64 0 777675..778553 + 292 108563167 - HPAG1_0742 - carbon-nitrogen hydrolase 744 43.15 +1 778680..779993 + 437 108563168 - HPAG1_0743 - hypothetical protein 745 38.84 0 780056..781309 + 417 108563169 - HPAG1_0744 - hypothetical protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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